PDB: 4APC — NEK NEK1_HUMAN

Total number of chains: 2
Active chains: 0
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGinter BABtrans 2 100.0% 4APCB
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
NEK NEK1 NEK1_HUMAN 4APCA Q96PY6 1 284 1258.0 No_ligand No_ligand Inactive DFGinter 9.6436 5.9989 BABtrans -56.67, 136.95 -74.99, -38.65 -62.93, 130.11 204.86, 72.11 112.63, -15.33 out-none out 11.4846 Saltbr-none 999.0 HRD-out -132.48, 108.44 -75.85, -8.05 none-out-out SNCnoo out-out ActLoopNT-out 5.3591 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_oooo APE10-dihe-na -88.83, -42.36 APE9-dihe-na -95.57, -114.29 APE8-dihe-in -105.03, 125.23 APE8-rot-in 310.11 APE67-dihe-in -73.53, -9.9 -94.81, -5.15 APE12-dist-out 15.9707 APE11-dist-out 20.7331 APE10-dist-out 18.8674 APE9-dist-out 10.4316 T162A None None XRAY 2.1 0.216 0.248 A 350.0 278.0 6 28 28 0 [[4, 258]] 1.0 4apc NEK_NEK1_HUMAN NEK 2e-117 397.3 1.0 256.0 256.0 145 146 147 149 151 33 51 55 125 127 126 128.0 185 173 168 167 166 165 164 163 162 81 Serine/threonine-protein kinase Nek1
NEK NEK1 NEK1_HUMAN 4APCB Q96PY6 1 284 1258.0 No_ligand No_ligand Inactive DFGinter 9.5524 6.1025 BABtrans -57.58, 134.02 -75.98, -33.46 -60.99, 130.52 202.95, 70.38 110.42, -15.38 out-out out 11.7317 Saltbr-out 12.8771 HRD-out -131.41, 107.06 -74.49, -7.52 out-out-out SNCooo out-out ActLoopNT-out 5.3523 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_oooo APE10-dihe-na -75.97, -42.82 APE9-dihe-na -96.64, -115.4 APE8-dihe-in -106.78, 122.56 APE8-rot-in 310.29 APE67-dihe-in -74.36, -7.84 -93.49, -5.36 APE12-dist-out 15.8766 APE11-dist-out 20.6288 APE10-dist-out 18.8135 APE9-dist-out 10.4107 T162A None None XRAY 2.1 0.216 0.248 B 350.0 279.0 5 28 28 0 [[4, 258]] 1.0 4apc NEK_NEK1_HUMAN NEK 2e-117 397.3 1.0 256.0 256.0 145 146 147 149 151 33 51 55 125 127 126 128.0 185 173 168 167 166 165 164 163 162 81 Serine/threonine-protein kinase Nek1

PDB: 4APC — NEK NEK1_HUMAN

Total number of chains: 2
Active chains: 0
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGinter BABtrans 2 100.0% 4APCB
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
NEK NEK1 NEK1_HUMAN 4APCA Q96PY6 1 284 1258.0 No_ligand No_ligand Inactive DFGinter 9.6436 5.9989 BABtrans -56.67, 136.95 -74.99, -38.65 -62.93, 130.11 204.86, 72.11 112.63, -15.33 out-none out 11.4846 Saltbr-none 999.0 HRD-out -132.48, 108.44 -75.85, -8.05 none-out-out SNCnoo out-out ActLoopNT-out 5.3591 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_oooo APE10-dihe-na -88.83, -42.36 APE9-dihe-na -95.57, -114.29 APE8-dihe-in -105.03, 125.23 APE8-rot-in 310.11 APE67-dihe-in -73.53, -9.9 -94.81, -5.15 APE12-dist-out 15.9707 APE11-dist-out 20.7331 APE10-dist-out 18.8674 APE9-dist-out 10.4316 T162A None None XRAY 2.1 0.216 0.248 A 350.0 278.0 6 28 28 0 [[4, 258]] 1.0 4apc Homo sapiens NEK_NEK1_HUMAN NEK 2e-117 397.3 1.0 256.0 256.0 145 146 147 149 151 33 51 55 125 127 126 128.0 185 173 168 167 166 165 164 163 162 81 Serine/threonine-protein kinase Nek1
NEK NEK1 NEK1_HUMAN 4APCB Q96PY6 1 284 1258.0 No_ligand No_ligand Inactive DFGinter 9.5524 6.1025 BABtrans -57.58, 134.02 -75.98, -33.46 -60.99, 130.52 202.95, 70.38 110.42, -15.38 out-out out 11.7317 Saltbr-out 12.8771 HRD-out -131.41, 107.06 -74.49, -7.52 out-out-out SNCooo out-out ActLoopNT-out 5.3523 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_oooo APE10-dihe-na -75.97, -42.82 APE9-dihe-na -96.64, -115.4 APE8-dihe-in -106.78, 122.56 APE8-rot-in 310.29 APE67-dihe-in -74.36, -7.84 -93.49, -5.36 APE12-dist-out 15.8766 APE11-dist-out 20.6288 APE10-dist-out 18.8135 APE9-dist-out 10.4107 T162A None None XRAY 2.1 0.216 0.248 B 350.0 279.0 5 28 28 0 [[4, 258]] 1.0 4apc Homo sapiens NEK_NEK1_HUMAN NEK 2e-117 397.3 1.0 256.0 256.0 145 146 147 149 151 33 51 55 125 127 126 128.0 185 173 168 167 166 165 164 163 162 81 Serine/threonine-protein kinase Nek1

PDB: 4APC — NEK NEK1_HUMAN

Total number of chains: 0
Active chains: 0
Total number of genes: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name