PDB: 3D7U — 2 kinases

Total number of chains: 2
Active chains: 0
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% 3D7UA
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
TYR CSK CSK_HUMAN 3D7UA P41240 188 450 450.0 No_ligand No_ligand None DFGin 7.0244 13.1175 BLAminus -139.73, -167.84 53.51, 74.77 -92.77, 23.91 306.2, 90.91 -52.72, -52.05 in-in in 8.2613 Saltbr-in 2.5434 HRD-in -75.91, -39.41 59.37, 3.93 in-in-none SNCiin in-none ActLoopNT-in 2.9033 ActLoopCT-none TYR APEdihe_niiai APEdist_aaai APE10-dihe-none 999.0, 146.18 APE9-dihe-in -90.57, 133.68 APE8-dihe-in -63.86, 107.61 APE8-rot-na 30.93 APE67-dihe-in -66.76, -13.54 -46.29, -47.12 APE12-dist-na 999.0 APE11-dist-na 999.0 APE10-dist-na 9.8958 APE9-dist-in 4.9451 None None None XRAY 4.111 0.294 0.302 A 263.0 257.0 6 25 19 6 [[195, 442]] 1.0 3d7u TYR_CSK_HUMAN TYR 9.6e-88 299.8 1.0 260.0 260.0 331 332 333 335 337 222 236 240 311 313 312 314.0 368 356 351 350 349 348 347 346 345 267 Tyrosine-protein kinase CSK
TYR CSK CSK_HUMAN 3D7UC P41240 188 450 450.0 No_ligand No_ligand None DFGin 7.0239 13.1185 BLAminus -139.69, -167.9 53.63, 74.8 -92.81, 23.87 306.29, 90.94 -52.77, -51.99 in-in in 8.2621 Saltbr-in 2.5433 HRD-in -75.91, -39.47 59.39, 4.04 in-in-none SNCiin in-none ActLoopNT-in 2.9045 ActLoopCT-none TYR APEdihe_niiai APEdist_aaai APE10-dihe-none 999.0, 146.11 APE9-dihe-in -90.53, 133.8 APE8-dihe-in -64.03, 107.64 APE8-rot-na 30.96 APE67-dihe-in -66.6, -13.57 -46.35, -47.16 APE12-dist-na 999.0 APE11-dist-na 999.0 APE10-dist-na 9.8973 APE9-dist-in 4.9454 None None None XRAY 4.111 0.294 0.302 C 263.0 257.0 6 25 19 6 [[195, 442]] 1.0 3d7u TYR_CSK_HUMAN TYR 9.6e-88 299.8 1.0 260.0 260.0 331 332 333 335 337 222 236 240 311 313 312 314.0 368 356 351 350 349 348 347 346 345 267 Tyrosine-protein kinase CSK

PDB: 3D7U — 2 kinases

Total number of chains: 4
Active chains: 0
Total number of genes: 2
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 50.0% 3D7UA
None None 2 50.0% 3D7UB
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
TYR SRC SRC_CHICK 3D7UB P00523 260 523 533.0 No_ligand No_ligand Inactive None 999.0 999.0 None 158.82, -179.56 -171.62, 999.0 999.0, 999.0 999.0, 999.0 999.0, 999.0 in-out in 8.6709 Saltbr-out 7.1144 HRD-in -78.6, -52.49 82.32, -0.66 out-none-out SNCono none-out ActLoopNT-none 999.0 ActLoopCT-out TYR APEdihe_nniai APEdist_aaao APE10-dihe-none 999.0, 999.0 APE9-dihe-none 999.0, 121.74 APE8-dihe-in -95.33, 68.83 APE8-rot-na 39.23 APE67-dihe-in -66.04, -26.77 -65.24, -36.93 APE12-dist-na 999.0 APE11-dist-na 999.0 APE10-dist-na 999.0 APE9-dist-out 9.3178 None None None XRAY 4.111 0.294 0.302 B 277.0 245.0 19 29 10 19 [[267, 518]] 1.0 3d7u Gallus gallus TYR_SRC_CHICK TYR 3e-94 321.1 1.0 260.0 260.0 403 404 405 407 409 295 310 314 383 385 384 386.0 444 432 427 426 425 424 423 422 421 339 Proto-oncogene tyrosine-protein kinase Src
TYR SRC SRC_CHICK 3D7UD P00523 260 523 533.0 No_ligand No_ligand Inactive None 999.0 999.0 None 158.86, -179.52 -171.63, 999.0 999.0, 999.0 999.0, 999.0 999.0, 999.0 in-out in 8.6719 Saltbr-out 7.0904 HRD-in -78.67, -52.34 82.11, -0.51 out-none-out SNCono none-out ActLoopNT-none 999.0 ActLoopCT-out TYR APEdihe_nniai APEdist_aaao APE10-dihe-none 999.0, 999.0 APE9-dihe-none 999.0, 121.7 APE8-dihe-in -95.26, 68.82 APE8-rot-na 39.23 APE67-dihe-in -66.01, -26.81 -65.34, -36.9 APE12-dist-na 999.0 APE11-dist-na 999.0 APE10-dist-na 999.0 APE9-dist-out 9.3181 None None None XRAY 4.111 0.294 0.302 D 277.0 245.0 19 29 10 19 [[267, 518]] 1.0 3d7u Gallus gallus TYR_SRC_CHICK TYR 3e-94 321.1 1.0 260.0 260.0 403 404 405 407 409 295 310 314 383 385 384 386.0 444 432 427 426 425 424 423 422 421 339 Proto-oncogene tyrosine-protein kinase Src
TYR CSK CSK_HUMAN 3D7UA P41240 188 450 450.0 No_ligand No_ligand None DFGin 7.0244 13.1175 BLAminus -139.73, -167.84 53.51, 74.77 -92.77, 23.91 306.2, 90.91 -52.72, -52.05 in-in in 8.2613 Saltbr-in 2.5434 HRD-in -75.91, -39.41 59.37, 3.93 in-in-none SNCiin in-none ActLoopNT-in 2.9033 ActLoopCT-none TYR APEdihe_niiai APEdist_aaai APE10-dihe-none 999.0, 146.18 APE9-dihe-in -90.57, 133.68 APE8-dihe-in -63.86, 107.61 APE8-rot-na 30.93 APE67-dihe-in -66.76, -13.54 -46.29, -47.12 APE12-dist-na 999.0 APE11-dist-na 999.0 APE10-dist-na 9.8958 APE9-dist-in 4.9451 None None None XRAY 4.111 0.294 0.302 A 263.0 257.0 6 25 19 6 [[195, 442]] 1.0 3d7u Homo sapiens TYR_CSK_HUMAN TYR 9.6e-88 299.8 1.0 260.0 260.0 331 332 333 335 337 222 236 240 311 313 312 314.0 368 356 351 350 349 348 347 346 345 267 Tyrosine-protein kinase CSK
TYR CSK CSK_HUMAN 3D7UC P41240 188 450 450.0 No_ligand No_ligand None DFGin 7.0239 13.1185 BLAminus -139.69, -167.9 53.63, 74.8 -92.81, 23.87 306.29, 90.94 -52.77, -51.99 in-in in 8.2621 Saltbr-in 2.5433 HRD-in -75.91, -39.47 59.39, 4.04 in-in-none SNCiin in-none ActLoopNT-in 2.9045 ActLoopCT-none TYR APEdihe_niiai APEdist_aaai APE10-dihe-none 999.0, 146.11 APE9-dihe-in -90.53, 133.8 APE8-dihe-in -64.03, 107.64 APE8-rot-na 30.96 APE67-dihe-in -66.6, -13.57 -46.35, -47.16 APE12-dist-na 999.0 APE11-dist-na 999.0 APE10-dist-na 9.8973 APE9-dist-in 4.9454 None None None XRAY 4.111 0.294 0.302 C 263.0 257.0 6 25 19 6 [[195, 442]] 1.0 3d7u Homo sapiens TYR_CSK_HUMAN TYR 9.6e-88 299.8 1.0 260.0 260.0 331 332 333 335 337 222 236 240 311 313 312 314.0 368 356 351 350 349 348 347 346 345 267 Tyrosine-protein kinase CSK

PDB: 3D7U — 2 kinases

Total number of chains: 2
Active chains: 0
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
None None 2 100.0% 3D7UB
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
TYR SRC SRC_CHICK 3D7UB P00523 260 523 533.0 No_ligand No_ligand Inactive None 999.0 999.0 None 158.82, -179.56 -171.62, 999.0 999.0, 999.0 999.0, 999.0 999.0, 999.0 in-out in 8.6709 Saltbr-out 7.1144 HRD-in -78.6, -52.49 82.32, -0.66 out-none-out SNCono none-out ActLoopNT-none 999.0 ActLoopCT-out TYR APEdihe_nniai APEdist_aaao APE10-dihe-none 999.0, 999.0 APE9-dihe-none 999.0, 121.74 APE8-dihe-in -95.33, 68.83 APE8-rot-na 39.23 APE67-dihe-in -66.04, -26.77 -65.24, -36.93 APE12-dist-na 999.0 APE11-dist-na 999.0 APE10-dist-na 999.0 APE9-dist-out 9.3178 None None None XRAY 4.111 0.294 0.302 B 277.0 245.0 19 29 10 19 [[267, 518]] 1.0 3d7u Gallus gallus TYR_SRC_CHICK TYR 3e-94 321.1 1.0 260.0 260.0 403 404 405 407 409 295 310 314 383 385 384 386.0 444 432 427 426 425 424 423 422 421 339 Proto-oncogene tyrosine-protein kinase Src
TYR SRC SRC_CHICK 3D7UD P00523 260 523 533.0 No_ligand No_ligand Inactive None 999.0 999.0 None 158.86, -179.52 -171.63, 999.0 999.0, 999.0 999.0, 999.0 999.0, 999.0 in-out in 8.6719 Saltbr-out 7.0904 HRD-in -78.67, -52.34 82.11, -0.51 out-none-out SNCono none-out ActLoopNT-none 999.0 ActLoopCT-out TYR APEdihe_nniai APEdist_aaao APE10-dihe-none 999.0, 999.0 APE9-dihe-none 999.0, 121.7 APE8-dihe-in -95.26, 68.82 APE8-rot-na 39.23 APE67-dihe-in -66.01, -26.81 -65.34, -36.9 APE12-dist-na 999.0 APE11-dist-na 999.0 APE10-dist-na 999.0 APE9-dist-out 9.3181 None None None XRAY 4.111 0.294 0.302 D 277.0 245.0 19 29 10 19 [[267, 518]] 1.0 3d7u Gallus gallus TYR_SRC_CHICK TYR 3e-94 321.1 1.0 260.0 260.0 403 404 405 407 409 295 310 314 383 385 384 386.0 444 432 427 426 425 424 423 422 421 339 Proto-oncogene tyrosine-protein kinase Src