PDB: 5UKF — CK1 VRK1_HUMAN

Total number of chains: 4
Active chains: 0
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 4 100.0% 5UKFA
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
CK1 VRK1 VRK1_HUMAN 5UKFA Q99986 20 341 396.0 8E1:401 Type1 Inactive DFGin 7.8592 14.4247 BLAminus -119.38, 173.41 75.63, 89.68 -116.06, 14.39 298.31, 90.17 -54.65, -38.06 in-out in 8.2442 Saltbr-out 3.6777 HRD-in -79.04, -57.54 80.31, -4.23 out-in-out SNCoio in-out ActLoopNT-in 2.8306 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_iooi APE10-dihe-na -63.69, -39.06 APE9-dihe-na 83.51, -147.55 APE8-dihe-in -109.2, 120.2 APE8-rot-in 298.23 APE67-dihe-in -64.41, -31.89 -42.31, -49.41 APE12-dist-in 9.5105 APE11-dist-out 5.8405 APE10-dist-out 9.8094 APE9-dist-in 3.8914 K34A,K35A,E36A,E212A,K214A,E215A,E292A,K293A,K295A,K359A,K360A None None XRAY 2.4 0.179 0.214 A 363.0 322.0 0 35 35 0 [[37, 326]] 1.0 5ukf CK1_VRK1_HUMAN CK1 8.3e-105 355.8 1.0 261.0 261.0 196 197 198 200 202 71 83 87 174 176 175 177.0 243 231 226 225 224 223 222 221 220 132 Serine/threonine-protein kinase VRK1
CK1 VRK1 VRK1_HUMAN 5UKFB Q99986 51 341 396.0 8E1:401 Type1 Inactive DFGin 8.0971 14.664 BLAminus -121.11, 172.72 70.19, 89.58 -108.13, 26.3 294.0, 86.12 -70.32, -38.73 in-none in 8.303 Saltbr-none 999.0 HRD-in -78.71, -64.95 86.46, -3.2 none-in-out SNCnio in-out ActLoopNT-in 2.9123 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_oiii APE10-dihe-na -75.53, 157.07 APE9-dihe-na 91.4, -169.09 APE8-dihe-in -84.62, 126.19 APE8-rot-in 289.52 APE67-dihe-in -64.84, -37.67 -57.81, -40.1 APE12-dist-out 14.8375 APE11-dist-in 13.5228 APE10-dist-in 7.8421 APE9-dist-in 4.275 K34A,K35A,E36A,E212A,K214A,E215A,E292A,K293A,K295A,K359A,K360A None None XRAY 2.4 0.179 0.214 B 363.0 265.0 40 35 35 0 [[37, 326]] 1.0 5ukf CK1_VRK1_HUMAN CK1 8.3e-105 355.8 1.0 261.0 261.0 196 197 198 200 202 71 83 87 174 176 175 177.0 243 231 226 225 224 223 222 221 220 132 Serine/threonine-protein kinase VRK1
CK1 VRK1 VRK1_HUMAN 5UKFC Q99986 21 341 396.0 8E1:401 Type1 Inactive DFGin 7.9073 15.0551 BLAminus -114.51, 177.87 73.15, 91.67 -116.1, 13.64 296.69, 91.23 -56.4, -31.52 in-none in 8.6355 Saltbr-none 999.0 HRD-in -84.93, -54.46 77.79, -1.55 none-in-out SNCnio in-out ActLoopNT-in 2.855 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_iooi APE10-dihe-na -63.77, -41.33 APE9-dihe-na 83.79, -153.92 APE8-dihe-in -103.66, 122.47 APE8-rot-in 295.8 APE67-dihe-in -65.42, -25.93 -48.36, -48.26 APE12-dist-in 9.325 APE11-dist-out 5.9311 APE10-dist-out 9.8748 APE9-dist-in 4.0352 K34A,K35A,E36A,E212A,K214A,E215A,E292A,K293A,K295A,K359A,K360A None None XRAY 2.4 0.179 0.214 C 363.0 317.0 4 35 35 0 [[37, 326]] 1.0 5ukf CK1_VRK1_HUMAN CK1 8.3e-105 355.8 1.0 261.0 261.0 196 197 198 200 202 71 83 87 174 176 175 177.0 243 231 226 225 224 223 222 221 220 132 Serine/threonine-protein kinase VRK1
CK1 VRK1 VRK1_HUMAN 5UKFD Q99986 39 341 396.0 8E1:402 Type1 Inactive DFGin 7.8547 14.6621 BLAminus -113.78, 177.54 70.67, 89.75 -108.82, 24.37 295.86, 87.15 -64.56, -29.83 in-in in 9.7787 Saltbr-in 2.7009 HRD-in -84.79, -51.24 76.1, -0.34 in-in-out SNCiio in-out ActLoopNT-in 2.9789 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_oiii APE10-dihe-na -75.62, 154.64 APE9-dihe-na 93.28, -169.83 APE8-dihe-in -86.2, 117.34 APE8-rot-in 297.37 APE67-dihe-in -69.56, -25.24 -47.9, -42.95 APE12-dist-out 14.9756 APE11-dist-in 13.6211 APE10-dist-in 7.9243 APE9-dist-in 4.2687 K34A,K35A,E36A,E212A,K214A,E215A,E292A,K293A,K295A,K359A,K360A None None XRAY 2.4 0.179 0.214 D 363.0 268.0 37 35 35 0 [[37, 326]] 1.0 5ukf CK1_VRK1_HUMAN CK1 8.3e-105 355.8 1.0 261.0 261.0 196 197 198 200 202 71 83 87 174 176 175 177.0 243 231 226 225 224 223 222 221 220 132 Serine/threonine-protein kinase VRK1

PDB: 5UKF — CK1 VRK1_HUMAN

Total number of chains: 4
Active chains: 0
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 4 100.0% 5UKFA
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
CK1 VRK1 VRK1_HUMAN 5UKFA Q99986 20 341 396.0 8E1:401 Type1 Inactive DFGin 7.8592 14.4247 BLAminus -119.38, 173.41 75.63, 89.68 -116.06, 14.39 298.31, 90.17 -54.65, -38.06 in-out in 8.2442 Saltbr-out 3.6777 HRD-in -79.04, -57.54 80.31, -4.23 out-in-out SNCoio in-out ActLoopNT-in 2.8306 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_iooi APE10-dihe-na -63.69, -39.06 APE9-dihe-na 83.51, -147.55 APE8-dihe-in -109.2, 120.2 APE8-rot-in 298.23 APE67-dihe-in -64.41, -31.89 -42.31, -49.41 APE12-dist-in 9.5105 APE11-dist-out 5.8405 APE10-dist-out 9.8094 APE9-dist-in 3.8914 K34A,K35A,E36A,E212A,K214A,E215A,E292A,K293A,K295A,K359A,K360A None None XRAY 2.4 0.179 0.214 A 363.0 322.0 0 35 35 0 [[37, 326]] 1.0 5ukf Homo sapiens CK1_VRK1_HUMAN CK1 8.3e-105 355.8 1.0 261.0 261.0 196 197 198 200 202 71 83 87 174 176 175 177.0 243 231 226 225 224 223 222 221 220 132 Serine/threonine-protein kinase VRK1
CK1 VRK1 VRK1_HUMAN 5UKFB Q99986 51 341 396.0 8E1:401 Type1 Inactive DFGin 8.0971 14.664 BLAminus -121.11, 172.72 70.19, 89.58 -108.13, 26.3 294.0, 86.12 -70.32, -38.73 in-none in 8.303 Saltbr-none 999.0 HRD-in -78.71, -64.95 86.46, -3.2 none-in-out SNCnio in-out ActLoopNT-in 2.9123 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_oiii APE10-dihe-na -75.53, 157.07 APE9-dihe-na 91.4, -169.09 APE8-dihe-in -84.62, 126.19 APE8-rot-in 289.52 APE67-dihe-in -64.84, -37.67 -57.81, -40.1 APE12-dist-out 14.8375 APE11-dist-in 13.5228 APE10-dist-in 7.8421 APE9-dist-in 4.275 K34A,K35A,E36A,E212A,K214A,E215A,E292A,K293A,K295A,K359A,K360A None None XRAY 2.4 0.179 0.214 B 363.0 265.0 40 35 35 0 [[37, 326]] 1.0 5ukf Homo sapiens CK1_VRK1_HUMAN CK1 8.3e-105 355.8 1.0 261.0 261.0 196 197 198 200 202 71 83 87 174 176 175 177.0 243 231 226 225 224 223 222 221 220 132 Serine/threonine-protein kinase VRK1
CK1 VRK1 VRK1_HUMAN 5UKFC Q99986 21 341 396.0 8E1:401 Type1 Inactive DFGin 7.9073 15.0551 BLAminus -114.51, 177.87 73.15, 91.67 -116.1, 13.64 296.69, 91.23 -56.4, -31.52 in-none in 8.6355 Saltbr-none 999.0 HRD-in -84.93, -54.46 77.79, -1.55 none-in-out SNCnio in-out ActLoopNT-in 2.855 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_iooi APE10-dihe-na -63.77, -41.33 APE9-dihe-na 83.79, -153.92 APE8-dihe-in -103.66, 122.47 APE8-rot-in 295.8 APE67-dihe-in -65.42, -25.93 -48.36, -48.26 APE12-dist-in 9.325 APE11-dist-out 5.9311 APE10-dist-out 9.8748 APE9-dist-in 4.0352 K34A,K35A,E36A,E212A,K214A,E215A,E292A,K293A,K295A,K359A,K360A None None XRAY 2.4 0.179 0.214 C 363.0 317.0 4 35 35 0 [[37, 326]] 1.0 5ukf Homo sapiens CK1_VRK1_HUMAN CK1 8.3e-105 355.8 1.0 261.0 261.0 196 197 198 200 202 71 83 87 174 176 175 177.0 243 231 226 225 224 223 222 221 220 132 Serine/threonine-protein kinase VRK1
CK1 VRK1 VRK1_HUMAN 5UKFD Q99986 39 341 396.0 8E1:402 Type1 Inactive DFGin 7.8547 14.6621 BLAminus -113.78, 177.54 70.67, 89.75 -108.82, 24.37 295.86, 87.15 -64.56, -29.83 in-in in 9.7787 Saltbr-in 2.7009 HRD-in -84.79, -51.24 76.1, -0.34 in-in-out SNCiio in-out ActLoopNT-in 2.9789 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_oiii APE10-dihe-na -75.62, 154.64 APE9-dihe-na 93.28, -169.83 APE8-dihe-in -86.2, 117.34 APE8-rot-in 297.37 APE67-dihe-in -69.56, -25.24 -47.9, -42.95 APE12-dist-out 14.9756 APE11-dist-in 13.6211 APE10-dist-in 7.9243 APE9-dist-in 4.2687 K34A,K35A,E36A,E212A,K214A,E215A,E292A,K293A,K295A,K359A,K360A None None XRAY 2.4 0.179 0.214 D 363.0 268.0 37 35 35 0 [[37, 326]] 1.0 5ukf Homo sapiens CK1_VRK1_HUMAN CK1 8.3e-105 355.8 1.0 261.0 261.0 196 197 198 200 202 71 83 87 174 176 175 177.0 243 231 226 225 224 223 222 221 220 132 Serine/threonine-protein kinase VRK1

PDB: 5UKF — CK1 VRK1_HUMAN

Total number of chains: 0
Active chains: 0
Total number of genes: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name