PDB: 8UYF — OTHER PINK1_PEDHC

Total number of chains: 0
Active chains: 0
Total number of genes: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name

PDB: 8UYF — OTHER PINK1_PEDHC

Total number of chains: 2
Active chains: 2
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% 8UYFA
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
OTHER PINK1 PINK1_PEDHC 8UYFA E0W1I1 120 574 575.0 No_ligand No_ligand Active DFGin 9.5133 14.9635 BLAminus -136.83, -168.72 58.18, 64.15 -87.9, 24.64 288.12, 82.88 -66.66, -19.24 in-in in 7.8155 Saltbr-in 3.419 HRD-in -69.55, -44.01 63.54, 4.69 in-in-in SNCiii in-in ActLoopNT-in 2.826 ActLoopCT-in nonTYR APEdihe_aaiai APEdist_iiii APE10-dihe-na 146.36, -141.86 APE9-dihe-na -108.86, -107.06 APE8-dihe-in -67.02, 141.26 APE8-rot-na 66.48 APE67-dihe-in -72.9, -43.17 -90.54, -7.39 APE12-dist-in 8.1033 APE11-dist-in 10.32 APE10-dist-in 5.8156 APE9-dist-in 3.7985 None TPO305 TPO305 EM 2.75 999.0 999.0 A 463.0 400.0 21 34 34 0 [[64, 514]] 1.0 8uyf Pediculus humanus OTHER_PINK1_PEDHC PINK1 1e-86 297.1 4.0 367.0 364.0 356 357 358 360 362 193 214 218 331 333 332 334.0 408 390 385 384 383 382 381 380 379 291 Serine/threonine-protein kinase Pink1, mitochondrial
OTHER PINK1 PINK1_PEDHC 8UYFB E0W1I1 120 574 575.0 No_ligand No_ligand Active DFGin 9.4882 15.1583 BLAminus -135.7, -170.08 58.94, 64.92 -85.96, 20.97 285.17, 83.72 -67.44, -17.23 in-in in 8.0028 Saltbr-in 2.8434 HRD-in -67.74, -43.05 64.81, -0.76 in-in-in SNCiii in-in ActLoopNT-in 3.0098 ActLoopCT-in nonTYR APEdihe_aaiai APEdist_iiii APE10-dihe-na 134.5, -151.17 APE9-dihe-na -108.73, -104.03 APE8-dihe-in -67.73, 144.41 APE8-rot-na 57.94 APE67-dihe-in -71.38, -41.15 -86.88, -12.19 APE12-dist-in 7.7294 APE11-dist-in 10.3177 APE10-dist-in 5.8794 APE9-dist-in 3.7853 None TPO305 TPO305 EM 2.75 999.0 999.0 B 463.0 401.0 21 34 34 0 [[64, 514]] 1.0 8uyf Pediculus humanus OTHER_PINK1_PEDHC PINK1 1e-86 297.1 4.0 367.0 364.0 356 357 358 360 362 193 214 218 331 333 332 334.0 408 390 385 384 383 382 381 380 379 291 Serine/threonine-protein kinase Pink1, mitochondrial

PDB: 8UYF — OTHER PINK1_PEDHC

Total number of chains: 2
Active chains: 2
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% 8UYFA
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
OTHER PINK1 PINK1_PEDHC 8UYFA E0W1I1 120 574 575.0 No_ligand No_ligand Active DFGin 9.5133 14.9635 BLAminus -136.83, -168.72 58.18, 64.15 -87.9, 24.64 288.12, 82.88 -66.66, -19.24 in-in in 7.8155 Saltbr-in 3.419 HRD-in -69.55, -44.01 63.54, 4.69 in-in-in SNCiii in-in ActLoopNT-in 2.826 ActLoopCT-in nonTYR APEdihe_aaiai APEdist_iiii APE10-dihe-na 146.36, -141.86 APE9-dihe-na -108.86, -107.06 APE8-dihe-in -67.02, 141.26 APE8-rot-na 66.48 APE67-dihe-in -72.9, -43.17 -90.54, -7.39 APE12-dist-in 8.1033 APE11-dist-in 10.32 APE10-dist-in 5.8156 APE9-dist-in 3.7985 None TPO305 TPO305 EM 2.75 999.0 999.0 A 463.0 400.0 21 34 34 0 [[64, 514]] 1.0 8uyf Pediculus humanus OTHER_PINK1_PEDHC PINK1 1e-86 297.1 4.0 367.0 364.0 356 357 358 360 362 193 214 218 331 333 332 334.0 408 390 385 384 383 382 381 380 379 291 Serine/threonine-protein kinase Pink1, mitochondrial
OTHER PINK1 PINK1_PEDHC 8UYFB E0W1I1 120 574 575.0 No_ligand No_ligand Active DFGin 9.4882 15.1583 BLAminus -135.7, -170.08 58.94, 64.92 -85.96, 20.97 285.17, 83.72 -67.44, -17.23 in-in in 8.0028 Saltbr-in 2.8434 HRD-in -67.74, -43.05 64.81, -0.76 in-in-in SNCiii in-in ActLoopNT-in 3.0098 ActLoopCT-in nonTYR APEdihe_aaiai APEdist_iiii APE10-dihe-na 134.5, -151.17 APE9-dihe-na -108.73, -104.03 APE8-dihe-in -67.73, 144.41 APE8-rot-na 57.94 APE67-dihe-in -71.38, -41.15 -86.88, -12.19 APE12-dist-in 7.7294 APE11-dist-in 10.3177 APE10-dist-in 5.8794 APE9-dist-in 3.7853 None TPO305 TPO305 EM 2.75 999.0 999.0 B 463.0 401.0 21 34 34 0 [[64, 514]] 1.0 8uyf Pediculus humanus OTHER_PINK1_PEDHC PINK1 1e-86 297.1 4.0 367.0 364.0 356 357 358 360 362 193 214 218 331 333 332 334.0 408 390 385 384 383 382 381 380 379 291 Serine/threonine-protein kinase Pink1, mitochondrial