PDB: 9MMP — 2 kinases

Total number of chains: 2
Active chains: 0
Total number of genes: 2
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLBplus 2 100.0% 9MMPA
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
STE MAP2K1 MP2K1_HUMAN 9MMPB Q02750 62 380 393.0 AGS:60701,LCJ:60702 ATPlike,Type3 Inactive DFGin 6.4937 13.7015 BLBplus -142.17, 163.3 59.56, 65.37 -113.14, 157.69 39.56, 95.33 -79.99, 73.26 out-out out 15.7564 Saltbr-out 16.3325 HRD-in -69.63, -60.91 71.6, -9.27 out-out-out SNCooo out-out ActLoopNT-out 8.0011 ActLoopCT-out nonTYR APEdihe_aaoio APEdist_oooo APE10-dihe-na -73.57, 130.1 APE9-dihe-na -94.62, 178.33 APE8-dihe-out -96.1, -46.02 APE8-rot-in 278.39 APE67-dihe-out -136.63, 147.99 -117.77, 157.18 APE12-dist-out 17.2275 APE11-dist-out 22.2405 APE10-dist-out 24.3959 APE9-dist-out 13.7692 S218A,S222A None None EM 3.4 999.0 999.0 B 415.0 279.0 40 26 26 0 [[68, 361]] 1.0 9mmp STE_MAP2K1_HUMAN STE 1.3e-96 329.0 1.0 257.0 257.0 207 208 209 211 213 97 114 118 187 189 188 190.0 245 233 228 227 226 225 224 223 222 144 Dual specificity mitogen-activated protein kinase kinase 1
TKL RAF1 RAF1_HUMAN 9MMPA P04049 138 630 648.0 AGS:60701 ATPlike Inactive DFGin 6.1073 13.2684 BLBplus -130.39, 177.17 56.68, 47.87 -99.84, 149.88 40.92, 87.91 73.17, -140.77 out-out out 14.3612 Saltbr-out 12.3822 HRD-out -74.8, 81.36 -67.74, 154.91 out-out-out SNCooo out-out ActLoopNT-out 9.1666 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_oooo APE10-dihe-na -156.54, 146.13 APE9-dihe-na 117.78, -173.39 APE8-dihe-in -67.5, 146.42 APE8-rot-in 282.71 APE67-dihe-in -62.97, -41.04 -80.62, -35.94 APE12-dist-out 14.2949 APE11-dist-out 14.3656 APE10-dist-out 10.6756 APE9-dist-out 7.9092 Q156R,D587E SEP259,SEP621 SEP259,SEP621 EM 3.4 999.0 999.0 A 683.0 348.0 0 30 30 0 [[349, 608]] 1.0 9mmp TKL_RAF1_HUMAN TKL 2e-80 276.3 3.0 266.0 264.0 485 486 487 489 491 375 393 397 465 467 466 468.0 530 515 510 509 508 507 506 505 504 422 RAF proto-oncogene serine/threonine-protein kinase

PDB: 9MMP — 2 kinases

Total number of chains: 2
Active chains: 0
Total number of genes: 2
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLBplus 2 100.0% 9MMPA
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
STE MAP2K1 MP2K1_HUMAN 9MMPB Q02750 62 380 393.0 AGS:60701,LCJ:60702 ATPlike,Type3 Inactive DFGin 6.4937 13.7015 BLBplus -142.17, 163.3 59.56, 65.37 -113.14, 157.69 39.56, 95.33 -79.99, 73.26 out-out out 15.7564 Saltbr-out 16.3325 HRD-in -69.63, -60.91 71.6, -9.27 out-out-out SNCooo out-out ActLoopNT-out 8.0011 ActLoopCT-out nonTYR APEdihe_aaoio APEdist_oooo APE10-dihe-na -73.57, 130.1 APE9-dihe-na -94.62, 178.33 APE8-dihe-out -96.1, -46.02 APE8-rot-in 278.39 APE67-dihe-out -136.63, 147.99 -117.77, 157.18 APE12-dist-out 17.2275 APE11-dist-out 22.2405 APE10-dist-out 24.3959 APE9-dist-out 13.7692 S218A,S222A None None EM 3.4 999.0 999.0 B 415.0 279.0 40 26 26 0 [[68, 361]] 1.0 9mmp Homo sapiens STE_MAP2K1_HUMAN STE 1.3e-96 329.0 1.0 257.0 257.0 207 208 209 211 213 97 114 118 187 189 188 190.0 245 233 228 227 226 225 224 223 222 144 Dual specificity mitogen-activated protein kinase kinase 1
TKL RAF1 RAF1_HUMAN 9MMPA P04049 138 630 648.0 AGS:60701 ATPlike Inactive DFGin 6.1073 13.2684 BLBplus -130.39, 177.17 56.68, 47.87 -99.84, 149.88 40.92, 87.91 73.17, -140.77 out-out out 14.3612 Saltbr-out 12.3822 HRD-out -74.8, 81.36 -67.74, 154.91 out-out-out SNCooo out-out ActLoopNT-out 9.1666 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_oooo APE10-dihe-na -156.54, 146.13 APE9-dihe-na 117.78, -173.39 APE8-dihe-in -67.5, 146.42 APE8-rot-in 282.71 APE67-dihe-in -62.97, -41.04 -80.62, -35.94 APE12-dist-out 14.2949 APE11-dist-out 14.3656 APE10-dist-out 10.6756 APE9-dist-out 7.9092 Q156R,D587E SEP259,SEP621 SEP259,SEP621 EM 3.4 999.0 999.0 A 683.0 348.0 0 30 30 0 [[349, 608]] 1.0 9mmp Homo sapiens TKL_RAF1_HUMAN TKL 2e-80 276.3 3.0 266.0 264.0 485 486 487 489 491 375 393 397 465 467 466 468.0 530 515 510 509 508 507 506 505 504 422 RAF proto-oncogene serine/threonine-protein kinase

PDB: 9MMP — 2 kinases

Total number of chains: 0
Active chains: 0
Total number of genes: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name