Ligand: 324

Total number of chains: 12
Active chains: 0
Total number of genes: 2
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAplus 4 33.3% 4WO5A
DFGin BLBplus 3 25.0% 9O0UA
DFGin BLAminus 2 16.7% 9O0UG
DFGin BLBminus 2 16.7% 9O0UC
DFGout None 1 8.3% 3C4CB
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
TKL BRAF BRAF_HUMAN 4WO5A P15056 448 721 766.0 324:801 Type1.5_Back Inactive DFGin 6.1967 12.4707 BLAplus -113.39, 171.89 60.4, 25.87 -88.62, -20.81 62.14, 83.22 -76.85, 162.27 out-out out 11.8547 Saltbr-out 10.9471 HRD-in -61.99, -45.91 75.82, -24.69 out-out-out SNCooo out-out ActLoopNT-out 6.8017 ActLoopCT-out nonTYR APEdihe_aaooo APEdist_iooo APE10-dihe-na -106.86, 132.67 APE9-dihe-na -94.97, 98.91 APE8-dihe-out -154.69, -103.68 APE8-rot-out 172.98 APE67-dihe-out -59.88, -33.44 59.76, -29.06 APE12-dist-in 13.6607 APE11-dist-out 17.6142 APE10-dist-out 20.6455 APE9-dist-out 12.3385 I543A,I544S,I551K,Q562R,L588N,K630S,F667E,Y673S,A688R,L706S,Q709R,S713E,L716E,S720E,P722S,K723G None None XRAY 2.83 0.196 0.26 A 300.0 266.0 8 30 26 4 [[457, 716]] 1.0 4wo5 TKL_BRAF_HUMAN TKL 5.9e-84 287.7 4.0 267.0 264.0 593 594 595 597 599 483 501 505 573 575 574 576.0 638 623 618 617 616 615 614 613 612 530 Serine/threonine-protein kinase B-raf
TKL BRAF BRAF_HUMAN 4WO5B P15056 450 721 766.0 324:801 Type1.5_Back Inactive DFGin 6.8875 12.8666 BLAplus -140.91, 168.85 84.0, 47.56 -114.71, 82.32 38.72, 99.17 -44.17, -77.3 out-none out 11.966 Saltbr-none 999.0 HRD-in -57.15, -60.67 87.46, -19.9 none-out-out SNCnoo out-out ActLoopNT-out 9.2447 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_nnno APE10-dihe-na 999.0, 999.0 APE9-dihe-na 999.0, -63.37 APE8-dihe-in -130.43, 79.93 APE8-rot-in 273.2 APE67-dihe-in -55.15, -30.0 -52.46, -34.18 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-none 999.0 APE9-dist-out 9.1889 I543A,I544S,I551K,Q562R,L588N,K630S,F667E,Y673S,A688R,L706S,Q709R,S713E,L716E,S720E,P722S,K723G None None XRAY 2.83 0.196 0.26 B 300.0 257.0 15 30 15 15 [[457, 716]] 1.0 4wo5 TKL_BRAF_HUMAN TKL 5.9e-84 287.7 4.0 267.0 264.0 593 594 595 597 599 483 501 505 573 575 574 576.0 638 623 618 617 616 615 614 613 612 530 Serine/threonine-protein kinase B-raf
TKL BRAF BRAF_HUMAN 3C4CA P15056 448 721 766.0 324:60002 Type1.5_Back Inactive DFGin 5.6382 13.5468 BLBplus -139.33, -169.83 64.62, 39.85 -103.64, 171.83 60.3, 95.42 83.99, 999.0 out-out out 11.62 Saltbr-out 8.6927 HRD-in -73.87, -57.97 102.26, -19.82 out-none-out SNCono none-out ActLoopNT-none 999.0 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_nnno APE10-dihe-na 999.0, -163.04 APE9-dihe-na -121.17, -138.04 APE8-dihe-in -92.13, 91.4 APE8-rot-out 47.35 APE67-dihe-in -63.77, -25.31 -68.49, -17.72 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-none 999.0 APE9-dist-out 9.5495 I543A,I544S,I551K,Q562R,L588N,K630S,F667E,Y673S,A688R,L706S,Q709R,S713E,L716E,S720E None None XRAY 2.57 0.261 0.303 A 280.0 257.0 17 30 13 17 [[457, 716]] 1.0 3c4c TKL_BRAF_HUMAN TKL 4.5e-84 288.0 4.0 267.0 264.0 593 594 595 597 599 483 501 505 573 575 574 576.0 638 623 618 617 616 615 614 613 612 530 Serine/threonine-protein kinase B-raf
TKL BRAF BRAF_HUMAN 3C4CB P15056 448 721 766.0 324:60003 Type1.5_Back Inactive DFGout 17.1214 11.4744 None -158.07, 167.38 -86.45, 172.73 27.7, 999.0 226.78, 93.67 999.0, 999.0 in-out in 9.6714 Saltbr-out 7.076 HRD-in -64.15, -34.82 70.63, -1.96 out-none-out SNCono none-out ActLoopNT-none 999.0 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_nnno APE10-dihe-na 999.0, 56.1 APE9-dihe-na 175.12, 83.72 APE8-dihe-in -104.65, 152.29 APE8-rot-in 256.49 APE67-dihe-in -58.95, -27.9 -70.54, -27.24 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-none 999.0 APE9-dist-out 8.7292 I543A,I544S,I551K,Q562R,L588N,K630S,F667E,Y673S,A688R,L706S,Q709R,S713E,L716E,S720E None None XRAY 2.57 0.261 0.303 B 280.0 256.0 18 30 12 18 [[457, 716]] 1.0 3c4c TKL_BRAF_HUMAN TKL 4.5e-84 288.0 4.0 267.0 264.0 593 594 595 597 599 483 501 505 573 575 574 576.0 638 623 618 617 616 615 614 613 612 530 Serine/threonine-protein kinase B-raf
TKL RAF1 RAF1_HUMAN 9O0UG P04049 341 614 648.0 324:701 Type1 Inactive DFGin 6.6427 14.5362 BLAminus -137.03, -164.72 64.05, 59.07 -91.31, 23.03 298.27, 111.42 -70.02, -22.85 in-in in 8.466 Saltbr-in 2.7929 HRD-in -67.69, -46.18 73.87, -6.26 in-in-out SNCiio in-out ActLoopNT-in 3.4083 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_iioo APE10-dihe-na -147.61, -172.9 APE9-dihe-na 96.11, -111.47 APE8-dihe-in -121.52, 159.07 APE8-rot-out 179.33 APE67-dihe-in -61.77, -27.13 -108.62, -7.48 APE12-dist-in 9.3284 APE11-dist-in 9.0351 APE10-dist-out 10.4777 APE9-dist-out 9.744 Y340D,Y341D None None XRAY 2.91 0.232 0.264 G 280.0 265.0 9 30 21 9 [[349, 608]] 1.0 9o0u TKL_RAF1_HUMAN TKL 2.6e-81 279.0 3.0 266.0 264.0 485 486 487 489 491 375 393 397 465 467 466 468.0 530 515 510 509 508 507 506 505 504 422 RAF proto-oncogene serine/threonine-protein kinase
TKL RAF1 RAF1_HUMAN 9O0VG P04049 341 614 648.0 324:701 Type1 Inactive DFGin 6.6518 14.5256 BLAminus -136.91, -164.75 63.88, 58.79 -91.51, 23.22 298.64, 111.76 -69.75, -22.63 in-in in 8.5288 Saltbr-in 2.8267 HRD-in -68.13, -46.19 73.7, -5.88 in-in-out SNCiio in-out ActLoopNT-in 3.3624 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_iioo APE10-dihe-na -144.93, -171.41 APE9-dihe-na 95.72, -110.34 APE8-dihe-in -121.89, 159.4 APE8-rot-out 179.42 APE67-dihe-in -62.17, -27.08 -108.22, -7.65 APE12-dist-in 9.3788 APE11-dist-in 8.988 APE10-dist-out 10.4038 APE9-dist-out 9.6609 Y340D,Y341D None None XRAY 3.5 0.208 0.254 G 280.0 265.0 9 30 21 9 [[349, 608]] 1.0 9o0v TKL_RAF1_HUMAN TKL 2.6e-81 279.0 3.0 266.0 264.0 485 486 487 489 491 375 393 397 465 467 466 468.0 530 515 510 509 508 507 506 505 504 422 RAF proto-oncogene serine/threonine-protein kinase
TKL RAF1 RAF1_HUMAN 9O0UE P04049 339 613 648.0 324:701 Type1.5_Back Inactive DFGin 5.9555 13.4189 BLAplus -138.96, -169.14 62.02, 34.27 -105.27, 31.97 55.75, 93.21 -64.59, -47.5 out-none out 11.6319 Saltbr-none 999.0 HRD-in -66.55, -46.99 72.02, -8.83 none-none-out SNCnno none-out ActLoopNT-none 999.0 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_nnno APE10-dihe-na 999.0, 999.0 APE9-dihe-na 999.0, -79.43 APE8-dihe-in -132.83, 160.57 APE8-rot-out 180.68 APE67-dihe-in -62.16, -27.71 -107.14, -6.5 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-none 999.0 APE9-dist-out 9.74 Y340D,Y341D None None XRAY 2.91 0.232 0.264 E 280.0 258.0 17 30 13 17 [[349, 608]] 1.0 9o0u TKL_RAF1_HUMAN TKL 2.6e-81 279.0 3.0 266.0 264.0 485 486 487 489 491 375 393 397 465 467 466 468.0 530 515 510 509 508 507 506 505 504 422 RAF proto-oncogene serine/threonine-protein kinase
TKL RAF1 RAF1_HUMAN 9O0VE P04049 339 613 648.0 324:701 Type1.5_Back Inactive DFGin 5.8024 13.3404 BLAplus -138.88, -169.03 61.87, 34.79 -104.64, 32.35 56.09, 93.36 -64.43, -47.67 out-none out 11.5845 Saltbr-none 999.0 HRD-in -66.6, -47.0 72.05, -8.97 none-none-out SNCnno none-out ActLoopNT-none 999.0 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_iioo APE10-dihe-na 56.8, 24.32 APE9-dihe-na -101.33, -80.31 APE8-dihe-in -132.61, 160.7 APE8-rot-out 180.75 APE67-dihe-in -62.26, -27.57 -106.96, -6.66 APE12-dist-in 11.2624 APE11-dist-in 9.0411 APE10-dist-out 12.024 APE9-dist-out 9.4519 Y340D,Y341D None None XRAY 3.5 0.208 0.254 E 280.0 261.0 14 30 16 14 [[349, 608]] 1.0 9o0v TKL_RAF1_HUMAN TKL 2.6e-81 279.0 3.0 266.0 264.0 485 486 487 489 491 375 393 397 465 467 466 468.0 530 515 510 509 508 507 506 505 504 422 RAF proto-oncogene serine/threonine-protein kinase
TKL RAF1 RAF1_HUMAN 9O0UC P04049 339 614 648.0 324:701 Type1 Inactive DFGin 6.4118 14.92 BLBminus -135.2, -162.93 65.39, 47.79 -89.17, 153.49 305.13, 119.24 148.83, -36.3 in-in in 8.1119 Saltbr-in 3.1081 HRD-in -65.51, -42.52 74.23, -8.63 in-in-out SNCiio in-out ActLoopNT-in 3.2736 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_nnoo APE10-dihe-na 999.0, -140.95 APE9-dihe-na 87.04, -108.57 APE8-dihe-in -126.35, 163.82 APE8-rot-out 179.91 APE67-dihe-in -66.05, -28.24 -108.28, -15.46 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-out 9.537 APE9-dist-out 7.8436 Y340D,Y341D None None XRAY 2.91 0.232 0.264 C 280.0 264.0 12 30 18 12 [[349, 608]] 1.0 9o0u TKL_RAF1_HUMAN TKL 2.6e-81 279.0 3.0 266.0 264.0 485 486 487 489 491 375 393 397 465 467 466 468.0 530 515 510 509 508 507 506 505 504 422 RAF proto-oncogene serine/threonine-protein kinase
TKL RAF1 RAF1_HUMAN 9O0VC P04049 339 614 648.0 324:701 Type1 Inactive DFGin 6.507 14.8484 BLBminus -135.62, -163.14 65.12, 48.02 -88.94, 153.23 304.77, 118.58 148.73, -35.99 in-in in 8.1644 Saltbr-in 3.3442 HRD-in -65.49, -42.82 73.84, -8.92 in-in-out SNCiio in-out ActLoopNT-in 3.3433 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_nnoo APE10-dihe-na 999.0, -150.01 APE9-dihe-na 93.34, -107.4 APE8-dihe-in -126.38, 163.35 APE8-rot-out 180.01 APE67-dihe-in -65.89, -28.16 -108.44, -15.01 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-out 9.4019 APE9-dist-out 7.9115 Y340D,Y341D None None XRAY 3.5 0.208 0.254 C 280.0 264.0 12 30 18 12 [[349, 608]] 1.0 9o0v TKL_RAF1_HUMAN TKL 2.6e-81 279.0 3.0 266.0 264.0 485 486 487 489 491 375 393 397 465 467 466 468.0 530 515 510 509 508 507 506 505 504 422 RAF proto-oncogene serine/threonine-protein kinase
TKL RAF1 RAF1_HUMAN 9O0UA P04049 339 612 648.0 324:701 Type1.5_Back Inactive DFGin 5.49 13.4253 BLBplus -137.77, -168.21 60.54, 23.67 -97.39, 164.85 62.85, 94.03 74.33, 173.3 out-none out 11.6361 Saltbr-none 999.0 HRD-in -67.32, -47.26 72.53, -10.19 none-out-out SNCnoo out-out ActLoopNT-out 8.5215 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_oooo APE10-dihe-na -79.91, 164.26 APE9-dihe-na 133.94, -179.25 APE8-dihe-in -151.13, 161.47 APE8-rot-out 181.14 APE67-dihe-in -63.28, -28.75 -107.76, -7.41 APE12-dist-out 21.2876 APE11-dist-out 15.3594 APE10-dist-out 15.2178 APE9-dist-out 10.0158 Y340D,Y341D None None XRAY 2.91 0.232 0.264 A 280.0 267.0 7 30 23 7 [[349, 608]] 1.0 9o0u TKL_RAF1_HUMAN TKL 2.6e-81 279.0 3.0 266.0 264.0 485 486 487 489 491 375 393 397 465 467 466 468.0 530 515 510 509 508 507 506 505 504 422 RAF proto-oncogene serine/threonine-protein kinase
TKL RAF1 RAF1_HUMAN 9O0VA P04049 339 612 648.0 324:701 Type1.5_Back Inactive DFGin 5.6121 13.5412 BLBplus -137.53, -168.14 60.68, 23.81 -97.37, 165.11 62.5, 93.91 74.63, 173.9 out-none out 11.5178 Saltbr-none 999.0 HRD-in -67.23, -47.12 72.36, -10.39 none-out-out SNCnoo out-out ActLoopNT-out 8.5821 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_oioo APE10-dihe-na -121.31, 23.23 APE9-dihe-na -94.2, -61.86 APE8-dihe-in -150.39, 162.26 APE8-rot-out 181.1 APE67-dihe-in -63.35, -28.52 -106.79, -7.22 APE12-dist-out 14.0563 APE11-dist-in 11.3326 APE10-dist-out 13.0181 APE9-dist-out 9.5213 Y340D,Y341D None None XRAY 3.5 0.208 0.254 A 280.0 266.0 8 30 22 8 [[349, 608]] 1.0 9o0v TKL_RAF1_HUMAN TKL 2.6e-81 279.0 3.0 266.0 264.0 485 486 487 489 491 375 393 397 465 467 466 468.0 530 515 510 509 508 507 506 505 504 422 RAF proto-oncogene serine/threonine-protein kinase

Ligand: 324

Total number of chains: 12
Active chains: 0
Total number of genes: 2
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAplus 4 33.3% 4WO5A
DFGin BLBplus 3 25.0% 9O0UA
DFGin BLAminus 2 16.7% 9O0UG
DFGin BLBminus 2 16.7% 9O0UC
DFGout None 1 8.3% 3C4CB
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
TKL BRAF BRAF_HUMAN 4WO5A P15056 448 721 766.0 324:801 Type1.5_Back Inactive DFGin 6.1967 12.4707 BLAplus -113.39, 171.89 60.4, 25.87 -88.62, -20.81 62.14, 83.22 -76.85, 162.27 out-out out 11.8547 Saltbr-out 10.9471 HRD-in -61.99, -45.91 75.82, -24.69 out-out-out SNCooo out-out ActLoopNT-out 6.8017 ActLoopCT-out nonTYR APEdihe_aaooo APEdist_iooo APE10-dihe-na -106.86, 132.67 APE9-dihe-na -94.97, 98.91 APE8-dihe-out -154.69, -103.68 APE8-rot-out 172.98 APE67-dihe-out -59.88, -33.44 59.76, -29.06 APE12-dist-in 13.6607 APE11-dist-out 17.6142 APE10-dist-out 20.6455 APE9-dist-out 12.3385 I543A,I544S,I551K,Q562R,L588N,K630S,F667E,Y673S,A688R,L706S,Q709R,S713E,L716E,S720E,P722S,K723G None None XRAY 2.83 0.196 0.26 A 300.0 266.0 8 30 26 4 [[457, 716]] 1.0 4wo5 Homo sapiens TKL_BRAF_HUMAN TKL 5.9e-84 287.7 4.0 267.0 264.0 593 594 595 597 599 483 501 505 573 575 574 576.0 638 623 618 617 616 615 614 613 612 530 Serine/threonine-protein kinase B-raf
TKL BRAF BRAF_HUMAN 4WO5B P15056 450 721 766.0 324:801 Type1.5_Back Inactive DFGin 6.8875 12.8666 BLAplus -140.91, 168.85 84.0, 47.56 -114.71, 82.32 38.72, 99.17 -44.17, -77.3 out-none out 11.966 Saltbr-none 999.0 HRD-in -57.15, -60.67 87.46, -19.9 none-out-out SNCnoo out-out ActLoopNT-out 9.2447 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_nnno APE10-dihe-na 999.0, 999.0 APE9-dihe-na 999.0, -63.37 APE8-dihe-in -130.43, 79.93 APE8-rot-in 273.2 APE67-dihe-in -55.15, -30.0 -52.46, -34.18 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-none 999.0 APE9-dist-out 9.1889 I543A,I544S,I551K,Q562R,L588N,K630S,F667E,Y673S,A688R,L706S,Q709R,S713E,L716E,S720E,P722S,K723G None None XRAY 2.83 0.196 0.26 B 300.0 257.0 15 30 15 15 [[457, 716]] 1.0 4wo5 Homo sapiens TKL_BRAF_HUMAN TKL 5.9e-84 287.7 4.0 267.0 264.0 593 594 595 597 599 483 501 505 573 575 574 576.0 638 623 618 617 616 615 614 613 612 530 Serine/threonine-protein kinase B-raf
TKL BRAF BRAF_HUMAN 3C4CA P15056 448 721 766.0 324:60002 Type1.5_Back Inactive DFGin 5.6382 13.5468 BLBplus -139.33, -169.83 64.62, 39.85 -103.64, 171.83 60.3, 95.42 83.99, 999.0 out-out out 11.62 Saltbr-out 8.6927 HRD-in -73.87, -57.97 102.26, -19.82 out-none-out SNCono none-out ActLoopNT-none 999.0 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_nnno APE10-dihe-na 999.0, -163.04 APE9-dihe-na -121.17, -138.04 APE8-dihe-in -92.13, 91.4 APE8-rot-out 47.35 APE67-dihe-in -63.77, -25.31 -68.49, -17.72 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-none 999.0 APE9-dist-out 9.5495 I543A,I544S,I551K,Q562R,L588N,K630S,F667E,Y673S,A688R,L706S,Q709R,S713E,L716E,S720E None None XRAY 2.57 0.261 0.303 A 280.0 257.0 17 30 13 17 [[457, 716]] 1.0 3c4c Homo sapiens TKL_BRAF_HUMAN TKL 4.5e-84 288.0 4.0 267.0 264.0 593 594 595 597 599 483 501 505 573 575 574 576.0 638 623 618 617 616 615 614 613 612 530 Serine/threonine-protein kinase B-raf
TKL BRAF BRAF_HUMAN 3C4CB P15056 448 721 766.0 324:60003 Type1.5_Back Inactive DFGout 17.1214 11.4744 None -158.07, 167.38 -86.45, 172.73 27.7, 999.0 226.78, 93.67 999.0, 999.0 in-out in 9.6714 Saltbr-out 7.076 HRD-in -64.15, -34.82 70.63, -1.96 out-none-out SNCono none-out ActLoopNT-none 999.0 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_nnno APE10-dihe-na 999.0, 56.1 APE9-dihe-na 175.12, 83.72 APE8-dihe-in -104.65, 152.29 APE8-rot-in 256.49 APE67-dihe-in -58.95, -27.9 -70.54, -27.24 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-none 999.0 APE9-dist-out 8.7292 I543A,I544S,I551K,Q562R,L588N,K630S,F667E,Y673S,A688R,L706S,Q709R,S713E,L716E,S720E None None XRAY 2.57 0.261 0.303 B 280.0 256.0 18 30 12 18 [[457, 716]] 1.0 3c4c Homo sapiens TKL_BRAF_HUMAN TKL 4.5e-84 288.0 4.0 267.0 264.0 593 594 595 597 599 483 501 505 573 575 574 576.0 638 623 618 617 616 615 614 613 612 530 Serine/threonine-protein kinase B-raf
TKL RAF1 RAF1_HUMAN 9O0UG P04049 341 614 648.0 324:701 Type1 Inactive DFGin 6.6427 14.5362 BLAminus -137.03, -164.72 64.05, 59.07 -91.31, 23.03 298.27, 111.42 -70.02, -22.85 in-in in 8.466 Saltbr-in 2.7929 HRD-in -67.69, -46.18 73.87, -6.26 in-in-out SNCiio in-out ActLoopNT-in 3.4083 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_iioo APE10-dihe-na -147.61, -172.9 APE9-dihe-na 96.11, -111.47 APE8-dihe-in -121.52, 159.07 APE8-rot-out 179.33 APE67-dihe-in -61.77, -27.13 -108.62, -7.48 APE12-dist-in 9.3284 APE11-dist-in 9.0351 APE10-dist-out 10.4777 APE9-dist-out 9.744 Y340D,Y341D None None XRAY 2.91 0.232 0.264 G 280.0 265.0 9 30 21 9 [[349, 608]] 1.0 9o0u Homo sapiens TKL_RAF1_HUMAN TKL 2.6e-81 279.0 3.0 266.0 264.0 485 486 487 489 491 375 393 397 465 467 466 468.0 530 515 510 509 508 507 506 505 504 422 RAF proto-oncogene serine/threonine-protein kinase
TKL RAF1 RAF1_HUMAN 9O0VG P04049 341 614 648.0 324:701 Type1 Inactive DFGin 6.6518 14.5256 BLAminus -136.91, -164.75 63.88, 58.79 -91.51, 23.22 298.64, 111.76 -69.75, -22.63 in-in in 8.5288 Saltbr-in 2.8267 HRD-in -68.13, -46.19 73.7, -5.88 in-in-out SNCiio in-out ActLoopNT-in 3.3624 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_iioo APE10-dihe-na -144.93, -171.41 APE9-dihe-na 95.72, -110.34 APE8-dihe-in -121.89, 159.4 APE8-rot-out 179.42 APE67-dihe-in -62.17, -27.08 -108.22, -7.65 APE12-dist-in 9.3788 APE11-dist-in 8.988 APE10-dist-out 10.4038 APE9-dist-out 9.6609 Y340D,Y341D None None XRAY 3.5 0.208 0.254 G 280.0 265.0 9 30 21 9 [[349, 608]] 1.0 9o0v Homo sapiens TKL_RAF1_HUMAN TKL 2.6e-81 279.0 3.0 266.0 264.0 485 486 487 489 491 375 393 397 465 467 466 468.0 530 515 510 509 508 507 506 505 504 422 RAF proto-oncogene serine/threonine-protein kinase
TKL RAF1 RAF1_HUMAN 9O0UE P04049 339 613 648.0 324:701 Type1.5_Back Inactive DFGin 5.9555 13.4189 BLAplus -138.96, -169.14 62.02, 34.27 -105.27, 31.97 55.75, 93.21 -64.59, -47.5 out-none out 11.6319 Saltbr-none 999.0 HRD-in -66.55, -46.99 72.02, -8.83 none-none-out SNCnno none-out ActLoopNT-none 999.0 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_nnno APE10-dihe-na 999.0, 999.0 APE9-dihe-na 999.0, -79.43 APE8-dihe-in -132.83, 160.57 APE8-rot-out 180.68 APE67-dihe-in -62.16, -27.71 -107.14, -6.5 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-none 999.0 APE9-dist-out 9.74 Y340D,Y341D None None XRAY 2.91 0.232 0.264 E 280.0 258.0 17 30 13 17 [[349, 608]] 1.0 9o0u Homo sapiens TKL_RAF1_HUMAN TKL 2.6e-81 279.0 3.0 266.0 264.0 485 486 487 489 491 375 393 397 465 467 466 468.0 530 515 510 509 508 507 506 505 504 422 RAF proto-oncogene serine/threonine-protein kinase
TKL RAF1 RAF1_HUMAN 9O0VE P04049 339 613 648.0 324:701 Type1.5_Back Inactive DFGin 5.8024 13.3404 BLAplus -138.88, -169.03 61.87, 34.79 -104.64, 32.35 56.09, 93.36 -64.43, -47.67 out-none out 11.5845 Saltbr-none 999.0 HRD-in -66.6, -47.0 72.05, -8.97 none-none-out SNCnno none-out ActLoopNT-none 999.0 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_iioo APE10-dihe-na 56.8, 24.32 APE9-dihe-na -101.33, -80.31 APE8-dihe-in -132.61, 160.7 APE8-rot-out 180.75 APE67-dihe-in -62.26, -27.57 -106.96, -6.66 APE12-dist-in 11.2624 APE11-dist-in 9.0411 APE10-dist-out 12.024 APE9-dist-out 9.4519 Y340D,Y341D None None XRAY 3.5 0.208 0.254 E 280.0 261.0 14 30 16 14 [[349, 608]] 1.0 9o0v Homo sapiens TKL_RAF1_HUMAN TKL 2.6e-81 279.0 3.0 266.0 264.0 485 486 487 489 491 375 393 397 465 467 466 468.0 530 515 510 509 508 507 506 505 504 422 RAF proto-oncogene serine/threonine-protein kinase
TKL RAF1 RAF1_HUMAN 9O0UC P04049 339 614 648.0 324:701 Type1 Inactive DFGin 6.4118 14.92 BLBminus -135.2, -162.93 65.39, 47.79 -89.17, 153.49 305.13, 119.24 148.83, -36.3 in-in in 8.1119 Saltbr-in 3.1081 HRD-in -65.51, -42.52 74.23, -8.63 in-in-out SNCiio in-out ActLoopNT-in 3.2736 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_nnoo APE10-dihe-na 999.0, -140.95 APE9-dihe-na 87.04, -108.57 APE8-dihe-in -126.35, 163.82 APE8-rot-out 179.91 APE67-dihe-in -66.05, -28.24 -108.28, -15.46 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-out 9.537 APE9-dist-out 7.8436 Y340D,Y341D None None XRAY 2.91 0.232 0.264 C 280.0 264.0 12 30 18 12 [[349, 608]] 1.0 9o0u Homo sapiens TKL_RAF1_HUMAN TKL 2.6e-81 279.0 3.0 266.0 264.0 485 486 487 489 491 375 393 397 465 467 466 468.0 530 515 510 509 508 507 506 505 504 422 RAF proto-oncogene serine/threonine-protein kinase
TKL RAF1 RAF1_HUMAN 9O0VC P04049 339 614 648.0 324:701 Type1 Inactive DFGin 6.507 14.8484 BLBminus -135.62, -163.14 65.12, 48.02 -88.94, 153.23 304.77, 118.58 148.73, -35.99 in-in in 8.1644 Saltbr-in 3.3442 HRD-in -65.49, -42.82 73.84, -8.92 in-in-out SNCiio in-out ActLoopNT-in 3.3433 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_nnoo APE10-dihe-na 999.0, -150.01 APE9-dihe-na 93.34, -107.4 APE8-dihe-in -126.38, 163.35 APE8-rot-out 180.01 APE67-dihe-in -65.89, -28.16 -108.44, -15.01 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-out 9.4019 APE9-dist-out 7.9115 Y340D,Y341D None None XRAY 3.5 0.208 0.254 C 280.0 264.0 12 30 18 12 [[349, 608]] 1.0 9o0v Homo sapiens TKL_RAF1_HUMAN TKL 2.6e-81 279.0 3.0 266.0 264.0 485 486 487 489 491 375 393 397 465 467 466 468.0 530 515 510 509 508 507 506 505 504 422 RAF proto-oncogene serine/threonine-protein kinase
TKL RAF1 RAF1_HUMAN 9O0UA P04049 339 612 648.0 324:701 Type1.5_Back Inactive DFGin 5.49 13.4253 BLBplus -137.77, -168.21 60.54, 23.67 -97.39, 164.85 62.85, 94.03 74.33, 173.3 out-none out 11.6361 Saltbr-none 999.0 HRD-in -67.32, -47.26 72.53, -10.19 none-out-out SNCnoo out-out ActLoopNT-out 8.5215 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_oooo APE10-dihe-na -79.91, 164.26 APE9-dihe-na 133.94, -179.25 APE8-dihe-in -151.13, 161.47 APE8-rot-out 181.14 APE67-dihe-in -63.28, -28.75 -107.76, -7.41 APE12-dist-out 21.2876 APE11-dist-out 15.3594 APE10-dist-out 15.2178 APE9-dist-out 10.0158 Y340D,Y341D None None XRAY 2.91 0.232 0.264 A 280.0 267.0 7 30 23 7 [[349, 608]] 1.0 9o0u Homo sapiens TKL_RAF1_HUMAN TKL 2.6e-81 279.0 3.0 266.0 264.0 485 486 487 489 491 375 393 397 465 467 466 468.0 530 515 510 509 508 507 506 505 504 422 RAF proto-oncogene serine/threonine-protein kinase
TKL RAF1 RAF1_HUMAN 9O0VA P04049 339 612 648.0 324:701 Type1.5_Back Inactive DFGin 5.6121 13.5412 BLBplus -137.53, -168.14 60.68, 23.81 -97.37, 165.11 62.5, 93.91 74.63, 173.9 out-none out 11.5178 Saltbr-none 999.0 HRD-in -67.23, -47.12 72.36, -10.39 none-out-out SNCnoo out-out ActLoopNT-out 8.5821 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_oioo APE10-dihe-na -121.31, 23.23 APE9-dihe-na -94.2, -61.86 APE8-dihe-in -150.39, 162.26 APE8-rot-out 181.1 APE67-dihe-in -63.35, -28.52 -106.79, -7.22 APE12-dist-out 14.0563 APE11-dist-in 11.3326 APE10-dist-out 13.0181 APE9-dist-out 9.5213 Y340D,Y341D None None XRAY 3.5 0.208 0.254 A 280.0 266.0 8 30 22 8 [[349, 608]] 1.0 9o0v Homo sapiens TKL_RAF1_HUMAN TKL 2.6e-81 279.0 3.0 266.0 264.0 485 486 487 489 491 375 393 397 465 467 466 468.0 530 515 510 509 508 507 506 505 504 422 RAF proto-oncogene serine/threonine-protein kinase

Ligand: 324

Total number of chains: 0
Active chains: 0
Total number of genes: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
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Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name