Correlating residue numbering in the PDB
S2C
A database correlating sequence and atomic coordinate residue numbering
in the Protein Data Bank
This database contains files correlating the implicit residue numbering
in the SEQRES records of a PDB
file with the numbering found in the ATOM (coordinate) records.
A paper discussing this database has been submitted for publication.
We recommend you download the entire database. It is provided as a
compressed tar archive. Unpack the database in a suitable directory on
your file system so you can refer to the files easily from your own
programs and scripts when you want to correlate the SEQRES and ATOM
numbering schemes.
(File size: 472 MB compressed)
We also supply a FASTA formatted version of the PDB. The file is
compressed.
View a specific entry
You can also view a specific entry from the database by entering a PDB
code below. (It may take a few seconds to process your request;
Examples: 1bnk, 3hhr)
Database created by Guoli Wang
and Roland
L. Dunbrack, Jr. at the Institute for Cancer Research, Fox Chase Cancer Center, Philadelphia,
PA, USA.
Please report any errors or omissions in the database to Roland Dunbrack
(Roland.Dunbrack@fccc.edu).The
database was last updated on March 9, 2016.
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