TKL_LYS6 (non-specific serine/threonine protein kinase)

Total number of chains: 0
Active chains: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Gene PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name

TKL_LYS6 (non-specific serine/threonine protein kinase)

Total number of chains: 4
Active chains: 0
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLBplus 4 100.0% 9GB9B
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
LYS6 D3KTZ6_LOTJA 9GB9A D3KTZ6 306 599 622.0 No_ligand No_ligand Inactive DFGin 6.1236 15.751 BLBplus -109.21, 156.94 72.76, 33.02 -89.62, 157.54 68.99, 96.68 70.5, 9.68 out-out out 16.2977 Saltbr-out 15.8962 HRD-in -65.45, -52.71 76.05, -7.83 out-out-out SNCooo out-out ActLoopNT-out 8.4918 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_oooi APE10-dihe-na -90.51, 135.39 APE9-dihe-na 148.37, -178.34 APE8-dihe-in -134.42, 134.94 APE8-rot-in 298.13 APE67-dihe-inflip 96.95, -9.83 -56.08, 132.78 APE12-dist-out 14.1631 APE11-dist-out 14.5087 APE10-dist-out 9.0075 APE9-dist-in 4.0009 D460N None None XRAY 1.85 0.21 0.242 A 297.0 275.0 19 30 23 7 [[320, 596]] 1.0 9gb9 Lotus japonicus TKL_LYS6_LOTJA TKL 3.1e-63 219.7 3.0 264.0 262.0 459 460 461 463 465 350 363 367 439 441 440 442.0 501 489 484 483 482 481 480 479 478 392 non-specific serine/threonine protein kinase
LYS6 D3KTZ6_LOTJA 9GB9B D3KTZ6 306 599 622.0 No_ligand No_ligand Inactive DFGin 6.3237 15.5754 BLBplus -113.06, 155.03 71.69, 32.05 -84.98, 156.62 63.11, 94.98 80.21, 13.06 out-out out 16.2871 Saltbr-out 17.457 HRD-in -64.51, -57.84 78.34, -2.99 out-out-out SNCooo out-out ActLoopNT-out 8.5403 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_iioi APE10-dihe-na -86.23, 136.59 APE9-dihe-na 149.03, 164.07 APE8-dihe-in -130.53, 128.2 APE8-rot-in 289.83 APE67-dihe-inflip 96.08, -14.5 -51.16, 134.01 APE12-dist-in 12.3507 APE11-dist-in 13.8321 APE10-dist-out 8.6692 APE9-dist-in 4.1846 D460N None None XRAY 1.85 0.21 0.242 B 297.0 283.0 11 30 28 2 [[320, 596]] 1.0 9gb9 Lotus japonicus TKL_LYS6_LOTJA TKL 3.1e-63 219.7 3.0 264.0 262.0 459 460 461 463 465 350 363 367 439 441 440 442.0 501 489 484 483 482 481 480 479 478 392 non-specific serine/threonine protein kinase
LYS6 D3KTZ6_LOTJA 9GB9C D3KTZ6 306 599 622.0 No_ligand No_ligand Inactive DFGin 6.3468 15.557 BLBplus -110.39, 153.09 74.48, 30.6 -83.31, 155.82 63.07, 94.43 81.44, 20.26 out-out out 16.1264 Saltbr-out 17.9093 HRD-in -66.35, -54.99 76.05, -2.3 out-out-out SNCooo out-out ActLoopNT-out 8.3251 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_iioi APE10-dihe-na -86.62, 135.17 APE9-dihe-na 155.25, 164.29 APE8-dihe-in -128.34, 130.93 APE8-rot-in 286.72 APE67-dihe-inflip 97.99, -13.97 -57.34, 133.2 APE12-dist-in 12.0758 APE11-dist-in 13.4375 APE10-dist-out 8.4581 APE9-dist-in 4.121 D460N None None XRAY 1.85 0.21 0.242 C 297.0 282.0 12 30 26 4 [[320, 596]] 1.0 9gb9 Lotus japonicus TKL_LYS6_LOTJA TKL 3.1e-63 219.7 3.0 264.0 262.0 459 460 461 463 465 350 363 367 439 441 440 442.0 501 489 484 483 482 481 480 479 478 392 non-specific serine/threonine protein kinase
LYS6 D3KTZ6_LOTJA 9GB9D D3KTZ6 306 599 622.0 No_ligand No_ligand Inactive DFGin 5.6844 16.0995 BLBplus -108.3, 156.56 75.28, 29.33 -82.18, 153.48 75.51, 102.57 73.06, 14.94 out-out out 16.5044 Saltbr-out 18.0388 HRD-in -66.12, -54.7 76.04, -4.79 out-out-out SNCooo out-out ActLoopNT-out 8.3711 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_oooi APE10-dihe-na -98.33, 124.23 APE9-dihe-na 150.08, -175.74 APE8-dihe-in -132.38, 131.21 APE8-rot-in 296.91 APE67-dihe-inflip 92.18, -13.4 -51.78, 138.89 APE12-dist-out 14.1698 APE11-dist-out 14.6112 APE10-dist-out 9.1924 APE9-dist-in 3.9794 D460N None None XRAY 1.85 0.21 0.242 D 297.0 277.0 17 30 26 4 [[320, 596]] 1.0 9gb9 Lotus japonicus TKL_LYS6_LOTJA TKL 3.1e-63 219.7 3.0 264.0 262.0 459 460 461 463 465 350 363 367 439 441 440 442.0 501 489 484 483 482 481 480 479 478 392 non-specific serine/threonine protein kinase

TKL_LYS6 (non-specific serine/threonine protein kinase)

Total number of chains: 4
Active chains: 0
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLBplus 4 100.0% 9GB9B
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
LYS6 D3KTZ6_LOTJA 9GB9A D3KTZ6 306 599 622.0 No_ligand No_ligand Inactive DFGin 6.1236 15.751 BLBplus -109.21, 156.94 72.76, 33.02 -89.62, 157.54 68.99, 96.68 70.5, 9.68 out-out out 16.2977 Saltbr-out 15.8962 HRD-in -65.45, -52.71 76.05, -7.83 out-out-out SNCooo out-out ActLoopNT-out 8.4918 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_oooi APE10-dihe-na -90.51, 135.39 APE9-dihe-na 148.37, -178.34 APE8-dihe-in -134.42, 134.94 APE8-rot-in 298.13 APE67-dihe-inflip 96.95, -9.83 -56.08, 132.78 APE12-dist-out 14.1631 APE11-dist-out 14.5087 APE10-dist-out 9.0075 APE9-dist-in 4.0009 D460N None None XRAY 1.85 0.21 0.242 A 297.0 275.0 19 30 23 7 [[320, 596]] 1.0 9gb9 Lotus japonicus TKL_LYS6_LOTJA TKL 3.1e-63 219.7 3.0 264.0 262.0 459 460 461 463 465 350 363 367 439 441 440 442.0 501 489 484 483 482 481 480 479 478 392 non-specific serine/threonine protein kinase
LYS6 D3KTZ6_LOTJA 9GB9B D3KTZ6 306 599 622.0 No_ligand No_ligand Inactive DFGin 6.3237 15.5754 BLBplus -113.06, 155.03 71.69, 32.05 -84.98, 156.62 63.11, 94.98 80.21, 13.06 out-out out 16.2871 Saltbr-out 17.457 HRD-in -64.51, -57.84 78.34, -2.99 out-out-out SNCooo out-out ActLoopNT-out 8.5403 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_iioi APE10-dihe-na -86.23, 136.59 APE9-dihe-na 149.03, 164.07 APE8-dihe-in -130.53, 128.2 APE8-rot-in 289.83 APE67-dihe-inflip 96.08, -14.5 -51.16, 134.01 APE12-dist-in 12.3507 APE11-dist-in 13.8321 APE10-dist-out 8.6692 APE9-dist-in 4.1846 D460N None None XRAY 1.85 0.21 0.242 B 297.0 283.0 11 30 28 2 [[320, 596]] 1.0 9gb9 Lotus japonicus TKL_LYS6_LOTJA TKL 3.1e-63 219.7 3.0 264.0 262.0 459 460 461 463 465 350 363 367 439 441 440 442.0 501 489 484 483 482 481 480 479 478 392 non-specific serine/threonine protein kinase
LYS6 D3KTZ6_LOTJA 9GB9C D3KTZ6 306 599 622.0 No_ligand No_ligand Inactive DFGin 6.3468 15.557 BLBplus -110.39, 153.09 74.48, 30.6 -83.31, 155.82 63.07, 94.43 81.44, 20.26 out-out out 16.1264 Saltbr-out 17.9093 HRD-in -66.35, -54.99 76.05, -2.3 out-out-out SNCooo out-out ActLoopNT-out 8.3251 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_iioi APE10-dihe-na -86.62, 135.17 APE9-dihe-na 155.25, 164.29 APE8-dihe-in -128.34, 130.93 APE8-rot-in 286.72 APE67-dihe-inflip 97.99, -13.97 -57.34, 133.2 APE12-dist-in 12.0758 APE11-dist-in 13.4375 APE10-dist-out 8.4581 APE9-dist-in 4.121 D460N None None XRAY 1.85 0.21 0.242 C 297.0 282.0 12 30 26 4 [[320, 596]] 1.0 9gb9 Lotus japonicus TKL_LYS6_LOTJA TKL 3.1e-63 219.7 3.0 264.0 262.0 459 460 461 463 465 350 363 367 439 441 440 442.0 501 489 484 483 482 481 480 479 478 392 non-specific serine/threonine protein kinase
LYS6 D3KTZ6_LOTJA 9GB9D D3KTZ6 306 599 622.0 No_ligand No_ligand Inactive DFGin 5.6844 16.0995 BLBplus -108.3, 156.56 75.28, 29.33 -82.18, 153.48 75.51, 102.57 73.06, 14.94 out-out out 16.5044 Saltbr-out 18.0388 HRD-in -66.12, -54.7 76.04, -4.79 out-out-out SNCooo out-out ActLoopNT-out 8.3711 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_oooi APE10-dihe-na -98.33, 124.23 APE9-dihe-na 150.08, -175.74 APE8-dihe-in -132.38, 131.21 APE8-rot-in 296.91 APE67-dihe-inflip 92.18, -13.4 -51.78, 138.89 APE12-dist-out 14.1698 APE11-dist-out 14.6112 APE10-dist-out 9.1924 APE9-dist-in 3.9794 D460N None None XRAY 1.85 0.21 0.242 D 297.0 277.0 17 30 26 4 [[320, 596]] 1.0 9gb9 Lotus japonicus TKL_LYS6_LOTJA TKL 3.1e-63 219.7 3.0 264.0 262.0 459 460 461 463 465 350 363 367 439 441 440 442.0 501 489 484 483 482 481 480 479 478 392 non-specific serine/threonine protein kinase