PDB: AF-P50750 — CMGC CDK9_HUMAN

Total number of chains: 2
Active chains: 2
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% AF-P50750-K1A
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
CMGC CDK9 CDK9_HUMAN AF-P50750-K1A P50750 11 323 372.0 No_ligand No_ligand Active DFGin 6.8042 15.1653 BLAminus -137.37, 173.37 64.39, 60.59 -77.02, 16.85 288.83, 77.77 -62.06, -30.21 in-in in 8.5177 Saltbr-in 2.7095 HRD-in -74.93, -50.16 64.15, 10.46 in-in-in SNCiii in-in ActLoopNT-in 2.8146 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -118.96, 171.33 APE9-dihe-na 63.33, 135.53 APE8-dihe-in -59.46, 137.0 APE8-rot-in 298.24 APE67-dihe-in -65.46, -22.86 -48.78, -43.32 APE12-dist-in 13.0722 APE11-dist-in 11.3206 APE10-dist-in 6.6472 APE9-dist-in 3.3315 None None None AF2 -1.0 1.0 1.0 A 313.0 313.0 0 32 32 0 [[19, 315]] 1.0 AF-P50750-K1 CMGC_CDK9_HUMAN CMGC 3.3e-80 275.4 1.0 301.0 301.0 166 167 168 170 172 48 66 70 146 148 147 149.0 211 198 193 192 191 190 189 188 187 104 Cyclin-dependent kinase 9
CMGC CDK9 CDK9_HUMAN AF-P50750-K3A P50750 11 323 372.0 No_ligand No_ligand Active DFGin 7.0625 14.6978 BLAminus -139.94, 174.92 58.53, 50.7 -65.37, 20.59 281.14, 76.16 -63.5, -35.02 in-in in 8.8 Saltbr-in 2.7654 HRD-in -75.68, -48.0 63.0, 17.28 in-in-in SNCiii in-in ActLoopNT-in 2.8529 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -126.22, 172.67 APE9-dihe-na 61.33, 130.24 APE8-dihe-in -58.01, 135.54 APE8-rot-in 298.09 APE67-dihe-in -65.99, -22.34 -47.59, -46.0 APE12-dist-in 12.5857 APE11-dist-in 10.571 APE10-dist-in 6.2046 APE9-dist-in 3.3667 None None None AF2 -1.0 1.0 1.0 A 313.0 313.0 0 32 32 0 [[19, 315]] 1.0 AF-P50750-K3 CMGC_CDK9_HUMAN CMGC 3.3e-80 275.4 1.0 301.0 301.0 166 167 168 170 172 48 66 70 146 148 147 149.0 211 198 193 192 191 190 189 188 187 104 Cyclin-dependent kinase 9

PDB: AF-P50750 — CMGC CDK9_HUMAN

Total number of chains: 2
Active chains: 2
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% AF-P50750-K1A
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
CMGC CDK9 CDK9_HUMAN AF-P50750-K1A P50750 11 323 372.0 No_ligand No_ligand Active DFGin 6.8042 15.1653 BLAminus -137.37, 173.37 64.39, 60.59 -77.02, 16.85 288.83, 77.77 -62.06, -30.21 in-in in 8.5177 Saltbr-in 2.7095 HRD-in -74.93, -50.16 64.15, 10.46 in-in-in SNCiii in-in ActLoopNT-in 2.8146 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -118.96, 171.33 APE9-dihe-na 63.33, 135.53 APE8-dihe-in -59.46, 137.0 APE8-rot-in 298.24 APE67-dihe-in -65.46, -22.86 -48.78, -43.32 APE12-dist-in 13.0722 APE11-dist-in 11.3206 APE10-dist-in 6.6472 APE9-dist-in 3.3315 None None None AF2 -1.0 1.0 1.0 A 313.0 313.0 0 32 32 0 [[19, 315]] 1.0 AF-P50750-K1 Homo sapiens CMGC_CDK9_HUMAN CMGC 3.3e-80 275.4 1.0 301.0 301.0 166 167 168 170 172 48 66 70 146 148 147 149.0 211 198 193 192 191 190 189 188 187 104 Cyclin-dependent kinase 9
CMGC CDK9 CDK9_HUMAN AF-P50750-K3A P50750 11 323 372.0 No_ligand No_ligand Active DFGin 7.0625 14.6978 BLAminus -139.94, 174.92 58.53, 50.7 -65.37, 20.59 281.14, 76.16 -63.5, -35.02 in-in in 8.8 Saltbr-in 2.7654 HRD-in -75.68, -48.0 63.0, 17.28 in-in-in SNCiii in-in ActLoopNT-in 2.8529 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -126.22, 172.67 APE9-dihe-na 61.33, 130.24 APE8-dihe-in -58.01, 135.54 APE8-rot-in 298.09 APE67-dihe-in -65.99, -22.34 -47.59, -46.0 APE12-dist-in 12.5857 APE11-dist-in 10.571 APE10-dist-in 6.2046 APE9-dist-in 3.3667 None None None AF2 -1.0 1.0 1.0 A 313.0 313.0 0 32 32 0 [[19, 315]] 1.0 AF-P50750-K3 Homo sapiens CMGC_CDK9_HUMAN CMGC 3.3e-80 275.4 1.0 301.0 301.0 166 167 168 170 172 48 66 70 146 148 147 149.0 211 198 193 192 191 190 189 188 187 104 Cyclin-dependent kinase 9

PDB: AF-P50750 — CMGC CDK9_HUMAN

Total number of chains: 0
Active chains: 0
Total number of genes: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name