PDB: 9AYA — 2 kinases

Total number of chains: 4
Active chains: 0
Total number of genes: 2
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 50.0% 9AYAA
DFGin BLBplus 2 50.0% 9AYAB
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
STE MAP2K1 MP2K1_HUMAN 9AYAB Q02750 42 382 393.0 A1AHE:60401,ANP:60402 Type1,ATPlike Inactive DFGin 6.2091 14.117 BLBplus -156.4, 169.03 57.59, 47.08 -100.39, 159.82 46.95, 83.0 -73.48, 80.99 out-out out 15.4442 Saltbr-out 14.9574 HRD-in -72.22, -50.64 78.5, -7.92 out-out-out SNCooo out-out ActLoopNT-out 9.725 ActLoopCT-out nonTYR APEdihe_aaooo APEdist_oooo APE10-dihe-na -67.32, 133.53 APE9-dihe-na -94.07, -169.54 APE8-dihe-out -110.54, -56.8 APE8-rot-out 71.18 APE67-dihe-out -155.6, 139.89 -98.61, 175.74 APE12-dist-out 17.2211 APE11-dist-out 22.1488 APE10-dist-out 24.1945 APE9-dist-out 13.7662 S218A,S222A None None XRAY 2.59 0.214 0.257 B 310.0 297.0 0 26 26 0 [[68, 361]] 1.0 9aya STE_MAP2K1_HUMAN STE 6.5e-98 333.1 1.0 257.0 257.0 207 208 209 211 213 97 114 118 187 189 188 190.0 245 233 228 227 226 225 224 223 222 144 Dual specificity mitogen-activated protein kinase kinase 1
STE MAP2K1 MP2K1_HUMAN 9AYAD Q02750 39 382 393.0 A1AHE:60401,ANP:60402 Type1,ATPlike Inactive DFGin 6.236 14.1136 BLBplus -150.42, 169.48 62.14, 35.37 -84.74, 166.85 39.42, 88.37 -83.08, 73.44 out-out out 15.3824 Saltbr-out 15.2874 HRD-in -84.82, -56.5 86.5, -11.08 out-out-out SNCooo out-out ActLoopNT-out 9.653 ActLoopCT-out nonTYR APEdihe_aaooo APEdist_nnno APE10-dihe-na 999.0, 999.0 APE9-dihe-na 999.0, 132.69 APE8-dihe-out -103.38, -24.48 APE8-rot-out 47.89 APE67-dihe-out -161.23, 135.82 -100.94, -174.52 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-none 999.0 APE9-dist-out 12.7487 S218A,S222A None None XRAY 2.59 0.214 0.257 D 310.0 293.0 7 26 23 3 [[68, 361]] 1.0 9aya STE_MAP2K1_HUMAN STE 6.5e-98 333.1 1.0 257.0 257.0 207 208 209 211 213 97 114 118 187 189 188 190.0 245 233 228 227 226 225 224 223 222 144 Dual specificity mitogen-activated protein kinase kinase 1
TKL RAF1 RAF1_HUMAN 9AYAA P04049 342 614 648.0 No_ligand No_ligand Inactive DFGin 6.3662 14.2668 BLAminus -136.12, -165.85 49.32, 86.99 -103.48, 21.74 291.83, 76.13 -59.74, -18.47 in-none in 9.0808 Saltbr-none 999.0 HRD-in -71.73, -48.54 69.99, 0.7 none-in-out SNCnio in-out ActLoopNT-in 2.8942 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_iioi APE10-dihe-na -128.07, 13.13 APE9-dihe-na -91.19, -175.11 APE8-dihe-in -69.87, 137.88 APE8-rot-in 300.15 APE67-dihe-in -63.77, -25.92 -71.38, -32.74 APE12-dist-in 12.5452 APE11-dist-in 9.8883 APE10-dist-out 8.8439 APE9-dist-in 5.9778 Y340D,Y341D None None XRAY 2.59 0.214 0.257 A 280.0 267.0 6 30 30 0 [[349, 608]] 1.0 9aya TKL_RAF1_HUMAN TKL 2.6e-81 279.0 3.0 266.0 264.0 485 486 487 489 491 375 393 397 465 467 466 468.0 530 515 510 509 508 507 506 505 504 422 RAF proto-oncogene serine/threonine-protein kinase
TKL RAF1 RAF1_HUMAN 9AYAC P04049 341 613 648.0 No_ligand No_ligand Inactive DFGin 6.5551 14.821 BLAminus -133.94, -166.68 54.0, 73.37 -92.76, 23.95 288.97, 82.99 -61.86, -28.32 in-in in 8.7648 Saltbr-in 2.8037 HRD-in -69.13, -44.61 68.35, -7.89 in-in-out SNCiio in-out ActLoopNT-in 2.8119 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_iioo APE10-dihe-na 53.27, 27.21 APE9-dihe-na -96.24, -140.6 APE8-dihe-in -94.61, 133.74 APE8-rot-out 177.74 APE67-dihe-in -62.64, -31.47 -74.96, -14.97 APE12-dist-in 12.0325 APE11-dist-in 8.2808 APE10-dist-out 10.5493 APE9-dist-out 7.7979 Y340D,Y341D None None XRAY 2.59 0.214 0.257 C 280.0 263.0 10 30 30 0 [[349, 608]] 1.0 9aya TKL_RAF1_HUMAN TKL 2.6e-81 279.0 3.0 266.0 264.0 485 486 487 489 491 375 393 397 465 467 466 468.0 530 515 510 509 508 507 506 505 504 422 RAF proto-oncogene serine/threonine-protein kinase

PDB: 9AYA — 2 kinases

Total number of chains: 4
Active chains: 0
Total number of genes: 2
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 50.0% 9AYAA
DFGin BLBplus 2 50.0% 9AYAB
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
STE MAP2K1 MP2K1_HUMAN 9AYAB Q02750 42 382 393.0 A1AHE:60401,ANP:60402 Type1,ATPlike Inactive DFGin 6.2091 14.117 BLBplus -156.4, 169.03 57.59, 47.08 -100.39, 159.82 46.95, 83.0 -73.48, 80.99 out-out out 15.4442 Saltbr-out 14.9574 HRD-in -72.22, -50.64 78.5, -7.92 out-out-out SNCooo out-out ActLoopNT-out 9.725 ActLoopCT-out nonTYR APEdihe_aaooo APEdist_oooo APE10-dihe-na -67.32, 133.53 APE9-dihe-na -94.07, -169.54 APE8-dihe-out -110.54, -56.8 APE8-rot-out 71.18 APE67-dihe-out -155.6, 139.89 -98.61, 175.74 APE12-dist-out 17.2211 APE11-dist-out 22.1488 APE10-dist-out 24.1945 APE9-dist-out 13.7662 S218A,S222A None None XRAY 2.59 0.214 0.257 B 310.0 297.0 0 26 26 0 [[68, 361]] 1.0 9aya Homo sapiens STE_MAP2K1_HUMAN STE 6.5e-98 333.1 1.0 257.0 257.0 207 208 209 211 213 97 114 118 187 189 188 190.0 245 233 228 227 226 225 224 223 222 144 Dual specificity mitogen-activated protein kinase kinase 1
STE MAP2K1 MP2K1_HUMAN 9AYAD Q02750 39 382 393.0 A1AHE:60401,ANP:60402 Type1,ATPlike Inactive DFGin 6.236 14.1136 BLBplus -150.42, 169.48 62.14, 35.37 -84.74, 166.85 39.42, 88.37 -83.08, 73.44 out-out out 15.3824 Saltbr-out 15.2874 HRD-in -84.82, -56.5 86.5, -11.08 out-out-out SNCooo out-out ActLoopNT-out 9.653 ActLoopCT-out nonTYR APEdihe_aaooo APEdist_nnno APE10-dihe-na 999.0, 999.0 APE9-dihe-na 999.0, 132.69 APE8-dihe-out -103.38, -24.48 APE8-rot-out 47.89 APE67-dihe-out -161.23, 135.82 -100.94, -174.52 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-none 999.0 APE9-dist-out 12.7487 S218A,S222A None None XRAY 2.59 0.214 0.257 D 310.0 293.0 7 26 23 3 [[68, 361]] 1.0 9aya Homo sapiens STE_MAP2K1_HUMAN STE 6.5e-98 333.1 1.0 257.0 257.0 207 208 209 211 213 97 114 118 187 189 188 190.0 245 233 228 227 226 225 224 223 222 144 Dual specificity mitogen-activated protein kinase kinase 1
TKL RAF1 RAF1_HUMAN 9AYAA P04049 342 614 648.0 No_ligand No_ligand Inactive DFGin 6.3662 14.2668 BLAminus -136.12, -165.85 49.32, 86.99 -103.48, 21.74 291.83, 76.13 -59.74, -18.47 in-none in 9.0808 Saltbr-none 999.0 HRD-in -71.73, -48.54 69.99, 0.7 none-in-out SNCnio in-out ActLoopNT-in 2.8942 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_iioi APE10-dihe-na -128.07, 13.13 APE9-dihe-na -91.19, -175.11 APE8-dihe-in -69.87, 137.88 APE8-rot-in 300.15 APE67-dihe-in -63.77, -25.92 -71.38, -32.74 APE12-dist-in 12.5452 APE11-dist-in 9.8883 APE10-dist-out 8.8439 APE9-dist-in 5.9778 Y340D,Y341D None None XRAY 2.59 0.214 0.257 A 280.0 267.0 6 30 30 0 [[349, 608]] 1.0 9aya Homo sapiens TKL_RAF1_HUMAN TKL 2.6e-81 279.0 3.0 266.0 264.0 485 486 487 489 491 375 393 397 465 467 466 468.0 530 515 510 509 508 507 506 505 504 422 RAF proto-oncogene serine/threonine-protein kinase
TKL RAF1 RAF1_HUMAN 9AYAC P04049 341 613 648.0 No_ligand No_ligand Inactive DFGin 6.5551 14.821 BLAminus -133.94, -166.68 54.0, 73.37 -92.76, 23.95 288.97, 82.99 -61.86, -28.32 in-in in 8.7648 Saltbr-in 2.8037 HRD-in -69.13, -44.61 68.35, -7.89 in-in-out SNCiio in-out ActLoopNT-in 2.8119 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_iioo APE10-dihe-na 53.27, 27.21 APE9-dihe-na -96.24, -140.6 APE8-dihe-in -94.61, 133.74 APE8-rot-out 177.74 APE67-dihe-in -62.64, -31.47 -74.96, -14.97 APE12-dist-in 12.0325 APE11-dist-in 8.2808 APE10-dist-out 10.5493 APE9-dist-out 7.7979 Y340D,Y341D None None XRAY 2.59 0.214 0.257 C 280.0 263.0 10 30 30 0 [[349, 608]] 1.0 9aya Homo sapiens TKL_RAF1_HUMAN TKL 2.6e-81 279.0 3.0 266.0 264.0 485 486 487 489 491 375 393 397 465 467 466 468.0 530 515 510 509 508 507 506 505 504 422 RAF proto-oncogene serine/threonine-protein kinase

PDB: 9AYA — 2 kinases

Total number of chains: 0
Active chains: 0
Total number of genes: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name