OTHER_POMK (Protein O-mannose kinase)

Total number of chains: 0
Active chains: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Gene PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name

OTHER_POMK (Protein O-mannose kinase)

Total number of chains: 3
Active chains: 0
Spatial label Dihedral label Number of Chains Percent Representative
DFGin ABAminus 2 66.7% 5GZ9A
DFGin None 1 33.3% 5GZAA
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
POMK SG196_DANRE 5GZAA Q5U3W1 53 342 347.0 ADP:401,ZZ1:405 ATPlike,Allosteric Pseudo DFGin 5.3569 13.1741 None -145.49, -53.43 -88.36, 87.6 -105.44, 34.02 303.67, 0.43 -66.19, -35.84 none-na none 999.0 Saltbr-na 999.0 HRD-out -76.02, 100.34 -84.46, -37.81 na-in-out SNCaio in-out ActLoopNT-in 3.1764 ActLoopCT-out nonTYR APEdihe_aaioo APEdist_iioo APE10-dihe-na -72.0, 131.22 APE9-dihe-na -98.58, 149.02 APE8-dihe-in -137.88, 170.05 APE8-rot-out 49.36 APE67-dihe-out -89.83, -15.07 100.95, 169.89 APE12-dist-in 12.1638 APE11-dist-in 13.9361 APE10-dist-out 17.3588 APE9-dist-out 9.4145 None None None XRAY 2.0 0.203 0.218 A 290.0 290.0 0 30 30 0 [[72, 335]] 1.0 5gza Danio rerio OTHER_POMK_DANRE POMK 3.3e-138 465.4 1.0 265.0 265.0 224 225 226 228 230 106 120 124 199 201 200 202.0 278 254 249 248 247 246 245 244 243 148 Protein O-mannose kinase
POMK SG196_MOUSE 5GZ9A Q3TUA9 54 337 349.0 ANP:1001,MAN:1004 ATPlike,Allosteric Pseudo DFGin 5.2933 13.0229 ABAminus -119.99, -54.35 -93.01, 108.48 -116.58, 23.4 308.09, 4.31 -55.72, -49.95 none-na none 999.0 Saltbr-na 999.0 HRD-out -81.79, 73.24 -60.09, -38.65 na-in-out SNCaio in-out ActLoopNT-in 3.248 ActLoopCT-out nonTYR APEdihe_aaiao APEdist_iioo APE10-dihe-na -60.33, 128.48 APE9-dihe-na -97.57, 144.89 APE8-dihe-in -131.17, 161.49 APE8-rot-na 301.17 APE67-dihe-out -101.62, -18.24 97.94, -172.65 APE12-dist-in 12.5486 APE11-dist-in 13.7295 APE10-dist-out 17.531 APE9-dist-out 9.7434 N66Q,N164Q None None XRAY 2.4 0.234 0.268 A 305.0 280.0 4 31 29 2 [[73, 337]] 1.0 5gz9 Mus musculus OTHER_POMK_MOUSE POMK 1.2e-147 496.2 1.0 265.0 265.0 225 226 227 229 231 107 121 125 200 202 201 203.0 280 256 251 250 249 248 247 246 245 149 Protein O-mannose kinase
POMK SG196_MOUSE 5GZ8A Q3TUA9 54 337 349.0 No_ligand No_ligand Pseudo DFGin 4.9361 13.2236 ABAminus -117.42, -46.49 -93.1, 109.24 -114.97, 25.11 303.9, 6.2 -83.07, -8.89 none-na none 999.0 Saltbr-na 999.0 HRD-out -78.55, 82.62 -71.19, -27.89 na-in-out SNCaio in-out ActLoopNT-in 3.2801 ActLoopCT-out nonTYR APEdihe_aaiao APEdist_iooo APE10-dihe-na -71.9, 132.75 APE9-dihe-na -101.64, 147.44 APE8-dihe-in -135.98, 164.92 APE8-rot-na 301.94 APE67-dihe-out -112.69, -14.59 101.92, -170.48 APE12-dist-in 13.0324 APE11-dist-out 14.2161 APE10-dist-out 18.0394 APE9-dist-out 9.7042 N66Q,N164Q None None XRAY 2.5 0.274 0.293 A 305.0 272.0 12 31 27 4 [[73, 337]] 1.0 5gz8 Mus musculus OTHER_POMK_MOUSE POMK 1.2e-147 496.2 1.0 265.0 265.0 225 226 227 229 231 107 121 125 200 202 201 203.0 280 256 251 250 249 248 247 246 245 149 Protein O-mannose kinase

OTHER_POMK (Protein O-mannose kinase)

Total number of chains: 3
Active chains: 0
Spatial label Dihedral label Number of Chains Percent Representative
DFGin ABAminus 2 66.7% 5GZ9A
DFGin None 1 33.3% 5GZAA
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
POMK SG196_DANRE 5GZAA Q5U3W1 53 342 347.0 ADP:401,ZZ1:405 ATPlike,Allosteric Pseudo DFGin 5.3569 13.1741 None -145.49, -53.43 -88.36, 87.6 -105.44, 34.02 303.67, 0.43 -66.19, -35.84 none-na none 999.0 Saltbr-na 999.0 HRD-out -76.02, 100.34 -84.46, -37.81 na-in-out SNCaio in-out ActLoopNT-in 3.1764 ActLoopCT-out nonTYR APEdihe_aaioo APEdist_iioo APE10-dihe-na -72.0, 131.22 APE9-dihe-na -98.58, 149.02 APE8-dihe-in -137.88, 170.05 APE8-rot-out 49.36 APE67-dihe-out -89.83, -15.07 100.95, 169.89 APE12-dist-in 12.1638 APE11-dist-in 13.9361 APE10-dist-out 17.3588 APE9-dist-out 9.4145 None None None XRAY 2.0 0.203 0.218 A 290.0 290.0 0 30 30 0 [[72, 335]] 1.0 5gza Danio rerio OTHER_POMK_DANRE POMK 3.3e-138 465.4 1.0 265.0 265.0 224 225 226 228 230 106 120 124 199 201 200 202.0 278 254 249 248 247 246 245 244 243 148 Protein O-mannose kinase
POMK SG196_MOUSE 5GZ9A Q3TUA9 54 337 349.0 ANP:1001,MAN:1004 ATPlike,Allosteric Pseudo DFGin 5.2933 13.0229 ABAminus -119.99, -54.35 -93.01, 108.48 -116.58, 23.4 308.09, 4.31 -55.72, -49.95 none-na none 999.0 Saltbr-na 999.0 HRD-out -81.79, 73.24 -60.09, -38.65 na-in-out SNCaio in-out ActLoopNT-in 3.248 ActLoopCT-out nonTYR APEdihe_aaiao APEdist_iioo APE10-dihe-na -60.33, 128.48 APE9-dihe-na -97.57, 144.89 APE8-dihe-in -131.17, 161.49 APE8-rot-na 301.17 APE67-dihe-out -101.62, -18.24 97.94, -172.65 APE12-dist-in 12.5486 APE11-dist-in 13.7295 APE10-dist-out 17.531 APE9-dist-out 9.7434 N66Q,N164Q None None XRAY 2.4 0.234 0.268 A 305.0 280.0 4 31 29 2 [[73, 337]] 1.0 5gz9 Mus musculus OTHER_POMK_MOUSE POMK 1.2e-147 496.2 1.0 265.0 265.0 225 226 227 229 231 107 121 125 200 202 201 203.0 280 256 251 250 249 248 247 246 245 149 Protein O-mannose kinase
POMK SG196_MOUSE 5GZ8A Q3TUA9 54 337 349.0 No_ligand No_ligand Pseudo DFGin 4.9361 13.2236 ABAminus -117.42, -46.49 -93.1, 109.24 -114.97, 25.11 303.9, 6.2 -83.07, -8.89 none-na none 999.0 Saltbr-na 999.0 HRD-out -78.55, 82.62 -71.19, -27.89 na-in-out SNCaio in-out ActLoopNT-in 3.2801 ActLoopCT-out nonTYR APEdihe_aaiao APEdist_iooo APE10-dihe-na -71.9, 132.75 APE9-dihe-na -101.64, 147.44 APE8-dihe-in -135.98, 164.92 APE8-rot-na 301.94 APE67-dihe-out -112.69, -14.59 101.92, -170.48 APE12-dist-in 13.0324 APE11-dist-out 14.2161 APE10-dist-out 18.0394 APE9-dist-out 9.7042 N66Q,N164Q None None XRAY 2.5 0.274 0.293 A 305.0 272.0 12 31 27 4 [[73, 337]] 1.0 5gz8 Mus musculus OTHER_POMK_MOUSE POMK 1.2e-147 496.2 1.0 265.0 265.0 225 226 227 229 231 107 121 125 200 202 201 203.0 280 256 251 250 249 248 247 246 245 149 Protein O-mannose kinase