CMGC_PK6 (Cyclin-dependent kinase 2 homolog)

Total number of chains: 0
Active chains: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Gene PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name

CMGC_PK6 (Cyclin-dependent kinase 2 homolog)

Total number of chains: 5
Active chains: 0
Spatial label Dihedral label Number of Chains Percent Representative
DFGin None 5 100.0% 9CMZB
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
PK6 Q8IDW1_PLAF7 9CMZA Q8IDW1 4 294 305.0 A1AZE:405 Type1 Inactive DFGin 5.9578 12.5997 None -94.14, -157.81 -38.02, 124.16 -88.24, 13.86 299.83, 1.24 -70.53, -12.65 in-in in 9.1302 Saltbr-in 2.8519 HRD-in -80.4, -44.87 68.81, 6.06 in-in-in SNCiii in-in ActLoopNT-in 2.877 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -67.42, -47.85 APE9-dihe-na -56.07, 137.1 APE8-dihe-in -48.14, 142.29 APE8-rot-in 301.26 APE67-dihe-in -63.45, -19.54 -54.62, -52.55 APE12-dist-in 13.528 APE11-dist-in 11.9916 APE10-dist-in 6.3177 APE9-dist-in 3.5559 C44N,C53R,K86A,C222N,K237A None None XRAY 2.45 0.221 0.255 A 306.0 278.0 13 25 25 0 [[9, 293]] 1.0 9cmz Plasmodium falciparum CMGC_PK6_PLAF7 CMGC 5.2e-69 244.5 3.0 300.0 298.0 160 161 162 164 166 38 57 61 140 142 141 143.0 198 185 180 179 178 177 176 175 174 100 Cyclin-dependent kinase 2 homolog
PK6 Q8IDW1_PLAF7 9CMZB Q8IDW1 4 296 305.0 A1AZE:403 Type1 Inactive DFGin 5.9492 12.3581 None -87.61, -154.47 -39.14, 133.87 -103.66, 12.02 299.03, 6.05 -77.37, -6.63 in-in in 9.3411 Saltbr-in 2.7516 HRD-in -77.49, -49.61 70.86, 8.17 in-in-in SNCiii in-in ActLoopNT-in 2.897 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -64.12, -41.81 APE9-dihe-na -63.53, 145.63 APE8-dihe-in -55.7, 134.62 APE8-rot-in 319.67 APE67-dihe-in -64.53, -20.52 -45.12, -48.09 APE12-dist-in 13.2082 APE11-dist-in 11.7673 APE10-dist-in 6.036 APE9-dist-in 3.6503 C44N,C53R,K86A,C222N,K237A None None XRAY 2.45 0.221 0.255 B 306.0 284.0 9 25 25 0 [[9, 293]] 1.0 9cmz Plasmodium falciparum CMGC_PK6_PLAF7 CMGC 5.2e-69 244.5 3.0 300.0 298.0 160 161 162 164 166 38 57 61 140 142 141 143.0 198 185 180 179 178 177 176 175 174 100 Cyclin-dependent kinase 2 homolog
PK6 Q8IDW1_PLAF7 9CMZC Q8IDW1 4 295 305.0 A1AZE:402 Type1 Inactive DFGin 6.0911 13.2991 None -103.9, -129.12 -42.46, 117.59 -94.29, 9.37 297.87, 3.31 -71.04, -2.09 in-none in 9.7093 Saltbr-none 999.0 HRD-in -71.55, -46.08 68.76, 6.39 none-in-in SNCnii in-in ActLoopNT-in 2.8638 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -82.14, -45.59 APE9-dihe-na -71.51, 142.15 APE8-dihe-in -54.87, 141.86 APE8-rot-in 290.82 APE67-dihe-in -54.29, -32.67 -58.55, -41.7 APE12-dist-in 13.1707 APE11-dist-in 11.8463 APE10-dist-in 6.3518 APE9-dist-in 3.1273 C44N,C53R,K86A,C222N,K237A None None XRAY 2.45 0.221 0.255 C 306.0 271.0 21 25 25 0 [[9, 293]] 1.0 9cmz Plasmodium falciparum CMGC_PK6_PLAF7 CMGC 5.2e-69 244.5 3.0 300.0 298.0 160 161 162 164 166 38 57 61 140 142 141 143.0 198 185 180 179 178 177 176 175 174 100 Cyclin-dependent kinase 2 homolog
PK6 Q8IDW1_PLAF7 8U2OA Q8IDW1 1 298 305.0 V3O:60405 Type1 Inactive DFGin 5.8965 12.5105 None -94.96, -148.98 -42.04, 131.33 -95.74, 12.17 304.54, 179.87 -67.72, -14.66 in-in in 9.5513 Saltbr-in 2.5363 HRD-in -78.09, -50.71 66.76, 14.89 in-in-in SNCiii in-in ActLoopNT-in 2.8753 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -72.6, -44.34 APE9-dihe-na -64.9, 136.38 APE8-dihe-in -57.5, 138.34 APE8-rot-in 311.13 APE67-dihe-in -57.61, -26.63 -51.17, -51.11 APE12-dist-in 13.3021 APE11-dist-in 11.6241 APE10-dist-in 6.0228 APE9-dist-in 3.4997 C44N,C53R,K86A,C222N,K237A None None XRAY 2.15 0.221 0.281 A 307.0 287.0 10 25 25 0 [[9, 293]] 1.0 8u2o Plasmodium falciparum CMGC_PK6_PLAF7 CMGC 5.3e-69 244.5 3.0 300.0 298.0 160 161 162 164 166 38 57 61 140 142 141 143.0 198 185 180 179 178 177 176 175 174 100 Cyclin-dependent kinase 2 homolog
PK6 Q8IDW1_PLAF7 8U2OB Q8IDW1 4 294 305.0 V3O:60405 Type1 Inactive DFGin 5.8335 12.5651 None -95.64, -148.11 -40.43, 130.23 -98.6, 12.15 305.65, 177.87 -65.69, -13.43 in-in in 9.5275 Saltbr-in 2.6266 HRD-in -80.22, -50.28 65.88, 13.5 in-in-out SNCiio in-out ActLoopNT-in 2.8247 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_iiii APE10-dihe-na -75.1, -40.16 APE9-dihe-na -65.58, 130.1 APE8-dihe-in -62.82, 145.01 APE8-rot-out 89.31 APE67-dihe-in -59.91, -27.62 -49.15, -51.42 APE12-dist-in 13.4102 APE11-dist-in 11.7273 APE10-dist-in 6.0201 APE9-dist-in 3.4878 C44N,C53R,K86A,C222N,K237A None None XRAY 2.15 0.221 0.281 B 307.0 276.0 15 25 25 0 [[9, 293]] 1.0 8u2o Plasmodium falciparum CMGC_PK6_PLAF7 CMGC 5.3e-69 244.5 3.0 300.0 298.0 160 161 162 164 166 38 57 61 140 142 141 143.0 198 185 180 179 178 177 176 175 174 100 Cyclin-dependent kinase 2 homolog

CMGC_PK6 (Cyclin-dependent kinase 2 homolog)

Total number of chains: 5
Active chains: 0
Spatial label Dihedral label Number of Chains Percent Representative
DFGin None 5 100.0% 9CMZB
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
PK6 Q8IDW1_PLAF7 9CMZA Q8IDW1 4 294 305.0 A1AZE:405 Type1 Inactive DFGin 5.9578 12.5997 None -94.14, -157.81 -38.02, 124.16 -88.24, 13.86 299.83, 1.24 -70.53, -12.65 in-in in 9.1302 Saltbr-in 2.8519 HRD-in -80.4, -44.87 68.81, 6.06 in-in-in SNCiii in-in ActLoopNT-in 2.877 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -67.42, -47.85 APE9-dihe-na -56.07, 137.1 APE8-dihe-in -48.14, 142.29 APE8-rot-in 301.26 APE67-dihe-in -63.45, -19.54 -54.62, -52.55 APE12-dist-in 13.528 APE11-dist-in 11.9916 APE10-dist-in 6.3177 APE9-dist-in 3.5559 C44N,C53R,K86A,C222N,K237A None None XRAY 2.45 0.221 0.255 A 306.0 278.0 13 25 25 0 [[9, 293]] 1.0 9cmz Plasmodium falciparum CMGC_PK6_PLAF7 CMGC 5.2e-69 244.5 3.0 300.0 298.0 160 161 162 164 166 38 57 61 140 142 141 143.0 198 185 180 179 178 177 176 175 174 100 Cyclin-dependent kinase 2 homolog
PK6 Q8IDW1_PLAF7 9CMZB Q8IDW1 4 296 305.0 A1AZE:403 Type1 Inactive DFGin 5.9492 12.3581 None -87.61, -154.47 -39.14, 133.87 -103.66, 12.02 299.03, 6.05 -77.37, -6.63 in-in in 9.3411 Saltbr-in 2.7516 HRD-in -77.49, -49.61 70.86, 8.17 in-in-in SNCiii in-in ActLoopNT-in 2.897 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -64.12, -41.81 APE9-dihe-na -63.53, 145.63 APE8-dihe-in -55.7, 134.62 APE8-rot-in 319.67 APE67-dihe-in -64.53, -20.52 -45.12, -48.09 APE12-dist-in 13.2082 APE11-dist-in 11.7673 APE10-dist-in 6.036 APE9-dist-in 3.6503 C44N,C53R,K86A,C222N,K237A None None XRAY 2.45 0.221 0.255 B 306.0 284.0 9 25 25 0 [[9, 293]] 1.0 9cmz Plasmodium falciparum CMGC_PK6_PLAF7 CMGC 5.2e-69 244.5 3.0 300.0 298.0 160 161 162 164 166 38 57 61 140 142 141 143.0 198 185 180 179 178 177 176 175 174 100 Cyclin-dependent kinase 2 homolog
PK6 Q8IDW1_PLAF7 9CMZC Q8IDW1 4 295 305.0 A1AZE:402 Type1 Inactive DFGin 6.0911 13.2991 None -103.9, -129.12 -42.46, 117.59 -94.29, 9.37 297.87, 3.31 -71.04, -2.09 in-none in 9.7093 Saltbr-none 999.0 HRD-in -71.55, -46.08 68.76, 6.39 none-in-in SNCnii in-in ActLoopNT-in 2.8638 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -82.14, -45.59 APE9-dihe-na -71.51, 142.15 APE8-dihe-in -54.87, 141.86 APE8-rot-in 290.82 APE67-dihe-in -54.29, -32.67 -58.55, -41.7 APE12-dist-in 13.1707 APE11-dist-in 11.8463 APE10-dist-in 6.3518 APE9-dist-in 3.1273 C44N,C53R,K86A,C222N,K237A None None XRAY 2.45 0.221 0.255 C 306.0 271.0 21 25 25 0 [[9, 293]] 1.0 9cmz Plasmodium falciparum CMGC_PK6_PLAF7 CMGC 5.2e-69 244.5 3.0 300.0 298.0 160 161 162 164 166 38 57 61 140 142 141 143.0 198 185 180 179 178 177 176 175 174 100 Cyclin-dependent kinase 2 homolog
PK6 Q8IDW1_PLAF7 8U2OA Q8IDW1 1 298 305.0 V3O:60405 Type1 Inactive DFGin 5.8965 12.5105 None -94.96, -148.98 -42.04, 131.33 -95.74, 12.17 304.54, 179.87 -67.72, -14.66 in-in in 9.5513 Saltbr-in 2.5363 HRD-in -78.09, -50.71 66.76, 14.89 in-in-in SNCiii in-in ActLoopNT-in 2.8753 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -72.6, -44.34 APE9-dihe-na -64.9, 136.38 APE8-dihe-in -57.5, 138.34 APE8-rot-in 311.13 APE67-dihe-in -57.61, -26.63 -51.17, -51.11 APE12-dist-in 13.3021 APE11-dist-in 11.6241 APE10-dist-in 6.0228 APE9-dist-in 3.4997 C44N,C53R,K86A,C222N,K237A None None XRAY 2.15 0.221 0.281 A 307.0 287.0 10 25 25 0 [[9, 293]] 1.0 8u2o Plasmodium falciparum CMGC_PK6_PLAF7 CMGC 5.3e-69 244.5 3.0 300.0 298.0 160 161 162 164 166 38 57 61 140 142 141 143.0 198 185 180 179 178 177 176 175 174 100 Cyclin-dependent kinase 2 homolog
PK6 Q8IDW1_PLAF7 8U2OB Q8IDW1 4 294 305.0 V3O:60405 Type1 Inactive DFGin 5.8335 12.5651 None -95.64, -148.11 -40.43, 130.23 -98.6, 12.15 305.65, 177.87 -65.69, -13.43 in-in in 9.5275 Saltbr-in 2.6266 HRD-in -80.22, -50.28 65.88, 13.5 in-in-out SNCiio in-out ActLoopNT-in 2.8247 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_iiii APE10-dihe-na -75.1, -40.16 APE9-dihe-na -65.58, 130.1 APE8-dihe-in -62.82, 145.01 APE8-rot-out 89.31 APE67-dihe-in -59.91, -27.62 -49.15, -51.42 APE12-dist-in 13.4102 APE11-dist-in 11.7273 APE10-dist-in 6.0201 APE9-dist-in 3.4878 C44N,C53R,K86A,C222N,K237A None None XRAY 2.15 0.221 0.281 B 307.0 276.0 15 25 25 0 [[9, 293]] 1.0 8u2o Plasmodium falciparum CMGC_PK6_PLAF7 CMGC 5.3e-69 244.5 3.0 300.0 298.0 160 161 162 164 166 38 57 61 140 142 141 143.0 198 185 180 179 178 177 176 175 174 100 Cyclin-dependent kinase 2 homolog