PDB: 2V62 — CK1 VRK2_HUMAN

Total number of chains: 2
Active chains: 2
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% 2V62B
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
CK1 VRK2 VRK2_HUMAN 2V62A Q86Y07 15 330 508.0 No_ligand No_ligand Active DFGin 7.5216 14.2783 BLAminus -126.42, 177.81 61.4, 82.15 -97.89, 25.94 290.77, 86.68 -60.53, -27.7 in-in in 7.4688 Saltbr-in 2.6513 HRD-in -85.44, -49.42 78.82, -6.43 in-in-in SNCiii in-in ActLoopNT-in 2.93 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -77.49, 164.36 APE9-dihe-na 100.65, -175.4 APE8-dihe-in -81.64, 115.53 APE8-rot-in 300.97 APE67-dihe-in -58.37, -37.59 -55.92, -37.43 APE12-dist-in 13.8351 APE11-dist-in 13.7728 APE10-dist-in 7.9511 APE9-dist-in 4.5825 None None None XRAY 1.7 0.203 0.236 A 345.0 309.0 7 35 35 0 [[29, 315]] 1.0 2v62 CK1_VRK2_HUMAN CK1 2e-103 351.3 1.0 261.0 261.0 185 186 187 189 191 61 73 77 163 165 164 166.0 232 220 215 214 213 212 211 210 209 122 Serine/threonine-protein kinase VRK2
CK1 VRK2 VRK2_HUMAN 2V62B Q86Y07 15 330 508.0 No_ligand No_ligand Active DFGin 7.6633 14.235 BLAminus -125.07, 178.48 58.38, 82.78 -95.02, 25.08 292.21, 85.61 -65.49, -19.52 in-in in 7.4809 Saltbr-in 3.1122 HRD-in -84.77, -51.43 82.43, -6.15 in-in-in SNCiii in-in ActLoopNT-in 2.8814 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -78.49, 164.48 APE9-dihe-na 105.42, -177.12 APE8-dihe-in -82.14, 116.45 APE8-rot-in 302.32 APE67-dihe-in -58.69, -38.25 -56.97, -36.01 APE12-dist-in 13.7404 APE11-dist-in 13.6627 APE10-dist-in 7.977 APE9-dist-in 4.6212 None None None XRAY 1.7 0.203 0.236 B 345.0 310.0 6 35 35 0 [[29, 315]] 1.0 2v62 CK1_VRK2_HUMAN CK1 2e-103 351.3 1.0 261.0 261.0 185 186 187 189 191 61 73 77 163 165 164 166.0 232 220 215 214 213 212 211 210 209 122 Serine/threonine-protein kinase VRK2

PDB: 2V62 — CK1 VRK2_HUMAN

Total number of chains: 2
Active chains: 2
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% 2V62B
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
CK1 VRK2 VRK2_HUMAN 2V62A Q86Y07 15 330 508.0 No_ligand No_ligand Active DFGin 7.5216 14.2783 BLAminus -126.42, 177.81 61.4, 82.15 -97.89, 25.94 290.77, 86.68 -60.53, -27.7 in-in in 7.4688 Saltbr-in 2.6513 HRD-in -85.44, -49.42 78.82, -6.43 in-in-in SNCiii in-in ActLoopNT-in 2.93 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -77.49, 164.36 APE9-dihe-na 100.65, -175.4 APE8-dihe-in -81.64, 115.53 APE8-rot-in 300.97 APE67-dihe-in -58.37, -37.59 -55.92, -37.43 APE12-dist-in 13.8351 APE11-dist-in 13.7728 APE10-dist-in 7.9511 APE9-dist-in 4.5825 None None None XRAY 1.7 0.203 0.236 A 345.0 309.0 7 35 35 0 [[29, 315]] 1.0 2v62 Homo sapiens CK1_VRK2_HUMAN CK1 2e-103 351.3 1.0 261.0 261.0 185 186 187 189 191 61 73 77 163 165 164 166.0 232 220 215 214 213 212 211 210 209 122 Serine/threonine-protein kinase VRK2
CK1 VRK2 VRK2_HUMAN 2V62B Q86Y07 15 330 508.0 No_ligand No_ligand Active DFGin 7.6633 14.235 BLAminus -125.07, 178.48 58.38, 82.78 -95.02, 25.08 292.21, 85.61 -65.49, -19.52 in-in in 7.4809 Saltbr-in 3.1122 HRD-in -84.77, -51.43 82.43, -6.15 in-in-in SNCiii in-in ActLoopNT-in 2.8814 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -78.49, 164.48 APE9-dihe-na 105.42, -177.12 APE8-dihe-in -82.14, 116.45 APE8-rot-in 302.32 APE67-dihe-in -58.69, -38.25 -56.97, -36.01 APE12-dist-in 13.7404 APE11-dist-in 13.6627 APE10-dist-in 7.977 APE9-dist-in 4.6212 None None None XRAY 1.7 0.203 0.236 B 345.0 310.0 6 35 35 0 [[29, 315]] 1.0 2v62 Homo sapiens CK1_VRK2_HUMAN CK1 2e-103 351.3 1.0 261.0 261.0 185 186 187 189 191 61 73 77 163 165 164 166.0 232 220 215 214 213 212 211 210 209 122 Serine/threonine-protein kinase VRK2

PDB: 2V62 — CK1 VRK2_HUMAN

Total number of chains: 0
Active chains: 0
Total number of genes: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name