Ligand: YAM

Total number of chains: 3
Active chains: 0
Total number of genes: 2
Spatial label Dihedral label Number of Chains Percent Representative
DFGin None 3 100.0% 8XOXA
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
TYR PTK2 FAK1_HUMAN 3BZ3A Q05397 414 689 1052.0 YAM:1 Type1 Inactive DFGin 6.6719 15.8496 None -79.02, -179.99 -56.66, 136.15 -73.84, -38.07 287.89, 7.91 -61.02, -47.25 in-in in 7.5275 Saltbr-in 2.589 HRD-in -85.54, -56.7 90.17, -10.54 in-out-out SNCioo out-out ActLoopNT-out 10.5565 ActLoopCT-out TYR APEdihe_nniai APEdist_aaao APE10-dihe-none 999.0, 999.0 APE9-dihe-none 999.0, 126.15 APE8-dihe-in -80.58, 72.72 APE8-rot-na 30.9 APE67-dihe-in -70.02, -11.94 -54.79, -41.57 APE12-dist-na 999.0 APE11-dist-na 999.0 APE10-dist-na 999.0 APE9-dist-out 8.1297 None None None XRAY 2.2 0.16 0.234 A 276.0 259.0 17 29 16 13 [[422, 678]] 1.0 3bz3 TYR_PTK2_HUMAN TYR 3.3e-93 317.7 1.0 260.0 260.0 563 564 565 567 569 454 471 475 543 545 544 546.0 604 592 587 586 585 584 583 582 581 500 Focal adhesion kinase 1
TYR PTK2B FAK2_HUMAN 8XOXA Q14289 417 692 1009.0 YAM:701 Type1 Inactive DFGin 6.9505 16.4086 None -80.09, -162.96 -67.92, 153.8 -59.81, 149.69 281.78, 71.56 -67.49, 135.35 in-out in 9.5056 Saltbr-out 8.7294 HRD-in -84.67, -50.29 73.68, 0.48 out-none-out SNCono none-out ActLoopNT-none 999.0 ActLoopCT-out TYR APEdihe_nniai APEdist_aaao APE10-dihe-none 999.0, 999.0 APE9-dihe-none 999.0, 129.93 APE8-dihe-in -79.37, 59.37 APE8-rot-na 36.03 APE67-dihe-in -77.94, -4.55 -50.42, -39.11 APE12-dist-na 999.0 APE11-dist-na 999.0 APE10-dist-na 999.0 APE9-dist-out 9.3588 None None None XRAY 1.9 0.172 0.23 A 277.0 261.0 15 29 14 15 [[425, 681]] 1.0 8xox TYR_PTK2B_HUMAN TYR 2.4e-92 314.8 2.0 260.0 259.0 566 567 568 570 572 457 474 478 546 548 547 549.0 607 595 590 589 588 587 586 585 584 503 Protein-tyrosine kinase 2-beta
TYR PTK2B FAK2_HUMAN 5TOBA Q14289 420 690 1009.0 YAM:701 Type1 Inactive DFGin 6.6239 15.8925 None -80.12, -169.51 -62.87, 163.32 -68.81, 156.27 288.67, 73.8 -89.77, 999.0 in-none in 9.4038 Saltbr-none 999.0 HRD-in -91.14, -46.46 78.7, -8.23 none-none-none SNCnnn none-none ActLoopNT-none 999.0 ActLoopCT-none TYR APEdihe_nnnai APEdist_aaan APE10-dihe-none 999.0, 999.0 APE9-dihe-none 999.0, 999.0 APE8-dihe-none 999.0, 58.94 APE8-rot-na 29.17 APE67-dihe-in -80.81, -3.79 -54.7, -37.6 APE12-dist-na 999.0 APE11-dist-na 999.0 APE10-dist-na 999.0 APE9-dist-none 999.0 None None None XRAY 2.117 0.212 0.262 A 282.0 245.0 26 29 11 18 [[425, 681]] 1.0 5tob TYR_PTK2B_HUMAN TYR 2.5e-92 314.8 2.0 260.0 259.0 566 567 568 570 572 457 474 478 546 548 547 549.0 607 595 590 589 588 587 586 585 584 503 Protein-tyrosine kinase 2-beta

Ligand: YAM

Total number of chains: 3
Active chains: 0
Total number of genes: 2
Spatial label Dihedral label Number of Chains Percent Representative
DFGin None 3 100.0% 8XOXA
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
TYR PTK2 FAK1_HUMAN 3BZ3A Q05397 414 689 1052.0 YAM:1 Type1 Inactive DFGin 6.6719 15.8496 None -79.02, -179.99 -56.66, 136.15 -73.84, -38.07 287.89, 7.91 -61.02, -47.25 in-in in 7.5275 Saltbr-in 2.589 HRD-in -85.54, -56.7 90.17, -10.54 in-out-out SNCioo out-out ActLoopNT-out 10.5565 ActLoopCT-out TYR APEdihe_nniai APEdist_aaao APE10-dihe-none 999.0, 999.0 APE9-dihe-none 999.0, 126.15 APE8-dihe-in -80.58, 72.72 APE8-rot-na 30.9 APE67-dihe-in -70.02, -11.94 -54.79, -41.57 APE12-dist-na 999.0 APE11-dist-na 999.0 APE10-dist-na 999.0 APE9-dist-out 8.1297 None None None XRAY 2.2 0.16 0.234 A 276.0 259.0 17 29 16 13 [[422, 678]] 1.0 3bz3 Homo sapiens TYR_PTK2_HUMAN TYR 3.3e-93 317.7 1.0 260.0 260.0 563 564 565 567 569 454 471 475 543 545 544 546.0 604 592 587 586 585 584 583 582 581 500 Focal adhesion kinase 1
TYR PTK2B FAK2_HUMAN 8XOXA Q14289 417 692 1009.0 YAM:701 Type1 Inactive DFGin 6.9505 16.4086 None -80.09, -162.96 -67.92, 153.8 -59.81, 149.69 281.78, 71.56 -67.49, 135.35 in-out in 9.5056 Saltbr-out 8.7294 HRD-in -84.67, -50.29 73.68, 0.48 out-none-out SNCono none-out ActLoopNT-none 999.0 ActLoopCT-out TYR APEdihe_nniai APEdist_aaao APE10-dihe-none 999.0, 999.0 APE9-dihe-none 999.0, 129.93 APE8-dihe-in -79.37, 59.37 APE8-rot-na 36.03 APE67-dihe-in -77.94, -4.55 -50.42, -39.11 APE12-dist-na 999.0 APE11-dist-na 999.0 APE10-dist-na 999.0 APE9-dist-out 9.3588 None None None XRAY 1.9 0.172 0.23 A 277.0 261.0 15 29 14 15 [[425, 681]] 1.0 8xox Homo sapiens TYR_PTK2B_HUMAN TYR 2.4e-92 314.8 2.0 260.0 259.0 566 567 568 570 572 457 474 478 546 548 547 549.0 607 595 590 589 588 587 586 585 584 503 Protein-tyrosine kinase 2-beta
TYR PTK2B FAK2_HUMAN 5TOBA Q14289 420 690 1009.0 YAM:701 Type1 Inactive DFGin 6.6239 15.8925 None -80.12, -169.51 -62.87, 163.32 -68.81, 156.27 288.67, 73.8 -89.77, 999.0 in-none in 9.4038 Saltbr-none 999.0 HRD-in -91.14, -46.46 78.7, -8.23 none-none-none SNCnnn none-none ActLoopNT-none 999.0 ActLoopCT-none TYR APEdihe_nnnai APEdist_aaan APE10-dihe-none 999.0, 999.0 APE9-dihe-none 999.0, 999.0 APE8-dihe-none 999.0, 58.94 APE8-rot-na 29.17 APE67-dihe-in -80.81, -3.79 -54.7, -37.6 APE12-dist-na 999.0 APE11-dist-na 999.0 APE10-dist-na 999.0 APE9-dist-none 999.0 None None None XRAY 2.117 0.212 0.262 A 282.0 245.0 26 29 11 18 [[425, 681]] 1.0 5tob Homo sapiens TYR_PTK2B_HUMAN TYR 2.5e-92 314.8 2.0 260.0 259.0 566 567 568 570 572 457 474 478 546 548 547 549.0 607 595 590 589 588 587 586 585 584 503 Protein-tyrosine kinase 2-beta

Ligand: YAM

Total number of chains: 0
Active chains: 0
Total number of genes: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name