PDB: 5NG3 — TKL RIPK2_HUMAN

Total number of chains: 4
Active chains: 0
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLBplus 4 100.0% 5NG3A
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
TKL RIPK2 RIPK2_HUMAN 5NG3A O43353 8 297 540.0 No_ligand No_ligand Inactive DFGin 5.5395 12.8991 BLBplus -112.38, 160.58 70.97, 23.75 -68.8, 144.03 47.35, 86.99 65.51, 12.2 out-none out 12.7512 Saltbr-none 999.0 HRD-in -71.1, -58.95 67.21, 2.05 none-out-out SNCnoo out-out ActLoopNT-out 9.7889 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_nooo APE10-dihe-na -127.51, 155.11 APE9-dihe-na -75.1, 166.99 APE8-dihe-in -61.92, 146.05 APE8-rot-out 193.53 APE67-dihe-in -56.91, -27.84 -109.89, 2.62 APE12-dist-none 999.0 APE11-dist-out 18.3793 APE10-dist-out 14.8698 APE9-dist-out 10.1617 K47R TPO111 TPO111 XRAY 2.6 0.234 0.269 A 304.0 284.0 6 33 27 6 [[18, 292]] 1.0 5ng3 TKL_RIPK2_HUMAN TKL 2.2e-72 249.8 4.0 266.0 263.0 163 164 165 167 169 47 66 70 143 145 144 146.0 211 196 191 190 189 188 187 186 185 96 Receptor-interacting serine/threonine-protein kinase 2
TKL RIPK2 RIPK2_HUMAN 5NG3B O43353 9 297 540.0 No_ligand No_ligand Inactive DFGin 5.6695 12.9014 BLBplus -112.34, 160.48 70.49, 24.2 -68.43, 144.17 47.17, 86.84 64.87, 12.81 out-none out 12.9136 Saltbr-none 999.0 HRD-in -70.57, -58.52 66.45, 2.64 none-out-out SNCnoo out-out ActLoopNT-out 9.7093 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_nnoo APE10-dihe-na 999.0, -51.15 APE9-dihe-na -75.96, 168.48 APE8-dihe-in -61.9, 146.98 APE8-rot-out 192.74 APE67-dihe-in -54.8, -29.64 -109.73, 3.83 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-out 14.1216 APE9-dist-out 9.6412 K47R None None XRAY 2.6 0.234 0.269 B 304.0 275.0 14 33 25 8 [[18, 292]] 1.0 5ng3 TKL_RIPK2_HUMAN TKL 2.2e-72 249.8 4.0 266.0 263.0 163 164 165 167 169 47 66 70 143 145 144 146.0 211 196 191 190 189 188 187 186 185 96 Receptor-interacting serine/threonine-protein kinase 2
TKL RIPK2 RIPK2_HUMAN 5NG3C O43353 9 297 540.0 No_ligand No_ligand Inactive DFGin 5.5896 12.944 BLBplus -112.71, 161.13 70.64, 23.93 -68.42, 144.19 47.15, 87.05 64.5, 12.74 out-none out 12.8447 Saltbr-none 999.0 HRD-in -71.02, -58.72 67.3, 1.13 none-out-out SNCnoo out-out ActLoopNT-out 9.8157 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_nnno APE10-dihe-na 999.0, 999.0 APE9-dihe-na 999.0, 160.87 APE8-dihe-in -62.18, 147.01 APE8-rot-out 192.72 APE67-dihe-in -54.87, -29.19 -109.49, 3.2 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-none 999.0 APE9-dist-out 9.9977 K47R None None XRAY 2.6 0.234 0.269 C 304.0 272.0 17 33 24 9 [[18, 292]] 1.0 5ng3 TKL_RIPK2_HUMAN TKL 2.2e-72 249.8 4.0 266.0 263.0 163 164 165 167 169 47 66 70 143 145 144 146.0 211 196 191 190 189 188 187 186 185 96 Receptor-interacting serine/threonine-protein kinase 2
TKL RIPK2 RIPK2_HUMAN 5NG3D O43353 9 297 540.0 No_ligand No_ligand Inactive DFGin 5.5736 12.8886 BLBplus -112.39, 160.12 71.59, 23.49 -69.04, 143.91 48.32, 92.26 67.92, 12.12 out-none out 12.805 Saltbr-none 999.0 HRD-in -69.99, -59.28 66.07, 2.93 none-out-out SNCnoo out-out ActLoopNT-out 9.6277 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_nooo APE10-dihe-na -124.38, 144.23 APE9-dihe-na -74.77, 167.56 APE8-dihe-in -63.05, 146.04 APE8-rot-out 193.19 APE67-dihe-in -62.45, -21.47 -111.58, 2.98 APE12-dist-none 999.0 APE11-dist-out 18.2155 APE10-dist-out 15.1103 APE9-dist-out 10.1475 K47R TPO111 TPO111 XRAY 2.6 0.234 0.269 D 304.0 279.0 10 33 27 6 [[18, 292]] 1.0 5ng3 TKL_RIPK2_HUMAN TKL 2.2e-72 249.8 4.0 266.0 263.0 163 164 165 167 169 47 66 70 143 145 144 146.0 211 196 191 190 189 188 187 186 185 96 Receptor-interacting serine/threonine-protein kinase 2

PDB: 5NG3 — TKL RIPK2_HUMAN

Total number of chains: 4
Active chains: 0
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLBplus 4 100.0% 5NG3A
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
TKL RIPK2 RIPK2_HUMAN 5NG3A O43353 8 297 540.0 No_ligand No_ligand Inactive DFGin 5.5395 12.8991 BLBplus -112.38, 160.58 70.97, 23.75 -68.8, 144.03 47.35, 86.99 65.51, 12.2 out-none out 12.7512 Saltbr-none 999.0 HRD-in -71.1, -58.95 67.21, 2.05 none-out-out SNCnoo out-out ActLoopNT-out 9.7889 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_nooo APE10-dihe-na -127.51, 155.11 APE9-dihe-na -75.1, 166.99 APE8-dihe-in -61.92, 146.05 APE8-rot-out 193.53 APE67-dihe-in -56.91, -27.84 -109.89, 2.62 APE12-dist-none 999.0 APE11-dist-out 18.3793 APE10-dist-out 14.8698 APE9-dist-out 10.1617 K47R TPO111 TPO111 XRAY 2.6 0.234 0.269 A 304.0 284.0 6 33 27 6 [[18, 292]] 1.0 5ng3 Homo sapiens TKL_RIPK2_HUMAN TKL 2.2e-72 249.8 4.0 266.0 263.0 163 164 165 167 169 47 66 70 143 145 144 146.0 211 196 191 190 189 188 187 186 185 96 Receptor-interacting serine/threonine-protein kinase 2
TKL RIPK2 RIPK2_HUMAN 5NG3B O43353 9 297 540.0 No_ligand No_ligand Inactive DFGin 5.6695 12.9014 BLBplus -112.34, 160.48 70.49, 24.2 -68.43, 144.17 47.17, 86.84 64.87, 12.81 out-none out 12.9136 Saltbr-none 999.0 HRD-in -70.57, -58.52 66.45, 2.64 none-out-out SNCnoo out-out ActLoopNT-out 9.7093 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_nnoo APE10-dihe-na 999.0, -51.15 APE9-dihe-na -75.96, 168.48 APE8-dihe-in -61.9, 146.98 APE8-rot-out 192.74 APE67-dihe-in -54.8, -29.64 -109.73, 3.83 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-out 14.1216 APE9-dist-out 9.6412 K47R None None XRAY 2.6 0.234 0.269 B 304.0 275.0 14 33 25 8 [[18, 292]] 1.0 5ng3 Homo sapiens TKL_RIPK2_HUMAN TKL 2.2e-72 249.8 4.0 266.0 263.0 163 164 165 167 169 47 66 70 143 145 144 146.0 211 196 191 190 189 188 187 186 185 96 Receptor-interacting serine/threonine-protein kinase 2
TKL RIPK2 RIPK2_HUMAN 5NG3C O43353 9 297 540.0 No_ligand No_ligand Inactive DFGin 5.5896 12.944 BLBplus -112.71, 161.13 70.64, 23.93 -68.42, 144.19 47.15, 87.05 64.5, 12.74 out-none out 12.8447 Saltbr-none 999.0 HRD-in -71.02, -58.72 67.3, 1.13 none-out-out SNCnoo out-out ActLoopNT-out 9.8157 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_nnno APE10-dihe-na 999.0, 999.0 APE9-dihe-na 999.0, 160.87 APE8-dihe-in -62.18, 147.01 APE8-rot-out 192.72 APE67-dihe-in -54.87, -29.19 -109.49, 3.2 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-none 999.0 APE9-dist-out 9.9977 K47R None None XRAY 2.6 0.234 0.269 C 304.0 272.0 17 33 24 9 [[18, 292]] 1.0 5ng3 Homo sapiens TKL_RIPK2_HUMAN TKL 2.2e-72 249.8 4.0 266.0 263.0 163 164 165 167 169 47 66 70 143 145 144 146.0 211 196 191 190 189 188 187 186 185 96 Receptor-interacting serine/threonine-protein kinase 2
TKL RIPK2 RIPK2_HUMAN 5NG3D O43353 9 297 540.0 No_ligand No_ligand Inactive DFGin 5.5736 12.8886 BLBplus -112.39, 160.12 71.59, 23.49 -69.04, 143.91 48.32, 92.26 67.92, 12.12 out-none out 12.805 Saltbr-none 999.0 HRD-in -69.99, -59.28 66.07, 2.93 none-out-out SNCnoo out-out ActLoopNT-out 9.6277 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_nooo APE10-dihe-na -124.38, 144.23 APE9-dihe-na -74.77, 167.56 APE8-dihe-in -63.05, 146.04 APE8-rot-out 193.19 APE67-dihe-in -62.45, -21.47 -111.58, 2.98 APE12-dist-none 999.0 APE11-dist-out 18.2155 APE10-dist-out 15.1103 APE9-dist-out 10.1475 K47R TPO111 TPO111 XRAY 2.6 0.234 0.269 D 304.0 279.0 10 33 27 6 [[18, 292]] 1.0 5ng3 Homo sapiens TKL_RIPK2_HUMAN TKL 2.2e-72 249.8 4.0 266.0 263.0 163 164 165 167 169 47 66 70 143 145 144 146.0 211 196 191 190 189 188 187 186 185 96 Receptor-interacting serine/threonine-protein kinase 2

PDB: 5NG3 — TKL RIPK2_HUMAN

Total number of chains: 0
Active chains: 0
Total number of genes: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name