OTHER_VPS15 (Serine/threonine-protein kinase VPS15)

Total number of chains: 0
Active chains: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Gene PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name

OTHER_VPS15 (Serine/threonine-protein kinase VPS15)

Total number of chains: 2
Active chains: 0
Spatial label Dihedral label Number of Chains Percent Representative
None None 2 100.0% 5DFZB
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
VPS15 VPS15_YEAST 5KC2B P22219 10 1454 1454.0 No_ligand No_ligand Inactive None 999.0 999.0 None -93.8, 141.16 -118.38, 157.37 -61.86, -35.59 999.0, 999.0 -93.25, 111.78 out-na out 18.1987 Saltbr-na 999.0 HRD-out -165.6, -174.49 105.73, 2.52 na-none-none SNCann none-none ActLoopNT-none 999.0 ActLoopCT-none nonTYR APEdihe_aannn APEdist_nnnn APE10-dihe-na 999.0, 999.0 APE9-dihe-na 999.0, 999.0 APE8-dihe-none 999.0, 999.0 APE8-rot-none 999.0 APE67-dihe-none -76.23, 157.13 999.0, -46.9 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-none 999.0 APE9-dist-none 999.0 None None None EM 28.0 999.0 999.0 B 1454.0 1224.0 32 36 12 24 [[20, 305]] 1.0 5kc2 Saccharomyces cerevisiae OTHER_VPS15_YEAST PIK3R4 1.2e-101 347.8 1.0 298.0 298.0 164 165 166 168 170 54 74 78 144 146 145 147.0 222 200 195 194 193 192 191 190 189 103 Serine/threonine-protein kinase VPS15
VPS15 VPS15_YEAST 5DFZB P22219 10 1454 1454.0 No_ligand No_ligand Inactive None 999.0 999.0 None -93.75, 141.2 -118.4, 157.37 -61.95, -35.53 999.0, 999.0 -93.26, 111.83 out-na out 18.1988 Saltbr-na 999.0 HRD-out -165.59, -174.48 105.73, 2.5 na-none-none SNCann none-none ActLoopNT-none 999.0 ActLoopCT-none nonTYR APEdihe_aannn APEdist_nnnn APE10-dihe-na 999.0, 999.0 APE9-dihe-na 999.0, 999.0 APE8-dihe-none 999.0, 999.0 APE8-rot-none 999.0 APE67-dihe-none -76.24, 157.14 999.0, -46.97 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-none 999.0 APE9-dist-none 999.0 None None None XRAY 4.4 0.369 0.376 B 1460.0 1224.0 32 36 12 24 [[20, 305]] 1.0 5dfz Saccharomyces cerevisiae OTHER_VPS15_YEAST PIK3R4 1.2e-101 347.8 1.0 298.0 298.0 164 165 166 168 170 54 74 78 144 146 145 147.0 222 200 195 194 193 192 191 190 189 103 Serine/threonine-protein kinase VPS15

OTHER_VPS15 (Serine/threonine-protein kinase VPS15)

Total number of chains: 2
Active chains: 0
Spatial label Dihedral label Number of Chains Percent Representative
None None 2 100.0% 5DFZB
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
VPS15 VPS15_YEAST 5KC2B P22219 10 1454 1454.0 No_ligand No_ligand Inactive None 999.0 999.0 None -93.8, 141.16 -118.38, 157.37 -61.86, -35.59 999.0, 999.0 -93.25, 111.78 out-na out 18.1987 Saltbr-na 999.0 HRD-out -165.6, -174.49 105.73, 2.52 na-none-none SNCann none-none ActLoopNT-none 999.0 ActLoopCT-none nonTYR APEdihe_aannn APEdist_nnnn APE10-dihe-na 999.0, 999.0 APE9-dihe-na 999.0, 999.0 APE8-dihe-none 999.0, 999.0 APE8-rot-none 999.0 APE67-dihe-none -76.23, 157.13 999.0, -46.9 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-none 999.0 APE9-dist-none 999.0 None None None EM 28.0 999.0 999.0 B 1454.0 1224.0 32 36 12 24 [[20, 305]] 1.0 5kc2 Saccharomyces cerevisiae OTHER_VPS15_YEAST PIK3R4 1.2e-101 347.8 1.0 298.0 298.0 164 165 166 168 170 54 74 78 144 146 145 147.0 222 200 195 194 193 192 191 190 189 103 Serine/threonine-protein kinase VPS15
VPS15 VPS15_YEAST 5DFZB P22219 10 1454 1454.0 No_ligand No_ligand Inactive None 999.0 999.0 None -93.75, 141.2 -118.4, 157.37 -61.95, -35.53 999.0, 999.0 -93.26, 111.83 out-na out 18.1988 Saltbr-na 999.0 HRD-out -165.59, -174.48 105.73, 2.5 na-none-none SNCann none-none ActLoopNT-none 999.0 ActLoopCT-none nonTYR APEdihe_aannn APEdist_nnnn APE10-dihe-na 999.0, 999.0 APE9-dihe-na 999.0, 999.0 APE8-dihe-none 999.0, 999.0 APE8-rot-none 999.0 APE67-dihe-none -76.24, 157.14 999.0, -46.97 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-none 999.0 APE9-dist-none 999.0 None None None XRAY 4.4 0.369 0.376 B 1460.0 1224.0 32 36 12 24 [[20, 305]] 1.0 5dfz Saccharomyces cerevisiae OTHER_VPS15_YEAST PIK3R4 1.2e-101 347.8 1.0 298.0 298.0 164 165 166 168 170 54 74 78 144 146 145 147.0 222 200 195 194 193 192 191 190 189 103 Serine/threonine-protein kinase VPS15