PDB: 5OAT — OTHER PINK1_TRICA

Total number of chains: 0
Active chains: 0
Total number of genes: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name

PDB: 5OAT — OTHER PINK1_TRICA

Total number of chains: 6
Active chains: 0
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 6 100.0% 5OATA
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
OTHER PINK1 PINK1_TRICA 5OATA D6WMX4 156 566 570.0 No_ligand No_ligand Inactive DFGin 9.4365 15.8063 BLAminus -147.52, 177.72 61.34, 73.14 -82.57, 14.89 283.86, 68.8 -55.56, -21.05 in-in in 7.8014 Saltbr-in 2.5478 HRD-in -64.27, -48.55 73.73, -4.47 in-in-out SNCiio in-out ActLoopNT-in 2.8629 ActLoopCT-out nonTYR APEdihe_aaoao APEdist_iiii APE10-dihe-na 99.27, -166.58 APE9-dihe-na -62.24, 114.46 APE8-dihe-out -69.27, 49.09 APE8-rot-na 258.65 APE67-dihe-out -50.85, -37.03 -122.53, 173.84 APE12-dist-in 7.8536 APE11-dist-in 9.7675 APE10-dist-in 5.175 APE9-dist-in 4.2448 None SEP207 SEP207 XRAY 2.78 0.207 0.246 A 411.0 360.0 20 34 34 0 [[61, 504]] 1.0 5oat Tribolium castaneum OTHER_PINK1_TRICA PINK1 2.6e-85 292.5 5.0 367.0 363.0 358 359 360 362 364 196 217 221 334 336 335 337.0 410 392 387 386 385 384 383 382 381 295 Serine/threonine-protein kinase Pink1, mitochondrial
OTHER PINK1 PINK1_TRICA 5OATB D6WMX4 156 566 570.0 No_ligand No_ligand Inactive DFGin 9.4426 15.7772 BLAminus -135.47, 172.84 65.92, 74.75 -85.55, 15.7 280.95, 74.43 -56.17, -26.04 in-in in 7.9041 Saltbr-in 2.4673 HRD-in -66.09, -54.06 79.06, -4.27 in-in-out SNCiio in-out ActLoopNT-in 2.7622 ActLoopCT-out nonTYR APEdihe_aaiao APEdist_iiii APE10-dihe-na 99.78, -168.21 APE9-dihe-na -54.75, 112.99 APE8-dihe-in -70.42, 51.69 APE8-rot-na 257.97 APE67-dihe-out -57.18, -35.52 -119.72, -179.14 APE12-dist-in 7.9315 APE11-dist-in 9.7057 APE10-dist-in 5.0499 APE9-dist-in 4.317 None SEP207 SEP207 XRAY 2.78 0.207 0.246 B 411.0 360.0 20 34 34 0 [[61, 504]] 1.0 5oat Tribolium castaneum OTHER_PINK1_TRICA PINK1 2.6e-85 292.5 5.0 367.0 363.0 358 359 360 362 364 196 217 221 334 336 335 337.0 410 392 387 386 385 384 383 382 381 295 Serine/threonine-protein kinase Pink1, mitochondrial
OTHER PINK1 PINK1_TRICA 5OATC D6WMX4 156 566 570.0 No_ligand No_ligand Inactive DFGin 9.4288 15.849 BLAminus -137.82, 169.6 65.29, 75.61 -85.9, 19.59 284.32, 71.83 -61.92, -16.8 in-in in 7.8024 Saltbr-in 2.5336 HRD-in -68.2, -48.01 70.4, 2.78 in-in-out SNCiio in-out ActLoopNT-in 2.8473 ActLoopCT-out nonTYR APEdihe_aaiao APEdist_iiii APE10-dihe-na 98.06, -166.05 APE9-dihe-na -58.93, 113.39 APE8-dihe-in -72.16, 58.66 APE8-rot-na 259.99 APE67-dihe-out -56.31, -38.6 -127.09, 179.67 APE12-dist-in 7.8798 APE11-dist-in 9.6611 APE10-dist-in 5.008 APE9-dist-in 4.0776 None SEP207 SEP207 XRAY 2.78 0.207 0.246 C 411.0 360.0 20 34 34 0 [[61, 504]] 1.0 5oat Tribolium castaneum OTHER_PINK1_TRICA PINK1 2.6e-85 292.5 5.0 367.0 363.0 358 359 360 362 364 196 217 221 334 336 335 337.0 410 392 387 386 385 384 383 382 381 295 Serine/threonine-protein kinase Pink1, mitochondrial
OTHER PINK1 PINK1_TRICA 5OATD D6WMX4 156 566 570.0 No_ligand No_ligand Inactive DFGin 9.4574 15.7631 BLAminus -136.35, 175.57 64.08, 74.06 -85.6, 13.95 282.98, 74.66 -50.59, -27.79 in-in in 7.803 Saltbr-in 2.5642 HRD-in -64.41, -47.66 68.81, -2.28 in-in-out SNCiio in-out ActLoopNT-in 2.8485 ActLoopCT-out nonTYR APEdihe_aaiao APEdist_iiii APE10-dihe-na 98.5, -167.12 APE9-dihe-na -60.27, 110.73 APE8-dihe-in -66.67, 50.22 APE8-rot-na 260.63 APE67-dihe-out -57.59, -36.67 -119.03, -179.29 APE12-dist-in 7.8785 APE11-dist-in 9.7809 APE10-dist-in 5.1644 APE9-dist-in 4.1882 None SEP207 SEP207 XRAY 2.78 0.207 0.246 D 411.0 360.0 20 34 34 0 [[61, 504]] 1.0 5oat Tribolium castaneum OTHER_PINK1_TRICA PINK1 2.6e-85 292.5 5.0 367.0 363.0 358 359 360 362 364 196 217 221 334 336 335 337.0 410 392 387 386 385 384 383 382 381 295 Serine/threonine-protein kinase Pink1, mitochondrial
OTHER PINK1 PINK1_TRICA 5OATE D6WMX4 156 566 570.0 No_ligand No_ligand Inactive DFGin 9.5807 15.8049 BLAminus -135.22, 177.59 63.48, 72.2 -85.67, 17.21 282.67, 72.11 -57.95, -19.73 in-in in 7.8491 Saltbr-in 2.4382 HRD-in -66.25, -48.03 72.48, 1.48 in-in-out SNCiio in-out ActLoopNT-in 2.9447 ActLoopCT-out nonTYR APEdihe_aaiao APEdist_iiii APE10-dihe-na 100.18, -165.73 APE9-dihe-na -60.0, 113.43 APE8-dihe-in -69.58, 53.7 APE8-rot-na 258.36 APE67-dihe-out -59.29, -35.21 -123.49, -179.61 APE12-dist-in 7.8863 APE11-dist-in 9.7306 APE10-dist-in 5.1066 APE9-dist-in 4.0974 None SEP207 SEP207 XRAY 2.78 0.207 0.246 E 411.0 360.0 20 34 34 0 [[61, 504]] 1.0 5oat Tribolium castaneum OTHER_PINK1_TRICA PINK1 2.6e-85 292.5 5.0 367.0 363.0 358 359 360 362 364 196 217 221 334 336 335 337.0 410 392 387 386 385 384 383 382 381 295 Serine/threonine-protein kinase Pink1, mitochondrial
OTHER PINK1 PINK1_TRICA 5OATF D6WMX4 156 566 570.0 No_ligand No_ligand Inactive DFGin 9.4362 15.9096 BLAminus -130.66, 170.78 63.73, 78.32 -85.51, 12.95 282.63, 71.22 -58.25, -13.78 in-in in 7.8938 Saltbr-in 2.576 HRD-in -70.88, -44.01 66.8, 2.85 in-in-out SNCiio in-out ActLoopNT-in 2.8197 ActLoopCT-out nonTYR APEdihe_aaiao APEdist_iiii APE10-dihe-na 103.67, -172.96 APE9-dihe-na -49.83, 115.89 APE8-dihe-in -71.94, 53.26 APE8-rot-na 259.47 APE67-dihe-out -54.67, -37.52 -122.72, -178.72 APE12-dist-in 7.886 APE11-dist-in 9.6987 APE10-dist-in 5.0966 APE9-dist-in 4.1076 None SEP207 SEP207 XRAY 2.78 0.207 0.246 F 411.0 360.0 20 34 34 0 [[61, 504]] 1.0 5oat Tribolium castaneum OTHER_PINK1_TRICA PINK1 2.6e-85 292.5 5.0 367.0 363.0 358 359 360 362 364 196 217 221 334 336 335 337.0 410 392 387 386 385 384 383 382 381 295 Serine/threonine-protein kinase Pink1, mitochondrial

PDB: 5OAT — OTHER PINK1_TRICA

Total number of chains: 6
Active chains: 0
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 6 100.0% 5OATA
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
OTHER PINK1 PINK1_TRICA 5OATA D6WMX4 156 566 570.0 No_ligand No_ligand Inactive DFGin 9.4365 15.8063 BLAminus -147.52, 177.72 61.34, 73.14 -82.57, 14.89 283.86, 68.8 -55.56, -21.05 in-in in 7.8014 Saltbr-in 2.5478 HRD-in -64.27, -48.55 73.73, -4.47 in-in-out SNCiio in-out ActLoopNT-in 2.8629 ActLoopCT-out nonTYR APEdihe_aaoao APEdist_iiii APE10-dihe-na 99.27, -166.58 APE9-dihe-na -62.24, 114.46 APE8-dihe-out -69.27, 49.09 APE8-rot-na 258.65 APE67-dihe-out -50.85, -37.03 -122.53, 173.84 APE12-dist-in 7.8536 APE11-dist-in 9.7675 APE10-dist-in 5.175 APE9-dist-in 4.2448 None SEP207 SEP207 XRAY 2.78 0.207 0.246 A 411.0 360.0 20 34 34 0 [[61, 504]] 1.0 5oat Tribolium castaneum OTHER_PINK1_TRICA PINK1 2.6e-85 292.5 5.0 367.0 363.0 358 359 360 362 364 196 217 221 334 336 335 337.0 410 392 387 386 385 384 383 382 381 295 Serine/threonine-protein kinase Pink1, mitochondrial
OTHER PINK1 PINK1_TRICA 5OATB D6WMX4 156 566 570.0 No_ligand No_ligand Inactive DFGin 9.4426 15.7772 BLAminus -135.47, 172.84 65.92, 74.75 -85.55, 15.7 280.95, 74.43 -56.17, -26.04 in-in in 7.9041 Saltbr-in 2.4673 HRD-in -66.09, -54.06 79.06, -4.27 in-in-out SNCiio in-out ActLoopNT-in 2.7622 ActLoopCT-out nonTYR APEdihe_aaiao APEdist_iiii APE10-dihe-na 99.78, -168.21 APE9-dihe-na -54.75, 112.99 APE8-dihe-in -70.42, 51.69 APE8-rot-na 257.97 APE67-dihe-out -57.18, -35.52 -119.72, -179.14 APE12-dist-in 7.9315 APE11-dist-in 9.7057 APE10-dist-in 5.0499 APE9-dist-in 4.317 None SEP207 SEP207 XRAY 2.78 0.207 0.246 B 411.0 360.0 20 34 34 0 [[61, 504]] 1.0 5oat Tribolium castaneum OTHER_PINK1_TRICA PINK1 2.6e-85 292.5 5.0 367.0 363.0 358 359 360 362 364 196 217 221 334 336 335 337.0 410 392 387 386 385 384 383 382 381 295 Serine/threonine-protein kinase Pink1, mitochondrial
OTHER PINK1 PINK1_TRICA 5OATC D6WMX4 156 566 570.0 No_ligand No_ligand Inactive DFGin 9.4288 15.849 BLAminus -137.82, 169.6 65.29, 75.61 -85.9, 19.59 284.32, 71.83 -61.92, -16.8 in-in in 7.8024 Saltbr-in 2.5336 HRD-in -68.2, -48.01 70.4, 2.78 in-in-out SNCiio in-out ActLoopNT-in 2.8473 ActLoopCT-out nonTYR APEdihe_aaiao APEdist_iiii APE10-dihe-na 98.06, -166.05 APE9-dihe-na -58.93, 113.39 APE8-dihe-in -72.16, 58.66 APE8-rot-na 259.99 APE67-dihe-out -56.31, -38.6 -127.09, 179.67 APE12-dist-in 7.8798 APE11-dist-in 9.6611 APE10-dist-in 5.008 APE9-dist-in 4.0776 None SEP207 SEP207 XRAY 2.78 0.207 0.246 C 411.0 360.0 20 34 34 0 [[61, 504]] 1.0 5oat Tribolium castaneum OTHER_PINK1_TRICA PINK1 2.6e-85 292.5 5.0 367.0 363.0 358 359 360 362 364 196 217 221 334 336 335 337.0 410 392 387 386 385 384 383 382 381 295 Serine/threonine-protein kinase Pink1, mitochondrial
OTHER PINK1 PINK1_TRICA 5OATD D6WMX4 156 566 570.0 No_ligand No_ligand Inactive DFGin 9.4574 15.7631 BLAminus -136.35, 175.57 64.08, 74.06 -85.6, 13.95 282.98, 74.66 -50.59, -27.79 in-in in 7.803 Saltbr-in 2.5642 HRD-in -64.41, -47.66 68.81, -2.28 in-in-out SNCiio in-out ActLoopNT-in 2.8485 ActLoopCT-out nonTYR APEdihe_aaiao APEdist_iiii APE10-dihe-na 98.5, -167.12 APE9-dihe-na -60.27, 110.73 APE8-dihe-in -66.67, 50.22 APE8-rot-na 260.63 APE67-dihe-out -57.59, -36.67 -119.03, -179.29 APE12-dist-in 7.8785 APE11-dist-in 9.7809 APE10-dist-in 5.1644 APE9-dist-in 4.1882 None SEP207 SEP207 XRAY 2.78 0.207 0.246 D 411.0 360.0 20 34 34 0 [[61, 504]] 1.0 5oat Tribolium castaneum OTHER_PINK1_TRICA PINK1 2.6e-85 292.5 5.0 367.0 363.0 358 359 360 362 364 196 217 221 334 336 335 337.0 410 392 387 386 385 384 383 382 381 295 Serine/threonine-protein kinase Pink1, mitochondrial
OTHER PINK1 PINK1_TRICA 5OATE D6WMX4 156 566 570.0 No_ligand No_ligand Inactive DFGin 9.5807 15.8049 BLAminus -135.22, 177.59 63.48, 72.2 -85.67, 17.21 282.67, 72.11 -57.95, -19.73 in-in in 7.8491 Saltbr-in 2.4382 HRD-in -66.25, -48.03 72.48, 1.48 in-in-out SNCiio in-out ActLoopNT-in 2.9447 ActLoopCT-out nonTYR APEdihe_aaiao APEdist_iiii APE10-dihe-na 100.18, -165.73 APE9-dihe-na -60.0, 113.43 APE8-dihe-in -69.58, 53.7 APE8-rot-na 258.36 APE67-dihe-out -59.29, -35.21 -123.49, -179.61 APE12-dist-in 7.8863 APE11-dist-in 9.7306 APE10-dist-in 5.1066 APE9-dist-in 4.0974 None SEP207 SEP207 XRAY 2.78 0.207 0.246 E 411.0 360.0 20 34 34 0 [[61, 504]] 1.0 5oat Tribolium castaneum OTHER_PINK1_TRICA PINK1 2.6e-85 292.5 5.0 367.0 363.0 358 359 360 362 364 196 217 221 334 336 335 337.0 410 392 387 386 385 384 383 382 381 295 Serine/threonine-protein kinase Pink1, mitochondrial
OTHER PINK1 PINK1_TRICA 5OATF D6WMX4 156 566 570.0 No_ligand No_ligand Inactive DFGin 9.4362 15.9096 BLAminus -130.66, 170.78 63.73, 78.32 -85.51, 12.95 282.63, 71.22 -58.25, -13.78 in-in in 7.8938 Saltbr-in 2.576 HRD-in -70.88, -44.01 66.8, 2.85 in-in-out SNCiio in-out ActLoopNT-in 2.8197 ActLoopCT-out nonTYR APEdihe_aaiao APEdist_iiii APE10-dihe-na 103.67, -172.96 APE9-dihe-na -49.83, 115.89 APE8-dihe-in -71.94, 53.26 APE8-rot-na 259.47 APE67-dihe-out -54.67, -37.52 -122.72, -178.72 APE12-dist-in 7.886 APE11-dist-in 9.6987 APE10-dist-in 5.0966 APE9-dist-in 4.1076 None SEP207 SEP207 XRAY 2.78 0.207 0.246 F 411.0 360.0 20 34 34 0 [[61, 504]] 1.0 5oat Tribolium castaneum OTHER_PINK1_TRICA PINK1 2.6e-85 292.5 5.0 367.0 363.0 358 359 360 362 364 196 217 221 334 336 335 337.0 410 392 387 386 385 384 383 382 381 295 Serine/threonine-protein kinase Pink1, mitochondrial