PDB: 9SKQ — 2 kinases

Total number of chains: 2
Active chains: 0
Total number of genes: 2
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% 9SKQA
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
CMGC CDK1 CDK1_HUMAN 9SKQA P06493 3 288 297.0 ANP:60301 ATPlike Inactive DFGin 7.1434 16.0323 BLAminus -125.06, -177.1 57.55, 62.82 -86.84, 50.52 271.32, 82.93 -98.1, -26.9 in-out in 9.7163 Saltbr-out 5.762 HRD-in -83.48, -58.42 64.77, 13.47 out-in-out SNCoio in-out ActLoopNT-in 2.6846 ActLoopCT-out nonTYR APEdihe_aaooo APEdist_iiii APE10-dihe-na -142.74, 165.15 APE9-dihe-na 69.23, -36.98 APE8-dihe-out 60.52, 63.14 APE8-rot-out 73.99 APE67-dihe-out 57.27, -80.66 61.32, -166.6 APE12-dist-in 12.7031 APE11-dist-in 10.0266 APE10-dist-in 7.0709 APE9-dist-in 3.7308 None TPO161 TPO161 EM 3.4 999.0 999.0 A 302.0 286.0 0 28 28 0 [[4, 287]] 1.0 9skq CMGC_CDK1_HUMAN CMGC 2.7e-87 298.9 1.0 301.0 301.0 145 146 147 149 151 33 51 55 125 127 126 128.0 186 173 168 167 166 165 164 163 162 81 Cyclin-dependent kinase 1
CMGC CDK7 CDK7_HUMAN 9SKQJ P50613 9 346 346.0 ANP:60401 ATPlike Inactive DFGin 7.0888 16.0793 BLAminus -134.4, -172.6 54.33, 63.76 -84.59, 21.04 273.82, 84.09 -68.06, -13.54 in-out in 8.6851 Saltbr-out 3.6038 HRD-in -66.63, -50.41 66.76, -1.97 out-in-out SNCoio in-out ActLoopNT-in 3.0208 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_iooi APE10-dihe-na -107.15, 155.19 APE9-dihe-na -64.85, 155.06 APE8-dihe-in -50.04, 149.57 APE8-rot-out 168.49 APE67-dihe-in -67.74, -34.69 -63.59, -17.75 APE12-dist-in 10.5875 APE11-dist-out 5.6701 APE10-dist-out 9.403 APE9-dist-in 3.9875 None None None EM 3.4 999.0 999.0 J 391.0 306.0 0 28 28 0 [[12, 295]] 1.0 9skq CMGC_CDK7_HUMAN CMGC 2.4e-78 271.1 1.0 301.0 301.0 154 155 156 158 160 41 62 66 134 136 135 137.0 195 182 177 176 175 174 173 172 171 92 Cyclin-dependent kinase 7

PDB: 9SKQ — 2 kinases

Total number of chains: 2
Active chains: 0
Total number of genes: 2
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% 9SKQA
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
CMGC CDK1 CDK1_HUMAN 9SKQA P06493 3 288 297.0 ANP:60301 ATPlike Inactive DFGin 7.1434 16.0323 BLAminus -125.06, -177.1 57.55, 62.82 -86.84, 50.52 271.32, 82.93 -98.1, -26.9 in-out in 9.7163 Saltbr-out 5.762 HRD-in -83.48, -58.42 64.77, 13.47 out-in-out SNCoio in-out ActLoopNT-in 2.6846 ActLoopCT-out nonTYR APEdihe_aaooo APEdist_iiii APE10-dihe-na -142.74, 165.15 APE9-dihe-na 69.23, -36.98 APE8-dihe-out 60.52, 63.14 APE8-rot-out 73.99 APE67-dihe-out 57.27, -80.66 61.32, -166.6 APE12-dist-in 12.7031 APE11-dist-in 10.0266 APE10-dist-in 7.0709 APE9-dist-in 3.7308 None TPO161 TPO161 EM 3.4 999.0 999.0 A 302.0 286.0 0 28 28 0 [[4, 287]] 1.0 9skq Homo sapiens CMGC_CDK1_HUMAN CMGC 2.7e-87 298.9 1.0 301.0 301.0 145 146 147 149 151 33 51 55 125 127 126 128.0 186 173 168 167 166 165 164 163 162 81 Cyclin-dependent kinase 1
CMGC CDK7 CDK7_HUMAN 9SKQJ P50613 9 346 346.0 ANP:60401 ATPlike Inactive DFGin 7.0888 16.0793 BLAminus -134.4, -172.6 54.33, 63.76 -84.59, 21.04 273.82, 84.09 -68.06, -13.54 in-out in 8.6851 Saltbr-out 3.6038 HRD-in -66.63, -50.41 66.76, -1.97 out-in-out SNCoio in-out ActLoopNT-in 3.0208 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_iooi APE10-dihe-na -107.15, 155.19 APE9-dihe-na -64.85, 155.06 APE8-dihe-in -50.04, 149.57 APE8-rot-out 168.49 APE67-dihe-in -67.74, -34.69 -63.59, -17.75 APE12-dist-in 10.5875 APE11-dist-out 5.6701 APE10-dist-out 9.403 APE9-dist-in 3.9875 None None None EM 3.4 999.0 999.0 J 391.0 306.0 0 28 28 0 [[12, 295]] 1.0 9skq Homo sapiens CMGC_CDK7_HUMAN CMGC 2.4e-78 271.1 1.0 301.0 301.0 154 155 156 158 160 41 62 66 134 136 135 137.0 195 182 177 176 175 174 173 172 171 92 Cyclin-dependent kinase 7

PDB: 9SKQ — 2 kinases

Total number of chains: 0
Active chains: 0
Total number of genes: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name