PINK1 (Serine/threonine-protein kinase PINK1, mitochondrial)

Group: OTHER
Uniprot: PINK1_HUMAN
Domain boundary: 156 - 509


Total number of chains: 1
Spatial Dihedral Chains Representative
DFGin BLAminus 1 AF-Q9BXM7-K1A
Representatives from each cluster
Pymol session(ver 2.3) Pymol script
All chains
Pymol session(ver 2.3) Pymol script
All chains - renumbered by
Uniprot PDB Alignment
Database table as tsv

PDB Resolution Activity Label Spatial Label Dihedral Label Chelix-SaltBridge ActLoopNT-ActLoopCT Ligand Type Residues in structure Mutation Phosphorylation Unresolved residues in A-loop
AF-Q9BXM7-K1A -1.0 Active DFGin BLAminus in-in in-in No_ligand No_ligand 148 - 517 None None 0

PINK1 (Serine/threonine-protein kinase PINK1, mitochondrial)

Group: OTHER
Total number of chains: 36
Spatial Dihedral Chains Representative
DFGin BLAminus 32 AF-Q9BXM7-K1A
DFGin ABAminus 2 6EQIC
DFGin None 2 7MP9A
Representatives from each cluster
Pymol session(ver 2.3) Pymol script
All chains
Pymol session(ver 2.3) Pymol script
All chains - renumbered by
Uniprot PDB Alignment
Database table as tsv

Organism UniprotID PDB Resolution Activity Label Spatial Label Dihedral Label Chelix-SaltBridge ActLoopNT-ActLoopCT Ligand Type Residues in structure Mutation Phosphorylation Unresolved residues in A-loop
Homo sapiens PINK1_HUMAN AF-Q9BXM7-K1A -1.0 Active DFGin BLAminus in-in in-in No_ligand No_ligand 148 - 517 None None 0
Pediculus humanus PINK1_PEDHC 6EQIC 3.1 Inactive DFGin ABAminus in-in in-in No_ligand No_ligand 147 - 574 None X202,X204,X305 0
Pediculus humanus PINK1_PEDHC 7T4KA 3.25 Active DFGin BLAminus in-in in-in No_ligand No_ligand 117 - 574 None X202 0
Pediculus humanus PINK1_PEDHC 7T4KB 3.25 Active DFGin BLAminus in-in in-in No_ligand No_ligand 120 - 574 None X202 0
Pediculus humanus PINK1_PEDHC 7T4LA 3.28 Active DFGin BLAminus in-in in-in No_ligand No_ligand 117 - 574 None X202 0
Pediculus humanus PINK1_PEDHC 7T4LB 3.28 Active DFGin BLAminus in-in in-in No_ligand No_ligand 120 - 574 None X202 0
Pediculus humanus PINK1_PEDHC 8UYFA 2.75 Active DFGin BLAminus in-in in-in No_ligand No_ligand 120 - 574 None X305 0
Pediculus humanus PINK1_PEDHC 8UYFB 2.75 Active DFGin BLAminus in-in in-in No_ligand No_ligand 120 - 574 None X305 0
Pediculus humanus PINK1_PEDHC 7T4MA 2.48 Inactive DFGin BLAminus in-out in-in No_ligand No_ligand 116 - 574 D357A None 0
Pediculus humanus PINK1_PEDHC 7T4MB 2.48 Active DFGin BLAminus in-in in-in No_ligand No_ligand 120 - 574 D357A None 0
Pediculus humanus PINK1_PEDHC 7T4MC 2.48 Inactive DFGin BLAminus in-out in-in No_ligand No_ligand 116 - 574 D357A None 0
Pediculus humanus PINK1_PEDHC 7T4MD 2.48 Active DFGin BLAminus in-in in-in No_ligand No_ligand 120 - 574 D357A None 0
Pediculus humanus PINK1_PEDHC 7T4ME 2.48 Inactive DFGin BLAminus in-out in-in No_ligand No_ligand 116 - 574 D357A None 0
Pediculus humanus PINK1_PEDHC 7T4MF 2.48 Active DFGin BLAminus in-in in-in No_ligand No_ligand 120 - 574 D357A None 0
Pediculus humanus PINK1_PEDHC 7T4MG 2.48 Inactive DFGin BLAminus in-out in-in No_ligand No_ligand 116 - 574 D357A None 0
Pediculus humanus PINK1_PEDHC 7T4MH 2.48 Active DFGin BLAminus in-in in-in No_ligand No_ligand 120 - 574 D357A None 0
Pediculus humanus PINK1_PEDHC 7T4MI 2.48 Inactive DFGin BLAminus in-out in-in No_ligand No_ligand 116 - 574 D357A None 0
Pediculus humanus PINK1_PEDHC 7T4MJ 2.48 Active DFGin BLAminus in-in in-in No_ligand No_ligand 120 - 574 D357A None 0
Pediculus humanus PINK1_PEDHC 7T4MK 2.48 Inactive DFGin BLAminus in-out in-in No_ligand No_ligand 116 - 574 D357A None 0
Pediculus humanus PINK1_PEDHC 7T4ML 2.48 Active DFGin BLAminus in-in in-in No_ligand No_ligand 120 - 574 D357A None 0
Pediculus humanus PINK1_PEDHC 7T4NA 2.35 Active DFGin BLAminus in-in in-in No_ligand No_ligand 116 - 574 D357A None 0
Pediculus humanus PINK1_PEDHC 7T4NB 2.35 Active DFGin BLAminus in-in in-in No_ligand No_ligand 120 - 574 D357A None 0
Pediculus humanus PINK1_PEDHC 8UYHA 2.84 Active DFGin BLAminus in-in in-in ANP Type1 115 - 574 None X305 0
Pediculus humanus PINK1_PEDHC 8UYHB 2.84 Active DFGin BLAminus in-in in-in ANP Type1 121 - 574 None X305 0
Pediculus humanus PINK1_PEDHC 8UYIA 3.13 Active DFGin BLAminus in-in in-in ADP Type1 120 - 572 None X202,X305 0
Pediculus humanus PINK1_PEDHC 8UYIB 3.13 Active DFGin BLAminus in-in in-in ADP Type1 122 - 574 None X202,X305 0
Pediculus humanus PINK1_PEDHC 7T3XA 3.53 Inactive DFGin None in-in in-in No_ligand No_ligand 119 - 573 D334A None 0
Tribolium castaneum PINK1_TRICA 5YJ9D 2.53 Inactive DFGin ABAminus in-in in-in ANP Type1 166 - 570 S205D,S377D,T386E,T530E None 0
Tribolium castaneum PINK1_TRICA 5OATA 2.78 Active DFGin BLAminus in-in in-in No_ligand No_ligand 156 - 566 None X207 0
Tribolium castaneum PINK1_TRICA 5OATB 2.78 Active DFGin BLAminus in-in in-in No_ligand No_ligand 156 - 566 None X207 0
Tribolium castaneum PINK1_TRICA 5OATC 2.78 Active DFGin BLAminus in-in in-in No_ligand No_ligand 156 - 566 None X207 0
Tribolium castaneum PINK1_TRICA 5OATD 2.78 Active DFGin BLAminus in-in in-in No_ligand No_ligand 156 - 566 None X207 0
Tribolium castaneum PINK1_TRICA 5OATE 2.78 Active DFGin BLAminus in-in in-in No_ligand No_ligand 156 - 566 None X207 0
Tribolium castaneum PINK1_TRICA 5OATF 2.78 Active DFGin BLAminus in-in in-in No_ligand No_ligand 156 - 566 None X207 0
Tribolium castaneum PINK1_TRICA 7MP8A 3.0 Active DFGin BLAminus in-in in-in No_ligand No_ligand 121 - 567 None None 0
Tribolium castaneum PINK1_TRICA 7MP9A 2.8 Inactive DFGin None in-in in-in AN2 Type1 121 - 568 None X205,X530 0

PINK1 (Serine/threonine-protein kinase PINK1, mitochondrial)

Group: OTHER
Total number of chains: 35
Spatial Dihedral Chains Representative
DFGin BLAminus 31 7T4MA
DFGin ABAminus 2 6EQIC
DFGin None 2 7MP9A
Representatives from each cluster
Pymol session(ver 2.3) Pymol script
All chains
Pymol session(ver 2.3) Pymol script
All chains - renumbered by
Uniprot PDB Alignment
Database table as tsv

Organism UniprotID PDB Resolution Activity Label Spatial Label Dihedral Label Chelix-SaltBridge ActLoopNT-ActLoopCT Ligand Type Residues in structure Mutation Phosphorylation Unresolved residues in A-loop
Pediculus humanus PINK1_PEDHC 6EQIC 3.1 Inactive DFGin ABAminus in-in in-in No_ligand No_ligand 147 - 574 None X202,X204,X305 0
Pediculus humanus PINK1_PEDHC 7T4KA 3.25 Active DFGin BLAminus in-in in-in No_ligand No_ligand 117 - 574 None X202 0
Pediculus humanus PINK1_PEDHC 7T4KB 3.25 Active DFGin BLAminus in-in in-in No_ligand No_ligand 120 - 574 None X202 0
Pediculus humanus PINK1_PEDHC 7T4LA 3.28 Active DFGin BLAminus in-in in-in No_ligand No_ligand 117 - 574 None X202 0
Pediculus humanus PINK1_PEDHC 7T4LB 3.28 Active DFGin BLAminus in-in in-in No_ligand No_ligand 120 - 574 None X202 0
Pediculus humanus PINK1_PEDHC 8UYFA 2.75 Active DFGin BLAminus in-in in-in No_ligand No_ligand 120 - 574 None X305 0
Pediculus humanus PINK1_PEDHC 8UYFB 2.75 Active DFGin BLAminus in-in in-in No_ligand No_ligand 120 - 574 None X305 0
Pediculus humanus PINK1_PEDHC 7T4MA 2.48 Inactive DFGin BLAminus in-out in-in No_ligand No_ligand 116 - 574 D357A None 0
Pediculus humanus PINK1_PEDHC 7T4MB 2.48 Active DFGin BLAminus in-in in-in No_ligand No_ligand 120 - 574 D357A None 0
Pediculus humanus PINK1_PEDHC 7T4MC 2.48 Inactive DFGin BLAminus in-out in-in No_ligand No_ligand 116 - 574 D357A None 0
Pediculus humanus PINK1_PEDHC 7T4MD 2.48 Active DFGin BLAminus in-in in-in No_ligand No_ligand 120 - 574 D357A None 0
Pediculus humanus PINK1_PEDHC 7T4ME 2.48 Inactive DFGin BLAminus in-out in-in No_ligand No_ligand 116 - 574 D357A None 0
Pediculus humanus PINK1_PEDHC 7T4MF 2.48 Active DFGin BLAminus in-in in-in No_ligand No_ligand 120 - 574 D357A None 0
Pediculus humanus PINK1_PEDHC 7T4MG 2.48 Inactive DFGin BLAminus in-out in-in No_ligand No_ligand 116 - 574 D357A None 0
Pediculus humanus PINK1_PEDHC 7T4MH 2.48 Active DFGin BLAminus in-in in-in No_ligand No_ligand 120 - 574 D357A None 0
Pediculus humanus PINK1_PEDHC 7T4MI 2.48 Inactive DFGin BLAminus in-out in-in No_ligand No_ligand 116 - 574 D357A None 0
Pediculus humanus PINK1_PEDHC 7T4MJ 2.48 Active DFGin BLAminus in-in in-in No_ligand No_ligand 120 - 574 D357A None 0
Pediculus humanus PINK1_PEDHC 7T4MK 2.48 Inactive DFGin BLAminus in-out in-in No_ligand No_ligand 116 - 574 D357A None 0
Pediculus humanus PINK1_PEDHC 7T4ML 2.48 Active DFGin BLAminus in-in in-in No_ligand No_ligand 120 - 574 D357A None 0
Pediculus humanus PINK1_PEDHC 7T4NA 2.35 Active DFGin BLAminus in-in in-in No_ligand No_ligand 116 - 574 D357A None 0
Pediculus humanus PINK1_PEDHC 7T4NB 2.35 Active DFGin BLAminus in-in in-in No_ligand No_ligand 120 - 574 D357A None 0
Pediculus humanus PINK1_PEDHC 8UYHA 2.84 Active DFGin BLAminus in-in in-in ANP Type1 115 - 574 None X305 0
Pediculus humanus PINK1_PEDHC 8UYHB 2.84 Active DFGin BLAminus in-in in-in ANP Type1 121 - 574 None X305 0
Pediculus humanus PINK1_PEDHC 8UYIA 3.13 Active DFGin BLAminus in-in in-in ADP Type1 120 - 572 None X202,X305 0
Pediculus humanus PINK1_PEDHC 8UYIB 3.13 Active DFGin BLAminus in-in in-in ADP Type1 122 - 574 None X202,X305 0
Pediculus humanus PINK1_PEDHC 7T3XA 3.53 Inactive DFGin None in-in in-in No_ligand No_ligand 119 - 573 D334A None 0
Tribolium castaneum PINK1_TRICA 5YJ9D 2.53 Inactive DFGin ABAminus in-in in-in ANP Type1 166 - 570 S205D,S377D,T386E,T530E None 0
Tribolium castaneum PINK1_TRICA 5OATA 2.78 Active DFGin BLAminus in-in in-in No_ligand No_ligand 156 - 566 None X207 0
Tribolium castaneum PINK1_TRICA 5OATB 2.78 Active DFGin BLAminus in-in in-in No_ligand No_ligand 156 - 566 None X207 0
Tribolium castaneum PINK1_TRICA 5OATC 2.78 Active DFGin BLAminus in-in in-in No_ligand No_ligand 156 - 566 None X207 0
Tribolium castaneum PINK1_TRICA 5OATD 2.78 Active DFGin BLAminus in-in in-in No_ligand No_ligand 156 - 566 None X207 0
Tribolium castaneum PINK1_TRICA 5OATE 2.78 Active DFGin BLAminus in-in in-in No_ligand No_ligand 156 - 566 None X207 0
Tribolium castaneum PINK1_TRICA 5OATF 2.78 Active DFGin BLAminus in-in in-in No_ligand No_ligand 156 - 566 None X207 0
Tribolium castaneum PINK1_TRICA 7MP8A 3.0 Active DFGin BLAminus in-in in-in No_ligand No_ligand 121 - 567 None None 0
Tribolium castaneum PINK1_TRICA 7MP9A 2.8 Inactive DFGin None in-in in-in AN2 Type1 121 - 568 None X205,X530 0