PDB: AF-Q86Y07 — CK1 VRK2_HUMAN

Total number of chains: 2
Active chains: 2
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% AF-Q86Y07-K1A
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
CK1 VRK2 VRK2_HUMAN AF-Q86Y07-K1A Q86Y07 21 323 508.0 No_ligand No_ligand Active DFGin 7.9476 14.7984 BLAminus -119.05, 177.71 65.11, 69.16 -80.5, 23.83 289.5, 88.67 -62.34, -29.88 in-in in 8.0198 Saltbr-in 2.6572 HRD-in -84.77, -50.44 77.78, 0.96 in-in-in SNCiii in-in ActLoopNT-in 2.909 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -61.7, 143.45 APE9-dihe-na 96.44, -172.51 APE8-dihe-in -74.74, 115.77 APE8-rot-in 298.71 APE67-dihe-in -66.17, -30.1 -53.98, -39.95 APE12-dist-in 13.6026 APE11-dist-in 13.4404 APE10-dist-in 7.7494 APE9-dist-in 4.3637 None None None AF2 -1.0 1.0 1.0 A 303.0 303.0 0 35 35 0 [[29, 315]] 1.0 AF-Q86Y07-K1 CK1_VRK2_HUMAN CK1 1.2e-103 352.0 1.0 261.0 261.0 185 186 187 189 191 61 73 77 163 165 164 166.0 232 220 215 214 213 212 211 210 209 122 Serine/threonine-protein kinase VRK2
CK1 VRK2 VRK2_HUMAN AF-Q86Y07-K3A Q86Y07 21 323 508.0 No_ligand No_ligand Active DFGin 7.8466 14.4688 BLAminus -115.0, 179.72 63.98, 65.55 -78.94, 22.97 296.3, 84.35 -64.97, -24.45 in-in in 7.6164 Saltbr-in 2.7356 HRD-in -82.47, -50.04 76.81, -12.36 in-in-in SNCiii in-in ActLoopNT-in 2.935 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -64.52, 146.14 APE9-dihe-na 93.49, -170.52 APE8-dihe-in -75.59, 116.8 APE8-rot-in 299.91 APE67-dihe-in -57.82, -37.72 -53.79, -34.98 APE12-dist-in 13.7844 APE11-dist-in 13.5251 APE10-dist-in 7.937 APE9-dist-in 4.3311 None None None AF2 -1.0 1.0 1.0 A 303.0 303.0 0 35 35 0 [[29, 315]] 1.0 AF-Q86Y07-K3 CK1_VRK2_HUMAN CK1 1.2e-103 352.0 1.0 261.0 261.0 185 186 187 189 191 61 73 77 163 165 164 166.0 232 220 215 214 213 212 211 210 209 122 Serine/threonine-protein kinase VRK2

PDB: AF-Q86Y07 — CK1 VRK2_HUMAN

Total number of chains: 2
Active chains: 2
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% AF-Q86Y07-K1A
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
CK1 VRK2 VRK2_HUMAN AF-Q86Y07-K1A Q86Y07 21 323 508.0 No_ligand No_ligand Active DFGin 7.9476 14.7984 BLAminus -119.05, 177.71 65.11, 69.16 -80.5, 23.83 289.5, 88.67 -62.34, -29.88 in-in in 8.0198 Saltbr-in 2.6572 HRD-in -84.77, -50.44 77.78, 0.96 in-in-in SNCiii in-in ActLoopNT-in 2.909 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -61.7, 143.45 APE9-dihe-na 96.44, -172.51 APE8-dihe-in -74.74, 115.77 APE8-rot-in 298.71 APE67-dihe-in -66.17, -30.1 -53.98, -39.95 APE12-dist-in 13.6026 APE11-dist-in 13.4404 APE10-dist-in 7.7494 APE9-dist-in 4.3637 None None None AF2 -1.0 1.0 1.0 A 303.0 303.0 0 35 35 0 [[29, 315]] 1.0 AF-Q86Y07-K1 Homo sapiens CK1_VRK2_HUMAN CK1 1.2e-103 352.0 1.0 261.0 261.0 185 186 187 189 191 61 73 77 163 165 164 166.0 232 220 215 214 213 212 211 210 209 122 Serine/threonine-protein kinase VRK2
CK1 VRK2 VRK2_HUMAN AF-Q86Y07-K3A Q86Y07 21 323 508.0 No_ligand No_ligand Active DFGin 7.8466 14.4688 BLAminus -115.0, 179.72 63.98, 65.55 -78.94, 22.97 296.3, 84.35 -64.97, -24.45 in-in in 7.6164 Saltbr-in 2.7356 HRD-in -82.47, -50.04 76.81, -12.36 in-in-in SNCiii in-in ActLoopNT-in 2.935 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -64.52, 146.14 APE9-dihe-na 93.49, -170.52 APE8-dihe-in -75.59, 116.8 APE8-rot-in 299.91 APE67-dihe-in -57.82, -37.72 -53.79, -34.98 APE12-dist-in 13.7844 APE11-dist-in 13.5251 APE10-dist-in 7.937 APE9-dist-in 4.3311 None None None AF2 -1.0 1.0 1.0 A 303.0 303.0 0 35 35 0 [[29, 315]] 1.0 AF-Q86Y07-K3 Homo sapiens CK1_VRK2_HUMAN CK1 1.2e-103 352.0 1.0 261.0 261.0 185 186 187 189 191 61 73 77 163 165 164 166.0 232 220 215 214 213 212 211 210 209 122 Serine/threonine-protein kinase VRK2

PDB: AF-Q86Y07 — CK1 VRK2_HUMAN

Total number of chains: 0
Active chains: 0
Total number of genes: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name