Protein kinases in complex with B49 (Sunitinib)

Total number of genes: 9
Total number of chains: 20
Spatial Dihedral Chains Representative
DFGin BLAminus 8 4QMZA
DFGin BLAplus 1 3MIYB
DFGin ABAminus 2 6NFYB
DFGin BLBminus 1 3TI1A
DFGin None 2 6NG0A
DFGout BBAminus 4 4AGDA
DFGout None 2 3G0EA
All chains
Pymol session(ver 2.3) Pymol script
All chains - renumbered by
Uniprot PDB Alignment
Database table as tsv
Group Gene UniprotID Protein PDB Resolu Activity Label Spatial Label Dihedral Label Chelix-SaltBridge ActLoopNT-ActLoopCT Ligand Type
CAMK PHKG2 PHKG2_HUMAN Phosphorylase b kinase gamma catalytic chain, liver/testis isoform 2Y7JA 2.5 Inactive DFGin BLAminus out-out in-in B49 Type1
CAMK PHKG2 PHKG2_HUMAN Phosphorylase b kinase gamma catalytic chain, liver/testis isoform 2Y7JB 2.5 Inactive DFGin BLAminus out-out in-in B49 Type1
CAMK PHKG2 PHKG2_HUMAN Phosphorylase b kinase gamma catalytic chain, liver/testis isoform 2Y7JC 2.5 Inactive DFGin BLAminus out-out in-in B49 Type1
CAMK PHKG2 PHKG2_HUMAN Phosphorylase b kinase gamma catalytic chain, liver/testis isoform 2Y7JD 2.5 Inactive DFGin BLAminus out-out in-in B49 Type1
CMGC CDK2 CDK2_HUMAN Cyclin-dependent kinase 2 3TI1A 1.99 Inactive DFGin BLBminus out-out out-out B49 Type1
STE MAP4K1 M4K1_HUMAN Mitogen-activated protein kinase kinase kinase kinase 1 6NFYA 2.17 Inactive DFGin ABAminus out-out out-in B49 Type1
STE MAP4K1 M4K1_HUMAN Mitogen-activated protein kinase kinase kinase kinase 1 6NFYB 2.17 Inactive DFGin ABAminus out-out out-in B49 Type1
STE MAP4K1 M4K1_HUMAN Mitogen-activated protein kinase kinase kinase kinase 1 6NFZA 2.966 None DFGin BLAminus in-none in-in B49 Type1
STE MAP4K1 M4K1_HUMAN Mitogen-activated protein kinase kinase kinase kinase 1 6NFZB 2.966 Active DFGin BLAminus in-in in-in B49 Type1
STE MAP4K1 M4K1_HUMAN Mitogen-activated protein kinase kinase kinase kinase 1 6NG0A 2.05 Inactive DFGin None out-out out-out B49 Type1
STE MAP4K1 M4K1_HUMAN Mitogen-activated protein kinase kinase kinase kinase 1 6NG0B 2.05 Inactive DFGout BBAminus out-out out-out B49 Type1
STE PAK6 PAK6_HUMAN Serine/threonine-protein kinase PAK 6 4KS8A 1.95 Active DFGin BLAminus in-in in-in B49 Type1
STE STK24 STK24_HUMAN Serine/threonine-protein kinase 24 4QMZA 1.88 Active DFGin BLAminus in-in in-in B49 Type1
TYR ITK ITK_HUMAN Tyrosine-protein kinase ITK/TSK 3MIYB 1.67 Inactive DFGin BLAplus in-out none-none B49 Type1
TYR ITK ITK_HUMAN Tyrosine-protein kinase ITK/TSK 3MIYA 1.67 Inactive DFGin None in-out none-none B49 Type1
TYR KDR VGFR2_HUMAN Vascular endothelial growth factor receptor 2 4AGDA 2.81 Inactive DFGout BBAminus in-in out-in B49 Type1
TYR KIT KIT_HUMAN Mast/stem cell growth factor receptor Kit 3G0FA 2.6 Inactive DFGout BBAminus in-in out-in B49 Type1
TYR KIT KIT_HUMAN Mast/stem cell growth factor receptor Kit 3G0FB 2.6 Inactive DFGout BBAminus in-in out-in B49 Type1
TYR KIT KIT_HUMAN Mast/stem cell growth factor receptor Kit 3G0EA 1.6 Inactive DFGout None in-in out-in B49 Type1
TYR PDGFRA PGFRA_HUMAN Platelet-derived growth factor receptor alpha 6JOKA 3.8 Inactive DFGout None in-out out-in B49 Type1

Protein kinases in complex with B49

Total number of genes: 10
Total number of chains: 22
Spatial Dihedral Chains Representative
DFGin BLAminus 10 4QMZA
DFGin BLAplus 1 3MIYB
DFGin ABAminus 2 6NFYB
DFGin BLBminus 1 3TI1A
DFGin None 2 6NG0A
DFGout BBAminus 4 4AGDA
DFGout None 2 3G0EA
All chains
Pymol session(ver 2.3) Pymol script
All chains - renumbered by
Uniprot PDB Alignment
Database table as tsv
Organism Group Gene UniprotID Protein PDB Resolu Activity Label Spatial Label Dihedral Label Chelix-SaltBridge ActLoopNT-ActLoopCT Ligand Type
Homo sapiens CAMK PHKG2 PHKG2_HUMAN Phosphorylase b kinase gamma catalytic chain, liver/testis isoform 2Y7JA 2.5 Inactive DFGin BLAminus out-out in-in B49 Type1
Homo sapiens CAMK PHKG2 PHKG2_HUMAN Phosphorylase b kinase gamma catalytic chain, liver/testis isoform 2Y7JB 2.5 Inactive DFGin BLAminus out-out in-in B49 Type1
Homo sapiens CAMK PHKG2 PHKG2_HUMAN Phosphorylase b kinase gamma catalytic chain, liver/testis isoform 2Y7JC 2.5 Inactive DFGin BLAminus out-out in-in B49 Type1
Homo sapiens CAMK PHKG2 PHKG2_HUMAN Phosphorylase b kinase gamma catalytic chain, liver/testis isoform 2Y7JD 2.5 Inactive DFGin BLAminus out-out in-in B49 Type1
Homo sapiens CMGC CDK2 CDK2_HUMAN Cyclin-dependent kinase 2 3TI1A 1.99 Inactive DFGin BLBminus out-out out-out B49 Type1
Homo sapiens STE MAP4K1 M4K1_HUMAN Mitogen-activated protein kinase kinase kinase kinase 1 6NFYA 2.17 Inactive DFGin ABAminus out-out out-in B49 Type1
Homo sapiens STE MAP4K1 M4K1_HUMAN Mitogen-activated protein kinase kinase kinase kinase 1 6NFYB 2.17 Inactive DFGin ABAminus out-out out-in B49 Type1
Homo sapiens STE MAP4K1 M4K1_HUMAN Mitogen-activated protein kinase kinase kinase kinase 1 6NFZA 2.966 None DFGin BLAminus in-none in-in B49 Type1
Homo sapiens STE MAP4K1 M4K1_HUMAN Mitogen-activated protein kinase kinase kinase kinase 1 6NFZB 2.966 Active DFGin BLAminus in-in in-in B49 Type1
Homo sapiens STE MAP4K1 M4K1_HUMAN Mitogen-activated protein kinase kinase kinase kinase 1 6NG0A 2.05 Inactive DFGin None out-out out-out B49 Type1
Homo sapiens STE MAP4K1 M4K1_HUMAN Mitogen-activated protein kinase kinase kinase kinase 1 6NG0B 2.05 Inactive DFGout BBAminus out-out out-out B49 Type1
Homo sapiens STE PAK6 PAK6_HUMAN Serine/threonine-protein kinase PAK 6 4KS8A 1.95 Active DFGin BLAminus in-in in-in B49 Type1
Homo sapiens STE STK24 STK24_HUMAN Serine/threonine-protein kinase 24 4QMZA 1.88 Active DFGin BLAminus in-in in-in B49 Type1
Homo sapiens TYR ITK ITK_HUMAN Tyrosine-protein kinase ITK/TSK 3MIYB 1.67 Inactive DFGin BLAplus in-out none-none B49 Type1
Homo sapiens TYR ITK ITK_HUMAN Tyrosine-protein kinase ITK/TSK 3MIYA 1.67 Inactive DFGin None in-out none-none B49 Type1
Homo sapiens TYR KDR VGFR2_HUMAN Vascular endothelial growth factor receptor 2 4AGDA 2.81 Inactive DFGout BBAminus in-in out-in B49 Type1
Homo sapiens TYR KIT KIT_HUMAN Mast/stem cell growth factor receptor Kit 3G0FA 2.6 Inactive DFGout BBAminus in-in out-in B49 Type1
Homo sapiens TYR KIT KIT_HUMAN Mast/stem cell growth factor receptor Kit 3G0FB 2.6 Inactive DFGout BBAminus in-in out-in B49 Type1
Homo sapiens TYR KIT KIT_HUMAN Mast/stem cell growth factor receptor Kit 3G0EA 1.6 Inactive DFGout None in-in out-in B49 Type1
Homo sapiens TYR PDGFRA PGFRA_HUMAN Platelet-derived growth factor receptor alpha 6JOKA 3.8 Inactive DFGout None in-out out-in B49 Type1
Sus scrofa OTHER RNASEL A5H025_PIG Ribonuclease L 6M11a 2.46 Active DFGin BLAminus in-in in-none 25A B49 Allosteric Type1
Sus scrofa OTHER RNASEL A5H025_PIG Ribonuclease L 6M11b 2.46 Active DFGin BLAminus in-in in-none 25A B49 Allosteric Type1

Protein kinases in complex with B49

Total number of genes: 1
Total number of chains: 2
Spatial Dihedral Chains Representative
DFGin BLAminus 2 6M11b
All chains
Pymol session(ver 2.3) Pymol script
All chains - renumbered by
Uniprot PDB Alignment
Database table as tsv

Organism Group Gene UniprotID Protein PDB Resolu Activity Label Spatial Label Dihedral Label Chelix-SaltBridge ActLoopNT-ActLoopCT Ligand Type
Sus scrofa OTHER RNASEL A5H025_PIG Ribonuclease L 6M11a 2.46 Active DFGin BLAminus in-in in-none 25A B49 Allosteric Type1
Sus scrofa OTHER RNASEL A5H025_PIG Ribonuclease L 6M11b 2.46 Active DFGin BLAminus in-in in-none 25A B49 Allosteric Type1