Ligand: OOY

Total number of chains: 3
Active chains: 0
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
None None 2 66.7% 6PMEC
DFGin None 1 33.3% 6PMEB
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
TYR NTRK1 NTRK1_HUMAN 6PMEB P04629 499 791 796.0 OOY:802 Type1 Inactive DFGin 8.0413 12.7752 None -108.23, 50.17 -34.62, -93.7 -97.7, 157.35 268.23, 140.64 158.45, -156.12 in-out in 9.6869 Saltbr-out 4.3617 HRD-in -75.61, -49.56 82.71, -16.4 out-out-none SNCoon out-none ActLoopNT-out 15.6778 ActLoopCT-none TYR APEdihe_niiai APEdist_aaai APE10-dihe-none 999.0, 119.79 APE9-dihe-in -136.64, 129.71 APE8-dihe-in -72.47, 62.28 APE8-rot-na 30.59 APE67-dihe-in -74.1, -16.42 -50.47, -31.16 APE12-dist-na 999.0 APE11-dist-na 999.0 APE10-dist-na 10.7569 APE9-dist-in 7.0187 None SEP677 SEP677 XRAY 3.0 0.259 0.315 B 311.0 271.0 22 30 25 5 [[510, 783]] 1.0 6pme TYR_NTRK1_HUMAN TYR 2.1e-100 341.3 2.0 260.0 259.0 667 668 669 671 673 544 560 564 647 649 648 650.0 709 697 692 691 690 689 688 687 686 590 High affinity nerve growth factor receptor
TYR NTRK1 NTRK1_HUMAN 6PMEA P04629 500 788 796.0 OOY:802 Type1 Inactive None 11.2737 14.866 None -103.64, 63.03 -6.61, -101.22 -108.6, -79.47 316.94, 83.99 80.48, -131.89 in-out in 9.6502 Saltbr-out 4.1971 HRD-in -82.82, -49.18 87.37, -21.9 out-out-in SNCooi out-in ActLoopNT-out 15.6261 ActLoopCT-in TYR APEdihe_iiiai APEdist_aaai APE10-dihe-in -117.61, 116.38 APE9-dihe-in -119.8, 127.41 APE8-dihe-in -74.42, 64.21 APE8-rot-na 33.13 APE67-dihe-in -65.79, -8.94 -53.59, -37.65 APE12-dist-na 999.0 APE11-dist-na 14.3493 APE10-dist-na 10.4008 APE9-dist-in 7.1239 None SEP677 SEP677 XRAY 3.0 0.259 0.315 A 311.0 268.0 21 30 27 3 [[510, 783]] 1.0 6pme TYR_NTRK1_HUMAN TYR 2.1e-100 341.3 2.0 260.0 259.0 667 668 669 671 673 544 560 564 647 649 648 650.0 709 697 692 691 690 689 688 687 686 590 High affinity nerve growth factor receptor
TYR NTRK1 NTRK1_HUMAN 6PMEC P04629 500 790 796.0 OOY:802 Type1 Inactive None 11.5194 15.0044 None -105.17, 39.93 27.01, -158.9 -47.91, -126.82 299.14, 109.98 111.56, -123.09 in-out in 9.6725 Saltbr-out 4.9611 HRD-in -71.5, -57.03 89.79, -15.29 out-out-in SNCooi out-in ActLoopNT-out 15.6199 ActLoopCT-in TYR APEdihe_iiiai APEdist_aaai APE10-dihe-in -111.99, 111.57 APE9-dihe-in -114.5, 136.16 APE8-dihe-in -76.15, 63.17 APE8-rot-na 31.13 APE67-dihe-in -65.29, -26.47 -45.99, -41.18 APE12-dist-na 16.0835 APE11-dist-na 14.6809 APE10-dist-na 10.6659 APE9-dist-in 6.9642 None SEP677 SEP677 XRAY 3.0 0.259 0.315 C 311.0 274.0 17 30 28 2 [[510, 783]] 1.0 6pme TYR_NTRK1_HUMAN TYR 2.1e-100 341.3 2.0 260.0 259.0 667 668 669 671 673 544 560 564 647 649 648 650.0 709 697 692 691 690 689 688 687 686 590 High affinity nerve growth factor receptor

Ligand: OOY

Total number of chains: 3
Active chains: 0
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
None None 2 66.7% 6PMEC
DFGin None 1 33.3% 6PMEB
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
TYR NTRK1 NTRK1_HUMAN 6PMEB P04629 499 791 796.0 OOY:802 Type1 Inactive DFGin 8.0413 12.7752 None -108.23, 50.17 -34.62, -93.7 -97.7, 157.35 268.23, 140.64 158.45, -156.12 in-out in 9.6869 Saltbr-out 4.3617 HRD-in -75.61, -49.56 82.71, -16.4 out-out-none SNCoon out-none ActLoopNT-out 15.6778 ActLoopCT-none TYR APEdihe_niiai APEdist_aaai APE10-dihe-none 999.0, 119.79 APE9-dihe-in -136.64, 129.71 APE8-dihe-in -72.47, 62.28 APE8-rot-na 30.59 APE67-dihe-in -74.1, -16.42 -50.47, -31.16 APE12-dist-na 999.0 APE11-dist-na 999.0 APE10-dist-na 10.7569 APE9-dist-in 7.0187 None SEP677 SEP677 XRAY 3.0 0.259 0.315 B 311.0 271.0 22 30 25 5 [[510, 783]] 1.0 6pme Homo sapiens TYR_NTRK1_HUMAN TYR 2.1e-100 341.3 2.0 260.0 259.0 667 668 669 671 673 544 560 564 647 649 648 650.0 709 697 692 691 690 689 688 687 686 590 High affinity nerve growth factor receptor
TYR NTRK1 NTRK1_HUMAN 6PMEA P04629 500 788 796.0 OOY:802 Type1 Inactive None 11.2737 14.866 None -103.64, 63.03 -6.61, -101.22 -108.6, -79.47 316.94, 83.99 80.48, -131.89 in-out in 9.6502 Saltbr-out 4.1971 HRD-in -82.82, -49.18 87.37, -21.9 out-out-in SNCooi out-in ActLoopNT-out 15.6261 ActLoopCT-in TYR APEdihe_iiiai APEdist_aaai APE10-dihe-in -117.61, 116.38 APE9-dihe-in -119.8, 127.41 APE8-dihe-in -74.42, 64.21 APE8-rot-na 33.13 APE67-dihe-in -65.79, -8.94 -53.59, -37.65 APE12-dist-na 999.0 APE11-dist-na 14.3493 APE10-dist-na 10.4008 APE9-dist-in 7.1239 None SEP677 SEP677 XRAY 3.0 0.259 0.315 A 311.0 268.0 21 30 27 3 [[510, 783]] 1.0 6pme Homo sapiens TYR_NTRK1_HUMAN TYR 2.1e-100 341.3 2.0 260.0 259.0 667 668 669 671 673 544 560 564 647 649 648 650.0 709 697 692 691 690 689 688 687 686 590 High affinity nerve growth factor receptor
TYR NTRK1 NTRK1_HUMAN 6PMEC P04629 500 790 796.0 OOY:802 Type1 Inactive None 11.5194 15.0044 None -105.17, 39.93 27.01, -158.9 -47.91, -126.82 299.14, 109.98 111.56, -123.09 in-out in 9.6725 Saltbr-out 4.9611 HRD-in -71.5, -57.03 89.79, -15.29 out-out-in SNCooi out-in ActLoopNT-out 15.6199 ActLoopCT-in TYR APEdihe_iiiai APEdist_aaai APE10-dihe-in -111.99, 111.57 APE9-dihe-in -114.5, 136.16 APE8-dihe-in -76.15, 63.17 APE8-rot-na 31.13 APE67-dihe-in -65.29, -26.47 -45.99, -41.18 APE12-dist-na 16.0835 APE11-dist-na 14.6809 APE10-dist-na 10.6659 APE9-dist-in 6.9642 None SEP677 SEP677 XRAY 3.0 0.259 0.315 C 311.0 274.0 17 30 28 2 [[510, 783]] 1.0 6pme Homo sapiens TYR_NTRK1_HUMAN TYR 2.1e-100 341.3 2.0 260.0 259.0 667 668 669 671 673 544 560 564 647 649 648 650.0 709 697 692 691 690 689 688 687 686 590 High affinity nerve growth factor receptor

Ligand: OOY

Total number of chains: 0
Active chains: 0
Total number of genes: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name