PDB: 1ZYC — OTHER GCN2_YEAST

Total number of chains: 0
Active chains: 0
Total number of genes: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name

PDB: 1ZYC — OTHER GCN2_YEAST

Total number of chains: 4
Active chains: 0
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLBminus 4 100.0% 1ZYCC
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
OTHER GCN2-2 GCN2_YEAST 1ZYCA P15442 594 989 1659.0 No_ligand No_ligand Inactive DFGin 6.7904 13.7778 BLBminus -131.7, -171.67 47.61, 66.73 -71.22, 151.39 283.38, 67.64 -92.99, 59.26 out-out out 12.7211 Saltbr-out 11.4478 HRD-in -61.12, -52.58 78.37, -10.71 out-out-out SNCooo out-out ActLoopNT-out 8.8727 ActLoopCT-out nonTYR APEdihe_aaoii APEdist_nnoo APE10-dihe-na 999.0, 163.15 APE9-dihe-na 169.01, -31.7 APE8-dihe-out -64.24, -42.14 APE8-rot-in 320.94 APE67-dihe-in -60.78, -34.66 -75.99, -5.03 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-out 21.2987 APE9-dist-out 12.5381 None None None XRAY 3.0 0.234 0.299 A 303.0 259.0 34 42 17 25 [[292, 527], [599, 981]] 2.0 1zyc Saccharomyces cerevisiae OTHER_GCN2-2_YEAST NEK 7.9e-45 164.1 2.0 254.0 253.0 852 853 854 856 858 628 643 647 832 834 833 835.0 907 894 889 888 887 886 885 884 883 789 eIF-2-alpha kinase GCN2
OTHER GCN2-2 GCN2_YEAST 1ZYCB P15442 594 984 1659.0 No_ligand No_ligand Inactive DFGin 6.2856 13.8403 BLBminus -128.3, 178.61 53.63, 71.1 -67.59, 146.84 289.82, 65.34 -75.2, 122.9 out-out out 12.8521 Saltbr-out 8.902 HRD-in -62.83, -58.71 82.99, 2.24 out-out-out SNCooo out-out ActLoopNT-out 9.4502 ActLoopCT-out nonTYR APEdihe_aaooi APEdist_nnno APE10-dihe-na 999.0, 999.0 APE9-dihe-na 999.0, 26.12 APE8-dihe-out -124.2, -2.55 APE8-rot-out 44.97 APE67-dihe-in -75.72, -16.29 -90.7, 5.09 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-none 999.0 APE9-dist-out 13.7917 None None None XRAY 3.0 0.234 0.299 B 303.0 252.0 36 42 17 25 [[292, 527], [599, 981]] 2.0 1zyc Saccharomyces cerevisiae OTHER_GCN2-2_YEAST NEK 7.9e-45 164.1 2.0 254.0 253.0 852 853 854 856 858 628 643 647 832 834 833 835.0 907 894 889 888 887 886 885 884 883 789 eIF-2-alpha kinase GCN2
OTHER GCN2-2 GCN2_YEAST 1ZYCC P15442 594 995 1659.0 No_ligand No_ligand Inactive DFGin 6.4425 13.7063 BLBminus -164.97, -173.6 69.91, 38.41 -55.84, 134.83 280.23, 73.01 -81.91, 98.97 out-out out 12.5924 Saltbr-out 10.7813 HRD-in -70.78, -55.63 77.67, -5.04 out-out-out SNCooo out-out ActLoopNT-out 8.2024 ActLoopCT-out nonTYR APEdihe_aaoii APEdist_nnoo APE10-dihe-na 999.0, 151.36 APE9-dihe-na -129.88, -43.57 APE8-dihe-out -62.46, -13.29 APE8-rot-in 301.73 APE67-dihe-in -63.88, -15.68 -54.56, -44.19 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-out 18.623 APE9-dist-out 11.6273 None None None XRAY 3.0 0.234 0.299 C 303.0 269.0 30 42 18 24 [[292, 527], [599, 981]] 2.0 1zyc Saccharomyces cerevisiae OTHER_GCN2-2_YEAST NEK 7.9e-45 164.1 2.0 254.0 253.0 852 853 854 856 858 628 643 647 832 834 833 835.0 907 894 889 888 887 886 885 884 883 789 eIF-2-alpha kinase GCN2
OTHER GCN2-2 GCN2_YEAST 1ZYCD P15442 594 984 1659.0 No_ligand No_ligand Inactive DFGin 6.4148 14.1032 BLBminus -142.95, 175.22 76.84, 37.68 -54.42, 130.1 304.7, 74.41 -74.91, 124.96 out-out out 12.4726 Saltbr-out 10.3887 HRD-in -68.74, -41.54 67.58, 6.01 out-out-out SNCooo out-out ActLoopNT-out 9.2561 ActLoopCT-out nonTYR APEdihe_aaoii APEdist_nnoo APE10-dihe-na 999.0, 116.72 APE9-dihe-na -105.19, -3.34 APE8-dihe-out -77.61, -14.62 APE8-rot-in 292.44 APE67-dihe-in -78.43, -12.4 -66.46, -9.27 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-out 18.2827 APE9-dist-out 13.1814 None None None XRAY 3.0 0.234 0.299 D 303.0 254.0 34 42 18 24 [[292, 527], [599, 981]] 2.0 1zyc Saccharomyces cerevisiae OTHER_GCN2-2_YEAST NEK 7.9e-45 164.1 2.0 254.0 253.0 852 853 854 856 858 628 643 647 832 834 833 835.0 907 894 889 888 887 886 885 884 883 789 eIF-2-alpha kinase GCN2

PDB: 1ZYC — OTHER GCN2_YEAST

Total number of chains: 4
Active chains: 0
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLBminus 4 100.0% 1ZYCC
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
OTHER GCN2-2 GCN2_YEAST 1ZYCA P15442 594 989 1659.0 No_ligand No_ligand Inactive DFGin 6.7904 13.7778 BLBminus -131.7, -171.67 47.61, 66.73 -71.22, 151.39 283.38, 67.64 -92.99, 59.26 out-out out 12.7211 Saltbr-out 11.4478 HRD-in -61.12, -52.58 78.37, -10.71 out-out-out SNCooo out-out ActLoopNT-out 8.8727 ActLoopCT-out nonTYR APEdihe_aaoii APEdist_nnoo APE10-dihe-na 999.0, 163.15 APE9-dihe-na 169.01, -31.7 APE8-dihe-out -64.24, -42.14 APE8-rot-in 320.94 APE67-dihe-in -60.78, -34.66 -75.99, -5.03 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-out 21.2987 APE9-dist-out 12.5381 None None None XRAY 3.0 0.234 0.299 A 303.0 259.0 34 42 17 25 [[292, 527], [599, 981]] 2.0 1zyc Saccharomyces cerevisiae OTHER_GCN2-2_YEAST NEK 7.9e-45 164.1 2.0 254.0 253.0 852 853 854 856 858 628 643 647 832 834 833 835.0 907 894 889 888 887 886 885 884 883 789 eIF-2-alpha kinase GCN2
OTHER GCN2-2 GCN2_YEAST 1ZYCB P15442 594 984 1659.0 No_ligand No_ligand Inactive DFGin 6.2856 13.8403 BLBminus -128.3, 178.61 53.63, 71.1 -67.59, 146.84 289.82, 65.34 -75.2, 122.9 out-out out 12.8521 Saltbr-out 8.902 HRD-in -62.83, -58.71 82.99, 2.24 out-out-out SNCooo out-out ActLoopNT-out 9.4502 ActLoopCT-out nonTYR APEdihe_aaooi APEdist_nnno APE10-dihe-na 999.0, 999.0 APE9-dihe-na 999.0, 26.12 APE8-dihe-out -124.2, -2.55 APE8-rot-out 44.97 APE67-dihe-in -75.72, -16.29 -90.7, 5.09 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-none 999.0 APE9-dist-out 13.7917 None None None XRAY 3.0 0.234 0.299 B 303.0 252.0 36 42 17 25 [[292, 527], [599, 981]] 2.0 1zyc Saccharomyces cerevisiae OTHER_GCN2-2_YEAST NEK 7.9e-45 164.1 2.0 254.0 253.0 852 853 854 856 858 628 643 647 832 834 833 835.0 907 894 889 888 887 886 885 884 883 789 eIF-2-alpha kinase GCN2
OTHER GCN2-2 GCN2_YEAST 1ZYCC P15442 594 995 1659.0 No_ligand No_ligand Inactive DFGin 6.4425 13.7063 BLBminus -164.97, -173.6 69.91, 38.41 -55.84, 134.83 280.23, 73.01 -81.91, 98.97 out-out out 12.5924 Saltbr-out 10.7813 HRD-in -70.78, -55.63 77.67, -5.04 out-out-out SNCooo out-out ActLoopNT-out 8.2024 ActLoopCT-out nonTYR APEdihe_aaoii APEdist_nnoo APE10-dihe-na 999.0, 151.36 APE9-dihe-na -129.88, -43.57 APE8-dihe-out -62.46, -13.29 APE8-rot-in 301.73 APE67-dihe-in -63.88, -15.68 -54.56, -44.19 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-out 18.623 APE9-dist-out 11.6273 None None None XRAY 3.0 0.234 0.299 C 303.0 269.0 30 42 18 24 [[292, 527], [599, 981]] 2.0 1zyc Saccharomyces cerevisiae OTHER_GCN2-2_YEAST NEK 7.9e-45 164.1 2.0 254.0 253.0 852 853 854 856 858 628 643 647 832 834 833 835.0 907 894 889 888 887 886 885 884 883 789 eIF-2-alpha kinase GCN2
OTHER GCN2-2 GCN2_YEAST 1ZYCD P15442 594 984 1659.0 No_ligand No_ligand Inactive DFGin 6.4148 14.1032 BLBminus -142.95, 175.22 76.84, 37.68 -54.42, 130.1 304.7, 74.41 -74.91, 124.96 out-out out 12.4726 Saltbr-out 10.3887 HRD-in -68.74, -41.54 67.58, 6.01 out-out-out SNCooo out-out ActLoopNT-out 9.2561 ActLoopCT-out nonTYR APEdihe_aaoii APEdist_nnoo APE10-dihe-na 999.0, 116.72 APE9-dihe-na -105.19, -3.34 APE8-dihe-out -77.61, -14.62 APE8-rot-in 292.44 APE67-dihe-in -78.43, -12.4 -66.46, -9.27 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-out 18.2827 APE9-dist-out 13.1814 None None None XRAY 3.0 0.234 0.299 D 303.0 254.0 34 42 18 24 [[292, 527], [599, 981]] 2.0 1zyc Saccharomyces cerevisiae OTHER_GCN2-2_YEAST NEK 7.9e-45 164.1 2.0 254.0 253.0 852 853 854 856 858 628 643 647 832 834 833 835.0 907 894 889 888 887 886 885 884 883 789 eIF-2-alpha kinase GCN2