PDB: 5YT3 — STE MP2K1_HUMAN

Total number of chains: 4
Active chains: 0
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin None 2 50.0% 5YT3B
DFGin BLBplus 1 25.0% 5YT3C
DFGinter None 1 25.0% 5YT3A
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
STE MAP2K1 MP2K1_HUMAN 5YT3C Q02750 40 382 393.0 ANP:401 ATPlike Inactive DFGin 5.7908 13.7388 BLBplus -158.87, 169.48 60.29, 28.47 -79.68, 102.42 54.67, 117.74 -64.84, 999.0 out-none out 15.4948 Saltbr-none 999.0 HRD-in -68.06, -45.57 70.46, -13.87 none-none-none SNCnnn none-none ActLoopNT-none 999.0 ActLoopCT-none nonTYR APEdihe_aannn APEdist_nnnn APE10-dihe-na 999.0, 999.0 APE9-dihe-na 999.0, 999.0 APE8-dihe-none 999.0, 999.0 APE8-rot-none 999.0 APE67-dihe-none 999.0, 133.64 999.0, 999.0 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-none 999.0 APE9-dist-none 999.0 S218D,S222D,T292A,S298A None None XRAY 2.9 0.213 0.289 C 350.0 288.0 55 26 9 17 [[68, 361]] 1.0 5yt3 STE_MAP2K1_HUMAN STE 4.7e-97 330.3 1.0 257.0 257.0 207 208 209 211 213 97 114 118 187 189 188 190.0 245 233 228 227 226 225 224 223 222 144 Dual specificity mitogen-activated protein kinase kinase 1
STE MAP2K1 MP2K1_HUMAN 5YT3B Q02750 40 382 393.0 ANP:401 ATPlike Inactive DFGin 5.8963 14.534 None -102.15, -169.78 -40.15, 149.52 -75.91, 143.56 303.08, 84.8 -64.88, 94.03 out-out out 16.3586 Saltbr-out 14.8656 HRD-out -104.42, 23.77 -144.46, 111.13 out-out-out SNCooo out-out ActLoopNT-out 8.0209 ActLoopCT-out nonTYR APEdihe_aaoio APEdist_oooo APE10-dihe-na -80.58, -32.09 APE9-dihe-na -86.11, -15.83 APE8-dihe-out 58.15, 64.44 APE8-rot-in 310.76 APE67-dihe-out -122.56, 143.11 -138.66, 139.98 APE12-dist-out 19.0552 APE11-dist-out 14.0554 APE10-dist-out 18.8403 APE9-dist-out 25.9099 S218D,S222D,T292A,S298A None None XRAY 2.9 0.213 0.289 B 350.0 311.0 32 26 26 0 [[68, 361]] 1.0 5yt3 STE_MAP2K1_HUMAN STE 4.7e-97 330.3 1.0 257.0 257.0 207 208 209 211 213 97 114 118 187 189 188 190.0 245 233 228 227 226 225 224 223 222 144 Dual specificity mitogen-activated protein kinase kinase 1
STE MAP2K1 MP2K1_HUMAN 5YT3D Q02750 39 382 393.0 ANP:401 ATPlike Inactive DFGin 5.7501 14.7176 None -77.53, 172.31 -71.81, 159.92 -66.82, 141.72 314.31, 87.77 -59.96, 135.61 out-out out 16.8715 Saltbr-out 15.0058 HRD-out -106.97, -11.01 -97.02, 107.72 out-out-out SNCooo out-out ActLoopNT-out 8.2442 ActLoopCT-out nonTYR APEdihe_aaooo APEdist_oooo APE10-dihe-na -63.82, -51.0 APE9-dihe-na -70.37, -13.35 APE8-dihe-out 47.35, 74.88 APE8-rot-out 143.99 APE67-dihe-out -134.73, 126.26 -143.64, 140.67 APE12-dist-out 19.3394 APE11-dist-out 14.3822 APE10-dist-out 19.1547 APE9-dist-out 26.1684 S218D,S222D,T292A,S298A None None XRAY 2.9 0.213 0.289 D 350.0 309.0 35 26 26 0 [[68, 361]] 1.0 5yt3 STE_MAP2K1_HUMAN STE 4.7e-97 330.3 1.0 257.0 257.0 207 208 209 211 213 97 114 118 187 189 188 190.0 245 233 228 227 226 225 224 223 222 144 Dual specificity mitogen-activated protein kinase kinase 1
STE MAP2K1 MP2K1_HUMAN 5YT3A Q02750 39 382 393.0 ANP:401 ATPlike Inactive DFGinter 6.3567 10.3827 None -128.68, 173.26 63.68, 38.66 -52.93, -21.76 28.6, 36.22 -61.84, 114.84 out-out out 16.3153 Saltbr-out 14.589 HRD-in -77.7, -42.23 58.41, 13.61 out-none-out SNCono none-out ActLoopNT-none 999.0 ActLoopCT-out nonTYR APEdihe_aanno APEdist_nnnn APE10-dihe-na 999.0, 999.0 APE9-dihe-na 999.0, 999.0 APE8-dihe-none 999.0, 70.97 APE8-rot-none 999.0 APE67-dihe-out -132.4, 139.8 -149.07, 91.78 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-none 999.0 APE9-dist-none 999.0 S218D,S222D,T292A,S298A None None XRAY 2.9 0.213 0.289 A 350.0 297.0 47 26 12 14 [[68, 361]] 1.0 5yt3 STE_MAP2K1_HUMAN STE 4.7e-97 330.3 1.0 257.0 257.0 207 208 209 211 213 97 114 118 187 189 188 190.0 245 233 228 227 226 225 224 223 222 144 Dual specificity mitogen-activated protein kinase kinase 1

PDB: 5YT3 — STE MP2K1_HUMAN

Total number of chains: 4
Active chains: 0
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin None 2 50.0% 5YT3B
DFGin BLBplus 1 25.0% 5YT3C
DFGinter None 1 25.0% 5YT3A
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
STE MAP2K1 MP2K1_HUMAN 5YT3C Q02750 40 382 393.0 ANP:401 ATPlike Inactive DFGin 5.7908 13.7388 BLBplus -158.87, 169.48 60.29, 28.47 -79.68, 102.42 54.67, 117.74 -64.84, 999.0 out-none out 15.4948 Saltbr-none 999.0 HRD-in -68.06, -45.57 70.46, -13.87 none-none-none SNCnnn none-none ActLoopNT-none 999.0 ActLoopCT-none nonTYR APEdihe_aannn APEdist_nnnn APE10-dihe-na 999.0, 999.0 APE9-dihe-na 999.0, 999.0 APE8-dihe-none 999.0, 999.0 APE8-rot-none 999.0 APE67-dihe-none 999.0, 133.64 999.0, 999.0 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-none 999.0 APE9-dist-none 999.0 S218D,S222D,T292A,S298A None None XRAY 2.9 0.213 0.289 C 350.0 288.0 55 26 9 17 [[68, 361]] 1.0 5yt3 Homo sapiens STE_MAP2K1_HUMAN STE 4.7e-97 330.3 1.0 257.0 257.0 207 208 209 211 213 97 114 118 187 189 188 190.0 245 233 228 227 226 225 224 223 222 144 Dual specificity mitogen-activated protein kinase kinase 1
STE MAP2K1 MP2K1_HUMAN 5YT3B Q02750 40 382 393.0 ANP:401 ATPlike Inactive DFGin 5.8963 14.534 None -102.15, -169.78 -40.15, 149.52 -75.91, 143.56 303.08, 84.8 -64.88, 94.03 out-out out 16.3586 Saltbr-out 14.8656 HRD-out -104.42, 23.77 -144.46, 111.13 out-out-out SNCooo out-out ActLoopNT-out 8.0209 ActLoopCT-out nonTYR APEdihe_aaoio APEdist_oooo APE10-dihe-na -80.58, -32.09 APE9-dihe-na -86.11, -15.83 APE8-dihe-out 58.15, 64.44 APE8-rot-in 310.76 APE67-dihe-out -122.56, 143.11 -138.66, 139.98 APE12-dist-out 19.0552 APE11-dist-out 14.0554 APE10-dist-out 18.8403 APE9-dist-out 25.9099 S218D,S222D,T292A,S298A None None XRAY 2.9 0.213 0.289 B 350.0 311.0 32 26 26 0 [[68, 361]] 1.0 5yt3 Homo sapiens STE_MAP2K1_HUMAN STE 4.7e-97 330.3 1.0 257.0 257.0 207 208 209 211 213 97 114 118 187 189 188 190.0 245 233 228 227 226 225 224 223 222 144 Dual specificity mitogen-activated protein kinase kinase 1
STE MAP2K1 MP2K1_HUMAN 5YT3D Q02750 39 382 393.0 ANP:401 ATPlike Inactive DFGin 5.7501 14.7176 None -77.53, 172.31 -71.81, 159.92 -66.82, 141.72 314.31, 87.77 -59.96, 135.61 out-out out 16.8715 Saltbr-out 15.0058 HRD-out -106.97, -11.01 -97.02, 107.72 out-out-out SNCooo out-out ActLoopNT-out 8.2442 ActLoopCT-out nonTYR APEdihe_aaooo APEdist_oooo APE10-dihe-na -63.82, -51.0 APE9-dihe-na -70.37, -13.35 APE8-dihe-out 47.35, 74.88 APE8-rot-out 143.99 APE67-dihe-out -134.73, 126.26 -143.64, 140.67 APE12-dist-out 19.3394 APE11-dist-out 14.3822 APE10-dist-out 19.1547 APE9-dist-out 26.1684 S218D,S222D,T292A,S298A None None XRAY 2.9 0.213 0.289 D 350.0 309.0 35 26 26 0 [[68, 361]] 1.0 5yt3 Homo sapiens STE_MAP2K1_HUMAN STE 4.7e-97 330.3 1.0 257.0 257.0 207 208 209 211 213 97 114 118 187 189 188 190.0 245 233 228 227 226 225 224 223 222 144 Dual specificity mitogen-activated protein kinase kinase 1
STE MAP2K1 MP2K1_HUMAN 5YT3A Q02750 39 382 393.0 ANP:401 ATPlike Inactive DFGinter 6.3567 10.3827 None -128.68, 173.26 63.68, 38.66 -52.93, -21.76 28.6, 36.22 -61.84, 114.84 out-out out 16.3153 Saltbr-out 14.589 HRD-in -77.7, -42.23 58.41, 13.61 out-none-out SNCono none-out ActLoopNT-none 999.0 ActLoopCT-out nonTYR APEdihe_aanno APEdist_nnnn APE10-dihe-na 999.0, 999.0 APE9-dihe-na 999.0, 999.0 APE8-dihe-none 999.0, 70.97 APE8-rot-none 999.0 APE67-dihe-out -132.4, 139.8 -149.07, 91.78 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-none 999.0 APE9-dist-none 999.0 S218D,S222D,T292A,S298A None None XRAY 2.9 0.213 0.289 A 350.0 297.0 47 26 12 14 [[68, 361]] 1.0 5yt3 Homo sapiens STE_MAP2K1_HUMAN STE 4.7e-97 330.3 1.0 257.0 257.0 207 208 209 211 213 97 114 118 187 189 188 190.0 245 233 228 227 226 225 224 223 222 144 Dual specificity mitogen-activated protein kinase kinase 1

PDB: 5YT3 — STE MP2K1_HUMAN

Total number of chains: 0
Active chains: 0
Total number of genes: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name