TYR_VKR2 (Guanylate cyclase)

Total number of chains: 0
Active chains: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Gene PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name

TYR_VKR2 (Guanylate cyclase)

Total number of chains: 3
Active chains: 0
Spatial label Dihedral label Number of Chains Percent Representative
DFGin ABAminus 3 100.0% 7ZVSA
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
VKR2 A0A3Q0KQ92_SCHMA 7ZVSA A0A3Q0KQ92 943 1257 1641.0 ADP:1301 ATPlike Inactive DFGin 6.4107 13.9115 ABAminus -108.2, -51.57 -108.14, 130.38 -125.76, 34.81 311.68, 99.72 -69.75, -23.67 in-out in 7.915 Saltbr-out 4.4345 HRD-in -84.85, -39.64 60.03, 4.72 out-in-none SNCoin in-none ActLoopNT-in 3.1146 ActLoopCT-none TYR APEdihe_nniai APEdist_aaai APE10-dihe-none 999.0, 999.0 APE9-dihe-none 999.0, 132.51 APE8-dihe-in -86.18, 75.72 APE8-rot-na 32.5 APE67-dihe-in -65.42, -24.56 -66.74, -36.8 APE12-dist-na 999.0 APE11-dist-na 999.0 APE10-dist-na 999.0 APE9-dist-in 7.6537 None None None XRAY 3.07 0.219 0.252 A 341.0 300.0 15 33 18 15 [[966, 1240]] 1.0 7zvs Schistosoma mansoni TYR_VKR2_SCHMA TYR 2.6e-69 239.5 1.0 253.0 253.0 1117 1118 1119 1121 1123 997 1014 1018 1097 1099 1098 1100.0 1162 1150 1145 1144 1143 1142 1141 1140 1139 1045 Guanylate cyclase
VKR2 A0A3Q0KQ92_SCHMA 7ZVSB A0A3Q0KQ92 946 1257 1641.0 ADP:1301 ATPlike Inactive DFGin 6.6225 14.5211 ABAminus -98.3, -71.59 -103.46, 126.3 -111.19, 44.98 301.93, 110.43 -72.41, -47.73 in-in in 8.9886 Saltbr-in 3.5916 HRD-in -85.3, -43.46 65.5, -4.13 in-in-none SNCiin in-none ActLoopNT-in 3.1678 ActLoopCT-none TYR APEdihe_niiai APEdist_aaai APE10-dihe-none 999.0, 149.82 APE9-dihe-in -99.67, 136.73 APE8-dihe-in -75.43, 94.78 APE8-rot-na 28.24 APE67-dihe-in -74.95, -28.65 -71.49, -32.64 APE12-dist-na 999.0 APE11-dist-na 999.0 APE10-dist-na 10.7742 APE9-dist-in 6.6 None None None XRAY 3.07 0.219 0.252 B 341.0 296.0 16 33 17 16 [[966, 1240]] 1.0 7zvs Schistosoma mansoni TYR_VKR2_SCHMA TYR 2.6e-69 239.5 1.0 253.0 253.0 1117 1118 1119 1121 1123 997 1014 1018 1097 1099 1098 1100.0 1162 1150 1145 1144 1143 1142 1141 1140 1139 1045 Guanylate cyclase
VKR2 A0A3Q0KQ92_SCHMA 7ZVSC A0A3Q0KQ92 943 1257 1641.0 No_ligand No_ligand Inactive DFGin 6.0054 13.8324 ABAminus -114.1, -14.29 -137.07, 136.39 -136.81, 23.63 315.21, 101.93 -62.12, -38.93 in-in in 8.718 Saltbr-in 3.2641 HRD-in -97.53, -48.83 70.66, -8.88 in-in-none SNCiin in-none ActLoopNT-in 2.7712 ActLoopCT-none TYR APEdihe_niiai APEdist_aaai APE10-dihe-none 999.0, 137.07 APE9-dihe-in -123.92, 94.05 APE8-dihe-in -73.1, 86.59 APE8-rot-na 33.68 APE67-dihe-in -48.63, -62.88 -70.05, -21.03 APE12-dist-na 999.0 APE11-dist-na 999.0 APE10-dist-na 7.8562 APE9-dist-in 7.1431 None None None XRAY 3.07 0.219 0.252 C 341.0 300.0 15 33 18 15 [[966, 1240]] 1.0 7zvs Schistosoma mansoni TYR_VKR2_SCHMA TYR 2.6e-69 239.5 1.0 253.0 253.0 1117 1118 1119 1121 1123 997 1014 1018 1097 1099 1098 1100.0 1162 1150 1145 1144 1143 1142 1141 1140 1139 1045 Guanylate cyclase

TYR_VKR2 (Guanylate cyclase)

Total number of chains: 3
Active chains: 0
Spatial label Dihedral label Number of Chains Percent Representative
DFGin ABAminus 3 100.0% 7ZVSA
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
VKR2 A0A3Q0KQ92_SCHMA 7ZVSA A0A3Q0KQ92 943 1257 1641.0 ADP:1301 ATPlike Inactive DFGin 6.4107 13.9115 ABAminus -108.2, -51.57 -108.14, 130.38 -125.76, 34.81 311.68, 99.72 -69.75, -23.67 in-out in 7.915 Saltbr-out 4.4345 HRD-in -84.85, -39.64 60.03, 4.72 out-in-none SNCoin in-none ActLoopNT-in 3.1146 ActLoopCT-none TYR APEdihe_nniai APEdist_aaai APE10-dihe-none 999.0, 999.0 APE9-dihe-none 999.0, 132.51 APE8-dihe-in -86.18, 75.72 APE8-rot-na 32.5 APE67-dihe-in -65.42, -24.56 -66.74, -36.8 APE12-dist-na 999.0 APE11-dist-na 999.0 APE10-dist-na 999.0 APE9-dist-in 7.6537 None None None XRAY 3.07 0.219 0.252 A 341.0 300.0 15 33 18 15 [[966, 1240]] 1.0 7zvs Schistosoma mansoni TYR_VKR2_SCHMA TYR 2.6e-69 239.5 1.0 253.0 253.0 1117 1118 1119 1121 1123 997 1014 1018 1097 1099 1098 1100.0 1162 1150 1145 1144 1143 1142 1141 1140 1139 1045 Guanylate cyclase
VKR2 A0A3Q0KQ92_SCHMA 7ZVSB A0A3Q0KQ92 946 1257 1641.0 ADP:1301 ATPlike Inactive DFGin 6.6225 14.5211 ABAminus -98.3, -71.59 -103.46, 126.3 -111.19, 44.98 301.93, 110.43 -72.41, -47.73 in-in in 8.9886 Saltbr-in 3.5916 HRD-in -85.3, -43.46 65.5, -4.13 in-in-none SNCiin in-none ActLoopNT-in 3.1678 ActLoopCT-none TYR APEdihe_niiai APEdist_aaai APE10-dihe-none 999.0, 149.82 APE9-dihe-in -99.67, 136.73 APE8-dihe-in -75.43, 94.78 APE8-rot-na 28.24 APE67-dihe-in -74.95, -28.65 -71.49, -32.64 APE12-dist-na 999.0 APE11-dist-na 999.0 APE10-dist-na 10.7742 APE9-dist-in 6.6 None None None XRAY 3.07 0.219 0.252 B 341.0 296.0 16 33 17 16 [[966, 1240]] 1.0 7zvs Schistosoma mansoni TYR_VKR2_SCHMA TYR 2.6e-69 239.5 1.0 253.0 253.0 1117 1118 1119 1121 1123 997 1014 1018 1097 1099 1098 1100.0 1162 1150 1145 1144 1143 1142 1141 1140 1139 1045 Guanylate cyclase
VKR2 A0A3Q0KQ92_SCHMA 7ZVSC A0A3Q0KQ92 943 1257 1641.0 No_ligand No_ligand Inactive DFGin 6.0054 13.8324 ABAminus -114.1, -14.29 -137.07, 136.39 -136.81, 23.63 315.21, 101.93 -62.12, -38.93 in-in in 8.718 Saltbr-in 3.2641 HRD-in -97.53, -48.83 70.66, -8.88 in-in-none SNCiin in-none ActLoopNT-in 2.7712 ActLoopCT-none TYR APEdihe_niiai APEdist_aaai APE10-dihe-none 999.0, 137.07 APE9-dihe-in -123.92, 94.05 APE8-dihe-in -73.1, 86.59 APE8-rot-na 33.68 APE67-dihe-in -48.63, -62.88 -70.05, -21.03 APE12-dist-na 999.0 APE11-dist-na 999.0 APE10-dist-na 7.8562 APE9-dist-in 7.1431 None None None XRAY 3.07 0.219 0.252 C 341.0 300.0 15 33 18 15 [[966, 1240]] 1.0 7zvs Schistosoma mansoni TYR_VKR2_SCHMA TYR 2.6e-69 239.5 1.0 253.0 253.0 1117 1118 1119 1121 1123 997 1014 1018 1097 1099 1098 1100.0 1162 1150 1145 1144 1143 1142 1141 1140 1139 1045 Guanylate cyclase