PDB: 5VAM — TKL BRAF_HUMAN

Total number of chains: 2
Active chains: 0
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGout BBAminus 2 100.0% 5VAMA
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
TKL BRAF BRAF_HUMAN 5VAMA P15056 449 721 766.0 92J:801 Type2 Inactive DFGout 12.3573 11.6106 BBAminus -140.58, -169.46 -141.4, 105.48 -100.78, 5.91 303.65, 125.69 -66.9, 143.7 in-in in 8.6586 Saltbr-in 2.7814 HRD-in -61.66, -53.22 75.75, -7.37 in-out-out SNCioo out-out ActLoopNT-out 16.3847 ActLoopCT-out nonTYR APEdihe_aaoii APEdist_oioo APE10-dihe-na -116.11, 170.97 APE9-dihe-na 75.01, 10.89 APE8-dihe-out -136.21, 30.89 APE8-rot-in 310.43 APE67-dihe-in -62.28, -24.09 -56.43, -35.95 APE12-dist-out 17.0139 APE11-dist-in 12.0598 APE10-dist-out 12.944 APE9-dist-out 9.7673 None None None XRAY 2.1 0.194 0.223 A 281.0 269.0 4 30 26 4 [[457, 716]] 1.0 5vam TKL_BRAF_HUMAN TKL 7.9e-82 280.7 4.0 266.0 263.0 593 594 595 597 599 483 501 505 573 575 574 576.0 638 623 618 617 616 615 614 613 612 530 Serine/threonine-protein kinase B-raf
TKL BRAF BRAF_HUMAN 5VAMB P15056 449 721 766.0 92J:801 Type2 Inactive DFGout 12.148 11.53 BBAminus -153.03, -162.76 -138.62, 102.37 -98.12, 14.9 310.11, 121.47 -69.82, 134.27 in-in in 9.1253 Saltbr-in 2.782 HRD-in -61.72, -53.8 75.79, -5.73 in-none-out SNCino none-out ActLoopNT-none 999.0 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_nnno APE10-dihe-na 999.0, 999.0 APE9-dihe-na 999.0, 117.24 APE8-dihe-in -95.34, 81.39 APE8-rot-in 346.58 APE67-dihe-in -66.96, -30.47 -72.22, -17.98 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-none 999.0 APE9-dist-out 8.1777 None None None XRAY 2.1 0.194 0.223 B 281.0 260.0 13 30 17 13 [[457, 716]] 1.0 5vam TKL_BRAF_HUMAN TKL 7.9e-82 280.7 4.0 266.0 263.0 593 594 595 597 599 483 501 505 573 575 574 576.0 638 623 618 617 616 615 614 613 612 530 Serine/threonine-protein kinase B-raf

PDB: 5VAM — TKL BRAF_HUMAN

Total number of chains: 2
Active chains: 0
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGout BBAminus 2 100.0% 5VAMA
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
TKL BRAF BRAF_HUMAN 5VAMA P15056 449 721 766.0 92J:801 Type2 Inactive DFGout 12.3573 11.6106 BBAminus -140.58, -169.46 -141.4, 105.48 -100.78, 5.91 303.65, 125.69 -66.9, 143.7 in-in in 8.6586 Saltbr-in 2.7814 HRD-in -61.66, -53.22 75.75, -7.37 in-out-out SNCioo out-out ActLoopNT-out 16.3847 ActLoopCT-out nonTYR APEdihe_aaoii APEdist_oioo APE10-dihe-na -116.11, 170.97 APE9-dihe-na 75.01, 10.89 APE8-dihe-out -136.21, 30.89 APE8-rot-in 310.43 APE67-dihe-in -62.28, -24.09 -56.43, -35.95 APE12-dist-out 17.0139 APE11-dist-in 12.0598 APE10-dist-out 12.944 APE9-dist-out 9.7673 None None None XRAY 2.1 0.194 0.223 A 281.0 269.0 4 30 26 4 [[457, 716]] 1.0 5vam Homo sapiens TKL_BRAF_HUMAN TKL 7.9e-82 280.7 4.0 266.0 263.0 593 594 595 597 599 483 501 505 573 575 574 576.0 638 623 618 617 616 615 614 613 612 530 Serine/threonine-protein kinase B-raf
TKL BRAF BRAF_HUMAN 5VAMB P15056 449 721 766.0 92J:801 Type2 Inactive DFGout 12.148 11.53 BBAminus -153.03, -162.76 -138.62, 102.37 -98.12, 14.9 310.11, 121.47 -69.82, 134.27 in-in in 9.1253 Saltbr-in 2.782 HRD-in -61.72, -53.8 75.79, -5.73 in-none-out SNCino none-out ActLoopNT-none 999.0 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_nnno APE10-dihe-na 999.0, 999.0 APE9-dihe-na 999.0, 117.24 APE8-dihe-in -95.34, 81.39 APE8-rot-in 346.58 APE67-dihe-in -66.96, -30.47 -72.22, -17.98 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-none 999.0 APE9-dist-out 8.1777 None None None XRAY 2.1 0.194 0.223 B 281.0 260.0 13 30 17 13 [[457, 716]] 1.0 5vam Homo sapiens TKL_BRAF_HUMAN TKL 7.9e-82 280.7 4.0 266.0 263.0 593 594 595 597 599 483 501 505 573 575 574 576.0 638 623 618 617 616 615 614 613 612 530 Serine/threonine-protein kinase B-raf

PDB: 5VAM — TKL BRAF_HUMAN

Total number of chains: 0
Active chains: 0
Total number of genes: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name