PDB: 5VCW — OTHER PMYT1_HUMAN

Total number of chains: 2
Active chains: 0
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% 5VCWA
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
OTHER PKMYT1 PMYT1_HUMAN 5VCWA Q99640 77 361 499.0 93J:401 Type1 Inactive DFGin 5.7526 14.4031 BLAminus -140.89, -170.02 65.17, 65.71 -80.17, 44.69 310.3, 111.94 -72.85, -37.75 in-in in 8.6737 Saltbr-in 2.6917 HRD-in -65.93, -47.94 69.86, -0.01 in-in-out SNCiio in-out ActLoopNT-in 2.8954 ActLoopCT-out nonTYR APEdihe_aaiai APEdist_iooi APE10-dihe-na -70.16, 136.95 APE9-dihe-na -95.11, -179.89 APE8-dihe-in -74.56, 119.43 APE8-rot-na 190.69 APE67-dihe-in -62.5, -29.66 -60.78, -22.9 APE12-dist-in 7.6361 APE11-dist-out 5.4012 APE10-dist-out 9.2335 APE9-dist-in 4.5138 None None None XRAY 2.25 0.196 0.246 A 311.0 285.0 0 27 27 0 [[110, 359]] 1.0 5vcw OTHER_PKMYT1_HUMAN STE 9.9e-39 139.4 1.0 255.0 255.0 250 251 252 254 256 139 157 161 230 232 231 233.0 288 277 272 271 270 269 268 267 266 188 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase
OTHER PKMYT1 PMYT1_HUMAN 5VCWB Q99640 77 361 499.0 93J:401 Type1 Inactive DFGin 6.1739 14.7528 BLAminus -145.87, -171.97 60.37, 74.58 -84.49, 28.86 300.8, 108.65 -60.24, -45.91 in-out in 8.9912 Saltbr-out 3.7956 HRD-in -67.52, -46.64 69.7, -6.0 out-in-out SNCoio in-out ActLoopNT-in 2.9046 ActLoopCT-out nonTYR APEdihe_aaiai APEdist_iooi APE10-dihe-na -83.37, 139.87 APE9-dihe-na -94.4, -171.94 APE8-dihe-in -64.72, 123.4 APE8-rot-na 193.82 APE67-dihe-in -58.05, -32.99 -66.08, -23.26 APE12-dist-in 8.1222 APE11-dist-out 5.4977 APE10-dist-out 9.2248 APE9-dist-in 4.3755 None None None XRAY 2.25 0.196 0.246 B 311.0 285.0 0 27 27 0 [[110, 359]] 1.0 5vcw OTHER_PKMYT1_HUMAN STE 9.9e-39 139.4 1.0 255.0 255.0 250 251 252 254 256 139 157 161 230 232 231 233.0 288 277 272 271 270 269 268 267 266 188 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase

PDB: 5VCW — OTHER PMYT1_HUMAN

Total number of chains: 2
Active chains: 0
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% 5VCWA
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
OTHER PKMYT1 PMYT1_HUMAN 5VCWA Q99640 77 361 499.0 93J:401 Type1 Inactive DFGin 5.7526 14.4031 BLAminus -140.89, -170.02 65.17, 65.71 -80.17, 44.69 310.3, 111.94 -72.85, -37.75 in-in in 8.6737 Saltbr-in 2.6917 HRD-in -65.93, -47.94 69.86, -0.01 in-in-out SNCiio in-out ActLoopNT-in 2.8954 ActLoopCT-out nonTYR APEdihe_aaiai APEdist_iooi APE10-dihe-na -70.16, 136.95 APE9-dihe-na -95.11, -179.89 APE8-dihe-in -74.56, 119.43 APE8-rot-na 190.69 APE67-dihe-in -62.5, -29.66 -60.78, -22.9 APE12-dist-in 7.6361 APE11-dist-out 5.4012 APE10-dist-out 9.2335 APE9-dist-in 4.5138 None None None XRAY 2.25 0.196 0.246 A 311.0 285.0 0 27 27 0 [[110, 359]] 1.0 5vcw Homo sapiens OTHER_PKMYT1_HUMAN STE 9.9e-39 139.4 1.0 255.0 255.0 250 251 252 254 256 139 157 161 230 232 231 233.0 288 277 272 271 270 269 268 267 266 188 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase
OTHER PKMYT1 PMYT1_HUMAN 5VCWB Q99640 77 361 499.0 93J:401 Type1 Inactive DFGin 6.1739 14.7528 BLAminus -145.87, -171.97 60.37, 74.58 -84.49, 28.86 300.8, 108.65 -60.24, -45.91 in-out in 8.9912 Saltbr-out 3.7956 HRD-in -67.52, -46.64 69.7, -6.0 out-in-out SNCoio in-out ActLoopNT-in 2.9046 ActLoopCT-out nonTYR APEdihe_aaiai APEdist_iooi APE10-dihe-na -83.37, 139.87 APE9-dihe-na -94.4, -171.94 APE8-dihe-in -64.72, 123.4 APE8-rot-na 193.82 APE67-dihe-in -58.05, -32.99 -66.08, -23.26 APE12-dist-in 8.1222 APE11-dist-out 5.4977 APE10-dist-out 9.2248 APE9-dist-in 4.3755 None None None XRAY 2.25 0.196 0.246 B 311.0 285.0 0 27 27 0 [[110, 359]] 1.0 5vcw Homo sapiens OTHER_PKMYT1_HUMAN STE 9.9e-39 139.4 1.0 255.0 255.0 250 251 252 254 256 139 157 161 230 232 231 233.0 288 277 272 271 270 269 268 267 266 188 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase

PDB: 5VCW — OTHER PMYT1_HUMAN

Total number of chains: 0
Active chains: 0
Total number of genes: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name