PDB: AF-Q14004 — CMGC CDK13_HUMAN

Total number of chains: 2
Active chains: 2
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% AF-Q14004-K1A
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
CMGC CDK13 CDK13_HUMAN AF-Q14004-K1A Q14004 697 1006 1512.0 No_ligand No_ligand Active DFGin 6.733 15.1013 BLAminus -133.85, 174.95 58.79, 70.48 -83.2, 17.64 283.83, 73.08 -59.83, -32.7 in-in in 8.6108 Saltbr-in 2.7496 HRD-in -75.29, -48.73 63.6, 12.33 in-in-in SNCiii in-in ActLoopNT-in 2.8983 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -124.12, 171.2 APE9-dihe-na 62.22, 132.61 APE8-dihe-in -56.89, 135.65 APE8-rot-in 300.03 APE67-dihe-in -66.93, -23.69 -49.12, -40.94 APE12-dist-in 13.1391 APE11-dist-in 11.1408 APE10-dist-in 6.6805 APE9-dist-in 3.2929 None None None AF2 -1.0 1.0 1.0 A 310.0 310.0 0 29 29 0 [[705, 998]] 1.0 AF-Q14004-K1 CMGC_CDK13_HUMAN CMGC 1.4e-85 293.0 1.0 301.0 301.0 854 855 856 858 860 734 752 756 834 836 835 837.0 896 883 878 877 876 875 874 873 872 792 Cyclin-dependent kinase 13
CMGC CDK13 CDK13_HUMAN AF-Q14004-K3A Q14004 697 1006 1512.0 No_ligand No_ligand Active DFGin 7.0412 14.6322 BLAminus -137.73, -179.63 58.96, 61.27 -76.86, 21.5 284.17, 76.14 -63.09, -27.83 in-in in 8.592 Saltbr-in 2.7299 HRD-in -79.66, -49.7 63.38, 21.27 in-in-in SNCiii in-in ActLoopNT-in 2.8949 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -124.96, 171.3 APE9-dihe-na 61.14, 129.16 APE8-dihe-in -55.19, 137.57 APE8-rot-in 296.3 APE67-dihe-in -65.38, -25.93 -48.74, -44.02 APE12-dist-in 12.8344 APE11-dist-in 10.7035 APE10-dist-in 6.4126 APE9-dist-in 3.3406 None None None AF2 -1.0 1.0 1.0 A 310.0 310.0 0 29 29 0 [[705, 998]] 1.0 AF-Q14004-K3 CMGC_CDK13_HUMAN CMGC 1.4e-85 293.0 1.0 301.0 301.0 854 855 856 858 860 734 752 756 834 836 835 837.0 896 883 878 877 876 875 874 873 872 792 Cyclin-dependent kinase 13

PDB: AF-Q14004 — CMGC CDK13_HUMAN

Total number of chains: 2
Active chains: 2
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% AF-Q14004-K1A
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
CMGC CDK13 CDK13_HUMAN AF-Q14004-K1A Q14004 697 1006 1512.0 No_ligand No_ligand Active DFGin 6.733 15.1013 BLAminus -133.85, 174.95 58.79, 70.48 -83.2, 17.64 283.83, 73.08 -59.83, -32.7 in-in in 8.6108 Saltbr-in 2.7496 HRD-in -75.29, -48.73 63.6, 12.33 in-in-in SNCiii in-in ActLoopNT-in 2.8983 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -124.12, 171.2 APE9-dihe-na 62.22, 132.61 APE8-dihe-in -56.89, 135.65 APE8-rot-in 300.03 APE67-dihe-in -66.93, -23.69 -49.12, -40.94 APE12-dist-in 13.1391 APE11-dist-in 11.1408 APE10-dist-in 6.6805 APE9-dist-in 3.2929 None None None AF2 -1.0 1.0 1.0 A 310.0 310.0 0 29 29 0 [[705, 998]] 1.0 AF-Q14004-K1 Homo sapiens CMGC_CDK13_HUMAN CMGC 1.4e-85 293.0 1.0 301.0 301.0 854 855 856 858 860 734 752 756 834 836 835 837.0 896 883 878 877 876 875 874 873 872 792 Cyclin-dependent kinase 13
CMGC CDK13 CDK13_HUMAN AF-Q14004-K3A Q14004 697 1006 1512.0 No_ligand No_ligand Active DFGin 7.0412 14.6322 BLAminus -137.73, -179.63 58.96, 61.27 -76.86, 21.5 284.17, 76.14 -63.09, -27.83 in-in in 8.592 Saltbr-in 2.7299 HRD-in -79.66, -49.7 63.38, 21.27 in-in-in SNCiii in-in ActLoopNT-in 2.8949 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -124.96, 171.3 APE9-dihe-na 61.14, 129.16 APE8-dihe-in -55.19, 137.57 APE8-rot-in 296.3 APE67-dihe-in -65.38, -25.93 -48.74, -44.02 APE12-dist-in 12.8344 APE11-dist-in 10.7035 APE10-dist-in 6.4126 APE9-dist-in 3.3406 None None None AF2 -1.0 1.0 1.0 A 310.0 310.0 0 29 29 0 [[705, 998]] 1.0 AF-Q14004-K3 Homo sapiens CMGC_CDK13_HUMAN CMGC 1.4e-85 293.0 1.0 301.0 301.0 854 855 856 858 860 734 752 756 834 836 835 837.0 896 883 878 877 876 875 874 873 872 792 Cyclin-dependent kinase 13

PDB: AF-Q14004 — CMGC CDK13_HUMAN

Total number of chains: 0
Active chains: 0
Total number of genes: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name