PDB: 6J5V — 2 kinases

Total number of chains: 0
Active chains: 0
Total number of genes: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name

PDB: 6J5V — 2 kinases

Total number of chains: 2
Active chains: 0
Total number of genes: 2
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 1 50.0% 6J5VB
None None 1 50.0% 6J5VC
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
OTHER ZRK1 ZRK1_ARATH 6J5VB Q9SVY5 17 347 351.0 No_ligand No_ligand Inactive DFGin 5.1948 13.5031 BLAminus -148.89, -168.46 38.8, 63.08 -71.69, 79.32 303.42, 149.19 -138.17, 13.08 in-na in 9.5305 Saltbr-na 5.3374 HRD-out -111.33, 130.81 -88.3, 16.4 na-in-out SNCaio in-out ActLoopNT-in 2.8592 ActLoopCT-out nonTYR APEdihe_aaoii APEdist_iiii APE10-dihe-na -159.65, 139.82 APE9-dihe-na 116.37, 98.61 APE8-dihe-out 57.46, 74.47 APE8-rot-in 306.65 APE67-dihe-inflip 110.67, -31.12 -37.02, 130.61 APE12-dist-in 10.3742 APE11-dist-in 12.4554 APE10-dist-in 7.5205 APE9-dist-in 5.2463 None None None EM 4.25 999.0 999.0 B 351.0 327.0 4 30 30 0 [[62, 342]] 1.0 6j5v Arabidopsis thaliana OTHER_ZRK1_ARATH TKL 5.9e-36 130.4 14.0 266.0 253.0 208 209 210 212 214 87 107 111 188 190 189 191.0 250 238 233 232 231 230 229 228 227 138 Serine/threonine-protein kinase ZRK1
TKL PBL2 PBL2_ARATH 6J5VC O49839 172 367 426.0 U5P:501,U5P:502 Allosteric,Allosteric Inactive None 999.0 999.0 None -144.12, 140.93 60.27, 56.1 55.51, 999.0 284.35, 147.94 999.0, 999.0 none-none none 999.0 Saltbr-none 999.0 HRD-in -70.09, -38.16 72.48, -10.38 none-none-out SNCnno none-out ActLoopNT-none 999.0 ActLoopCT-out nonTYR APEdihe_aaooo APEdist_nnno APE10-dihe-na -72.04, 112.92 APE9-dihe-na 70.75, 69.87 APE8-dihe-out -71.07, -5.83 APE8-rot-out 78.25 APE67-dihe-out -66.69, 6.11 -139.41, -161.69 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-none 999.0 APE9-dist-out 6.2243 None None None EM 4.25 999.0 999.0 C 426.0 174.0 111 30 19 11 [[84, 368]] 1.0 6j5v Arabidopsis thaliana TKL_PBL2_ARATH TKL 1.7e-57 201.3 4.0 267.0 264.0 236 237 238 240 242 124 140 144 216 218 217 219.0 278 266 261 260 259 258 257 256 255 170 Probable serine/threonine-protein kinase PBL2

PDB: 6J5V — 2 kinases

Total number of chains: 2
Active chains: 0
Total number of genes: 2
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 1 50.0% 6J5VB
None None 1 50.0% 6J5VC
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
OTHER ZRK1 ZRK1_ARATH 6J5VB Q9SVY5 17 347 351.0 No_ligand No_ligand Inactive DFGin 5.1948 13.5031 BLAminus -148.89, -168.46 38.8, 63.08 -71.69, 79.32 303.42, 149.19 -138.17, 13.08 in-na in 9.5305 Saltbr-na 5.3374 HRD-out -111.33, 130.81 -88.3, 16.4 na-in-out SNCaio in-out ActLoopNT-in 2.8592 ActLoopCT-out nonTYR APEdihe_aaoii APEdist_iiii APE10-dihe-na -159.65, 139.82 APE9-dihe-na 116.37, 98.61 APE8-dihe-out 57.46, 74.47 APE8-rot-in 306.65 APE67-dihe-inflip 110.67, -31.12 -37.02, 130.61 APE12-dist-in 10.3742 APE11-dist-in 12.4554 APE10-dist-in 7.5205 APE9-dist-in 5.2463 None None None EM 4.25 999.0 999.0 B 351.0 327.0 4 30 30 0 [[62, 342]] 1.0 6j5v Arabidopsis thaliana OTHER_ZRK1_ARATH TKL 5.9e-36 130.4 14.0 266.0 253.0 208 209 210 212 214 87 107 111 188 190 189 191.0 250 238 233 232 231 230 229 228 227 138 Serine/threonine-protein kinase ZRK1
TKL PBL2 PBL2_ARATH 6J5VC O49839 172 367 426.0 U5P:501,U5P:502 Allosteric,Allosteric Inactive None 999.0 999.0 None -144.12, 140.93 60.27, 56.1 55.51, 999.0 284.35, 147.94 999.0, 999.0 none-none none 999.0 Saltbr-none 999.0 HRD-in -70.09, -38.16 72.48, -10.38 none-none-out SNCnno none-out ActLoopNT-none 999.0 ActLoopCT-out nonTYR APEdihe_aaooo APEdist_nnno APE10-dihe-na -72.04, 112.92 APE9-dihe-na 70.75, 69.87 APE8-dihe-out -71.07, -5.83 APE8-rot-out 78.25 APE67-dihe-out -66.69, 6.11 -139.41, -161.69 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-none 999.0 APE9-dist-out 6.2243 None None None EM 4.25 999.0 999.0 C 426.0 174.0 111 30 19 11 [[84, 368]] 1.0 6j5v Arabidopsis thaliana TKL_PBL2_ARATH TKL 1.7e-57 201.3 4.0 267.0 264.0 236 237 238 240 242 124 140 144 216 218 217 219.0 278 266 261 260 259 258 257 256 255 170 Probable serine/threonine-protein kinase PBL2