PDB: 8FO8 — TKL LRRK2_HUMAN

Total number of chains: 2
Active chains: 0
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGinter None 2 100.0% 8FO8C
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
TKL LRRK2 LRRK2_HUMAN 8FO8C Q5S007 12 2527 2527.0 ATP:2602 ATPlike Inactive DFGinter 10.4041 8.3667 None -77.76, 115.2 -99.79, 16.57 -70.68, -24.12 178.89, 61.58 -64.22, -41.72 out-out out 11.3412 Saltbr-out 7.7439 HRD-in -73.07, -35.29 72.76, -10.32 out-out-out SNCooo out-out ActLoopNT-out 9.4707 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_iioi APE10-dihe-na -67.5, -18.26 APE9-dihe-na 74.89, 160.43 APE8-dihe-in -64.77, 133.4 APE8-rot-in 300.66 APE67-dihe-in -63.6, -35.05 -59.67, -34.64 APE12-dist-in 9.0713 APE11-dist-in 10.5217 APE10-dist-out 14.4112 APE9-dist-in 4.4488 None None None EM 3.88 999.0 999.0 C 2527.0 2270.0 4 26 23 3 [[1875, 2134]] 1.0 8fo8 TKL_LRRK2_HUMAN TKL 3.8e-57 200.3 5.0 266.0 262.0 2016 2017 2018 2020 2022 1906 1920 1924 1991 1993 1992 1994.0 2055 2042 2037 2036 2035 2034 2033 2032 2031 1948 Leucine-rich repeat serine/threonine-protein kinase 2
TKL LRRK2 LRRK2_HUMAN 8FO8E Q5S007 12 2527 2527.0 ATP:2602 ATPlike Inactive DFGinter 10.4146 8.3493 None -77.68, 115.13 -99.83, 16.55 -70.64, -24.07 178.91, 61.52 -64.18, -41.73 out-out out 11.3208 Saltbr-out 7.7298 HRD-in -73.0, -35.27 72.87, -10.42 out-out-out SNCooo out-out ActLoopNT-out 9.4702 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_iioi APE10-dihe-na -67.4, -18.35 APE9-dihe-na 74.93, 160.44 APE8-dihe-in -64.61, 133.34 APE8-rot-in 300.72 APE67-dihe-in -63.56, -35.05 -59.56, -34.8 APE12-dist-in 9.056 APE11-dist-in 10.5258 APE10-dist-out 14.406 APE9-dist-in 4.4342 None None None EM 3.88 999.0 999.0 E 2527.0 2270.0 4 26 23 3 [[1875, 2134]] 1.0 8fo8 TKL_LRRK2_HUMAN TKL 3.8e-57 200.3 5.0 266.0 262.0 2016 2017 2018 2020 2022 1906 1920 1924 1991 1993 1992 1994.0 2055 2042 2037 2036 2035 2034 2033 2032 2031 1948 Leucine-rich repeat serine/threonine-protein kinase 2

PDB: 8FO8 — TKL LRRK2_HUMAN

Total number of chains: 2
Active chains: 0
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGinter None 2 100.0% 8FO8C
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
TKL LRRK2 LRRK2_HUMAN 8FO8C Q5S007 12 2527 2527.0 ATP:2602 ATPlike Inactive DFGinter 10.4041 8.3667 None -77.76, 115.2 -99.79, 16.57 -70.68, -24.12 178.89, 61.58 -64.22, -41.72 out-out out 11.3412 Saltbr-out 7.7439 HRD-in -73.07, -35.29 72.76, -10.32 out-out-out SNCooo out-out ActLoopNT-out 9.4707 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_iioi APE10-dihe-na -67.5, -18.26 APE9-dihe-na 74.89, 160.43 APE8-dihe-in -64.77, 133.4 APE8-rot-in 300.66 APE67-dihe-in -63.6, -35.05 -59.67, -34.64 APE12-dist-in 9.0713 APE11-dist-in 10.5217 APE10-dist-out 14.4112 APE9-dist-in 4.4488 None None None EM 3.88 999.0 999.0 C 2527.0 2270.0 4 26 23 3 [[1875, 2134]] 1.0 8fo8 Homo sapiens TKL_LRRK2_HUMAN TKL 3.8e-57 200.3 5.0 266.0 262.0 2016 2017 2018 2020 2022 1906 1920 1924 1991 1993 1992 1994.0 2055 2042 2037 2036 2035 2034 2033 2032 2031 1948 Leucine-rich repeat serine/threonine-protein kinase 2
TKL LRRK2 LRRK2_HUMAN 8FO8E Q5S007 12 2527 2527.0 ATP:2602 ATPlike Inactive DFGinter 10.4146 8.3493 None -77.68, 115.13 -99.83, 16.55 -70.64, -24.07 178.91, 61.52 -64.18, -41.73 out-out out 11.3208 Saltbr-out 7.7298 HRD-in -73.0, -35.27 72.87, -10.42 out-out-out SNCooo out-out ActLoopNT-out 9.4702 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_iioi APE10-dihe-na -67.4, -18.35 APE9-dihe-na 74.93, 160.44 APE8-dihe-in -64.61, 133.34 APE8-rot-in 300.72 APE67-dihe-in -63.56, -35.05 -59.56, -34.8 APE12-dist-in 9.056 APE11-dist-in 10.5258 APE10-dist-out 14.406 APE9-dist-in 4.4342 None None None EM 3.88 999.0 999.0 E 2527.0 2270.0 4 26 23 3 [[1875, 2134]] 1.0 8fo8 Homo sapiens TKL_LRRK2_HUMAN TKL 3.8e-57 200.3 5.0 266.0 262.0 2016 2017 2018 2020 2022 1906 1920 1924 1991 1993 1992 1994.0 2055 2042 2037 2036 2035 2034 2033 2032 2031 1948 Leucine-rich repeat serine/threonine-protein kinase 2

PDB: 8FO8 — TKL LRRK2_HUMAN

Total number of chains: 0
Active chains: 0
Total number of genes: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name