PDB: 5DG5 — TYR MET_HUMAN

Total number of chains: 2
Active chains: 0
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGout None 2 100.0% 5DG5A
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
TYR MET MET_HUMAN 5DG5A P08581 1050 1346 1390.0 5B4:1401 Type2 Inactive DFGout 15.2451 8.9808 None -148.03, 172.77 -125.96, 63.08 -65.16, -43.8 189.97, 16.62 73.98, -1.88 in-out in 9.2638 Saltbr-out 3.8 HRD-in -77.46, -50.65 83.37, -30.01 out-out-in SNCooi out-in ActLoopNT-out 21.3518 ActLoopCT-in TYR APEdihe_iiiai APEdist_aaai APE10-dihe-in -77.57, 108.34 APE9-dihe-in -125.39, 83.42 APE8-dihe-in -80.42, 85.64 APE8-rot-na 33.34 APE67-dihe-in -79.25, -5.1 -56.96, -39.29 APE12-dist-na 16.235 APE11-dist-na 16.5268 APE10-dist-na 11.1882 APE9-dist-in 6.9464 None None None XRAY 2.6 0.206 0.245 A 318.0 297.0 0 32 32 0 [[1078, 1339]] 1.0 5dg5 TYR_MET_HUMAN TYR 7.7e-92 313.7 2.0 260.0 259.0 1221 1222 1223 1225 1227 1110 1127 1131 1201 1203 1202 1204.0 1265 1253 1248 1247 1246 1245 1244 1243 1242 1158 Hepatocyte growth factor receptor
TYR MET MET_HUMAN 5DG5B P08581 1050 1346 1390.0 5B4:1401 Type2 Inactive DFGout 15.2601 8.9713 None -148.45, 172.71 -124.98, 61.77 -64.55, -43.29 189.3, 16.8 74.05, -2.15 in-out in 9.3084 Saltbr-out 3.8284 HRD-in -77.28, -50.39 83.54, -30.49 out-out-in SNCooi out-in ActLoopNT-out 21.3156 ActLoopCT-in TYR APEdihe_iiiai APEdist_aaai APE10-dihe-in -78.76, 106.09 APE9-dihe-in -126.22, 85.06 APE8-dihe-in -81.11, 86.98 APE8-rot-na 32.68 APE67-dihe-in -78.84, -4.43 -58.19, -40.13 APE12-dist-na 16.1464 APE11-dist-na 16.2673 APE10-dist-na 10.9396 APE9-dist-in 6.9396 None None None XRAY 2.6 0.206 0.245 B 318.0 297.0 0 32 32 0 [[1078, 1339]] 1.0 5dg5 TYR_MET_HUMAN TYR 7.7e-92 313.7 2.0 260.0 259.0 1221 1222 1223 1225 1227 1110 1127 1131 1201 1203 1202 1204.0 1265 1253 1248 1247 1246 1245 1244 1243 1242 1158 Hepatocyte growth factor receptor

PDB: 5DG5 — TYR MET_HUMAN

Total number of chains: 2
Active chains: 0
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGout None 2 100.0% 5DG5A
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
TYR MET MET_HUMAN 5DG5A P08581 1050 1346 1390.0 5B4:1401 Type2 Inactive DFGout 15.2451 8.9808 None -148.03, 172.77 -125.96, 63.08 -65.16, -43.8 189.97, 16.62 73.98, -1.88 in-out in 9.2638 Saltbr-out 3.8 HRD-in -77.46, -50.65 83.37, -30.01 out-out-in SNCooi out-in ActLoopNT-out 21.3518 ActLoopCT-in TYR APEdihe_iiiai APEdist_aaai APE10-dihe-in -77.57, 108.34 APE9-dihe-in -125.39, 83.42 APE8-dihe-in -80.42, 85.64 APE8-rot-na 33.34 APE67-dihe-in -79.25, -5.1 -56.96, -39.29 APE12-dist-na 16.235 APE11-dist-na 16.5268 APE10-dist-na 11.1882 APE9-dist-in 6.9464 None None None XRAY 2.6 0.206 0.245 A 318.0 297.0 0 32 32 0 [[1078, 1339]] 1.0 5dg5 Homo sapiens TYR_MET_HUMAN TYR 7.7e-92 313.7 2.0 260.0 259.0 1221 1222 1223 1225 1227 1110 1127 1131 1201 1203 1202 1204.0 1265 1253 1248 1247 1246 1245 1244 1243 1242 1158 Hepatocyte growth factor receptor
TYR MET MET_HUMAN 5DG5B P08581 1050 1346 1390.0 5B4:1401 Type2 Inactive DFGout 15.2601 8.9713 None -148.45, 172.71 -124.98, 61.77 -64.55, -43.29 189.3, 16.8 74.05, -2.15 in-out in 9.3084 Saltbr-out 3.8284 HRD-in -77.28, -50.39 83.54, -30.49 out-out-in SNCooi out-in ActLoopNT-out 21.3156 ActLoopCT-in TYR APEdihe_iiiai APEdist_aaai APE10-dihe-in -78.76, 106.09 APE9-dihe-in -126.22, 85.06 APE8-dihe-in -81.11, 86.98 APE8-rot-na 32.68 APE67-dihe-in -78.84, -4.43 -58.19, -40.13 APE12-dist-na 16.1464 APE11-dist-na 16.2673 APE10-dist-na 10.9396 APE9-dist-in 6.9396 None None None XRAY 2.6 0.206 0.245 B 318.0 297.0 0 32 32 0 [[1078, 1339]] 1.0 5dg5 Homo sapiens TYR_MET_HUMAN TYR 7.7e-92 313.7 2.0 260.0 259.0 1221 1222 1223 1225 1227 1110 1127 1131 1201 1203 1202 1204.0 1265 1253 1248 1247 1246 1245 1244 1243 1242 1158 Hepatocyte growth factor receptor

PDB: 5DG5 — TYR MET_HUMAN

Total number of chains: 0
Active chains: 0
Total number of genes: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name