Ligand: HMD

Total number of chains: 1
Active chains: 0
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLBminus 1 100.0% 1DM2A
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
CMGC CDK2 CDK2_HUMAN 1DM2A P24941 1 298 298.0 HMD:400 Type1 Inactive DFGin 8.0829 15.1741 BLBminus -135.33, 165.14 60.62, 59.67 -72.31, 120.69 284.69, 66.98 -63.1, 154.86 out-out out 14.6608 Saltbr-out 13.0592 HRD-in -85.27, -51.86 82.75, -26.54 out-none-out SNCono none-out ActLoopNT-none 999.0 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_nnno APE10-dihe-na 999.0, 999.0 APE9-dihe-na 999.0, -26.99 APE8-dihe-in -79.63, 132.91 APE8-rot-in 302.05 APE67-dihe-in -50.64, -29.01 -107.85, 0.53 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-none 999.0 APE9-dist-out 10.8503 None None None XRAY 2.1 0.228 0.267 A 298.0 274.0 24 28 13 15 [[4, 286]] 1.0 1dm2 CMGC_CDK2_HUMAN CMGC 6.3e-90 307.9 1.0 301.0 301.0 144 145 146 148 150 33 51 55 124 126 125 127.0 185 172 167 166 165 164 163 162 161 81 Cyclin-dependent kinase 2

Ligand: HMD

Total number of chains: 2
Active chains: 1
Total number of genes: 2
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 1 50.0% 2PMOX
DFGin BLBminus 1 50.0% 1DM2A
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
CMGC CDK2 CDK2_HUMAN 1DM2A P24941 1 298 298.0 HMD:400 Type1 Inactive DFGin 8.0829 15.1741 BLBminus -135.33, 165.14 60.62, 59.67 -72.31, 120.69 284.69, 66.98 -63.1, 154.86 out-out out 14.6608 Saltbr-out 13.0592 HRD-in -85.27, -51.86 82.75, -26.54 out-none-out SNCono none-out ActLoopNT-none 999.0 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_nnno APE10-dihe-na 999.0, 999.0 APE9-dihe-na 999.0, -26.99 APE8-dihe-in -79.63, 132.91 APE8-rot-in 302.05 APE67-dihe-in -50.64, -29.01 -107.85, 0.53 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-none 999.0 APE9-dist-out 10.8503 None None None XRAY 2.1 0.228 0.267 A 298.0 274.0 24 28 13 15 [[4, 286]] 1.0 1dm2 Homo sapiens CMGC_CDK2_HUMAN CMGC 6.3e-90 307.9 1.0 301.0 301.0 144 145 146 148 150 33 51 55 124 126 125 127.0 185 172 167 166 165 164 163 162 161 81 Cyclin-dependent kinase 2
OTHER PK7 Q7YTF7_PLAF7 2PMOX Q7YTF7 1 343 343.0 HMD:60400 Type1 Active DFGin 6.4676 13.0845 BLAminus -140.49, 178.33 62.93, 97.32 -104.27, 23.28 300.69, 100.95 -68.83, -12.14 in-in in 9.8989 Saltbr-in 3.4066 HRD-in -75.56, -46.21 63.09, 29.57 in-in-in SNCiii in-in ActLoopNT-in 3.0021 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -145.86, 131.21 APE9-dihe-na 139.87, -137.65 APE8-dihe-in -116.63, 120.86 APE8-rot-in 304.69 APE67-dihe-in -69.65, -8.42 -47.54, -49.39 APE12-dist-in 10.3016 APE11-dist-in 11.8649 APE10-dist-in 6.3924 APE9-dist-in 3.7224 None None None XRAY 2.9 0.235 0.316 X 348.0 335.0 8 26 26 0 [[28, 321]] 1.0 2pmo Plasmodium falciparum OTHER_PK7_PLAF7 CAMK 9.9e-37 136.1 1.0 256.0 256.0 189 190 191 193 195 55 88 92 169 171 170 172.0 229 215 210 209 208 207 206 205 204 118 mitogen-activated protein kinase kinase

Ligand: HMD

Total number of chains: 1
Active chains: 1
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 1 100.0% 2PMOX
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
OTHER PK7 Q7YTF7_PLAF7 2PMOX Q7YTF7 1 343 343.0 HMD:60400 Type1 Active DFGin 6.4676 13.0845 BLAminus -140.49, 178.33 62.93, 97.32 -104.27, 23.28 300.69, 100.95 -68.83, -12.14 in-in in 9.8989 Saltbr-in 3.4066 HRD-in -75.56, -46.21 63.09, 29.57 in-in-in SNCiii in-in ActLoopNT-in 3.0021 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -145.86, 131.21 APE9-dihe-na 139.87, -137.65 APE8-dihe-in -116.63, 120.86 APE8-rot-in 304.69 APE67-dihe-in -69.65, -8.42 -47.54, -49.39 APE12-dist-in 10.3016 APE11-dist-in 11.8649 APE10-dist-in 6.3924 APE9-dist-in 3.7224 None None None XRAY 2.9 0.235 0.316 X 348.0 335.0 8 26 26 0 [[28, 321]] 1.0 2pmo Plasmodium falciparum OTHER_PK7_PLAF7 CAMK 9.9e-37 136.1 1.0 256.0 256.0 189 190 191 193 195 55 88 92 169 171 170 172.0 229 215 210 209 208 207 206 205 204 118 mitogen-activated protein kinase kinase