PDB: 6J5U — 2 kinases

Total number of chains: 0
Active chains: 0
Total number of genes: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name

PDB: 6J5U — 2 kinases

Total number of chains: 2
Active chains: 0
Total number of genes: 2
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 1 50.0% 6J5UB
None None 1 50.0% 6J5UC
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
OTHER ZRK1 ZRK1_ARATH 6J5UB Q9SVY5 17 347 351.0 No_ligand No_ligand Inactive DFGin 4.8649 13.2194 BLAminus -125.86, -169.86 37.75, 65.72 -70.64, 78.99 303.05, 172.54 -131.92, 2.32 in-na in 9.3569 Saltbr-na 6.1052 HRD-out -116.63, 124.33 -92.57, 25.08 na-in-out SNCaio in-out ActLoopNT-in 2.808 ActLoopCT-out nonTYR APEdihe_aaooi APEdist_iiii APE10-dihe-na -138.04, 135.66 APE9-dihe-na 118.43, 107.48 APE8-dihe-out 60.97, 78.11 APE8-rot-out 71.56 APE67-dihe-inflip 102.17, -42.2 -51.19, 136.83 APE12-dist-in 10.6026 APE11-dist-in 11.9629 APE10-dist-in 6.7239 APE9-dist-in 5.3261 None None None EM 3.9 999.0 999.0 B 351.0 327.0 4 30 30 0 [[62, 342]] 1.0 6j5u Arabidopsis thaliana OTHER_ZRK1_ARATH TKL 5.9e-36 130.4 14.0 266.0 253.0 208 209 210 212 214 87 107 111 188 190 189 191.0 250 238 233 232 231 230 229 228 227 138 Serine/threonine-protein kinase ZRK1
TKL PBL2 PBL2_ARATH 6J5UC O49839 172 367 426.0 U5P:501,U5P:502 Allosteric,Allosteric Inactive None 999.0 999.0 None -157.64, 163.64 58.94, 52.91 53.32, 999.0 287.13, 101.05 999.0, 999.0 none-none none 999.0 Saltbr-none 999.0 HRD-in -71.57, -23.84 71.97, -16.06 none-none-out SNCnno none-out ActLoopNT-none 999.0 ActLoopCT-out nonTYR APEdihe_aaooo APEdist_nnno APE10-dihe-na -74.04, 116.78 APE9-dihe-na 69.54, 67.24 APE8-dihe-out -69.55, -8.54 APE8-rot-out 180.72 APE67-dihe-out -63.37, 5.27 -139.72, -160.26 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-none 999.0 APE9-dist-out 6.714 None None None EM 3.9 999.0 999.0 C 426.0 174.0 111 30 19 11 [[84, 368]] 1.0 6j5u Arabidopsis thaliana TKL_PBL2_ARATH TKL 1.7e-57 201.3 4.0 267.0 264.0 236 237 238 240 242 124 140 144 216 218 217 219.0 278 266 261 260 259 258 257 256 255 170 Probable serine/threonine-protein kinase PBL2

PDB: 6J5U — 2 kinases

Total number of chains: 2
Active chains: 0
Total number of genes: 2
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 1 50.0% 6J5UB
None None 1 50.0% 6J5UC
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
OTHER ZRK1 ZRK1_ARATH 6J5UB Q9SVY5 17 347 351.0 No_ligand No_ligand Inactive DFGin 4.8649 13.2194 BLAminus -125.86, -169.86 37.75, 65.72 -70.64, 78.99 303.05, 172.54 -131.92, 2.32 in-na in 9.3569 Saltbr-na 6.1052 HRD-out -116.63, 124.33 -92.57, 25.08 na-in-out SNCaio in-out ActLoopNT-in 2.808 ActLoopCT-out nonTYR APEdihe_aaooi APEdist_iiii APE10-dihe-na -138.04, 135.66 APE9-dihe-na 118.43, 107.48 APE8-dihe-out 60.97, 78.11 APE8-rot-out 71.56 APE67-dihe-inflip 102.17, -42.2 -51.19, 136.83 APE12-dist-in 10.6026 APE11-dist-in 11.9629 APE10-dist-in 6.7239 APE9-dist-in 5.3261 None None None EM 3.9 999.0 999.0 B 351.0 327.0 4 30 30 0 [[62, 342]] 1.0 6j5u Arabidopsis thaliana OTHER_ZRK1_ARATH TKL 5.9e-36 130.4 14.0 266.0 253.0 208 209 210 212 214 87 107 111 188 190 189 191.0 250 238 233 232 231 230 229 228 227 138 Serine/threonine-protein kinase ZRK1
TKL PBL2 PBL2_ARATH 6J5UC O49839 172 367 426.0 U5P:501,U5P:502 Allosteric,Allosteric Inactive None 999.0 999.0 None -157.64, 163.64 58.94, 52.91 53.32, 999.0 287.13, 101.05 999.0, 999.0 none-none none 999.0 Saltbr-none 999.0 HRD-in -71.57, -23.84 71.97, -16.06 none-none-out SNCnno none-out ActLoopNT-none 999.0 ActLoopCT-out nonTYR APEdihe_aaooo APEdist_nnno APE10-dihe-na -74.04, 116.78 APE9-dihe-na 69.54, 67.24 APE8-dihe-out -69.55, -8.54 APE8-rot-out 180.72 APE67-dihe-out -63.37, 5.27 -139.72, -160.26 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-none 999.0 APE9-dist-out 6.714 None None None EM 3.9 999.0 999.0 C 426.0 174.0 111 30 19 11 [[84, 368]] 1.0 6j5u Arabidopsis thaliana TKL_PBL2_ARATH TKL 1.7e-57 201.3 4.0 267.0 264.0 236 237 238 240 242 124 140 144 216 218 217 219.0 278 266 261 260 259 258 257 256 255 170 Probable serine/threonine-protein kinase PBL2