PDB: AF-Q00535 — CMGC CDK5_HUMAN

Total number of chains: 2
Active chains: 2
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% AF-Q00535-K1A
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
CMGC CDK5 CDK5_HUMAN AF-Q00535-K1A Q00535 1 292 292.0 No_ligand No_ligand Active DFGin 6.8121 15.0795 BLAminus -137.71, 176.76 52.72, 65.61 -76.52, 17.03 281.04, 72.01 -63.52, -30.68 in-in in 8.8174 Saltbr-in 2.7367 HRD-in -77.47, -45.4 62.19, 14.23 in-in-in SNCiii in-in ActLoopNT-in 2.8666 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -132.25, 162.61 APE9-dihe-na 62.11, 128.26 APE8-dihe-in -54.35, 135.75 APE8-rot-in 298.8 APE67-dihe-in -65.0, -24.32 -44.79, -46.3 APE12-dist-in 13.2835 APE11-dist-in 10.4527 APE10-dist-in 6.8641 APE9-dist-in 3.2781 None None None AF2 -1.0 1.0 1.0 A 292.0 292.0 0 28 28 0 [[4, 286]] 1.0 AF-Q00535-K1 CMGC_CDK5_HUMAN CMGC 4e-84 288.8 1.0 301.0 301.0 143 144 145 147 149 33 51 55 123 125 124 126.0 184 171 166 165 164 163 162 161 160 81 Cyclin-dependent kinase 5
CMGC CDK5 CDK5_HUMAN AF-Q00535-K3A Q00535 1 292 292.0 No_ligand No_ligand Active DFGin 6.7214 14.9428 BLAminus -139.19, 173.54 59.01, 63.04 -76.77, 15.26 281.96, 72.04 -59.74, -32.22 in-in in 8.9267 Saltbr-in 2.821 HRD-in -77.38, -51.01 62.6, 14.42 in-in-in SNCiii in-in ActLoopNT-in 2.8423 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -129.79, 159.19 APE9-dihe-na 60.88, 136.97 APE8-dihe-in -57.12, 135.78 APE8-rot-in 296.35 APE67-dihe-in -65.12, -22.17 -41.34, -44.93 APE12-dist-in 13.0008 APE11-dist-in 10.5199 APE10-dist-in 6.701 APE9-dist-in 3.61 None None None AF2 -1.0 1.0 1.0 A 292.0 292.0 0 28 28 0 [[4, 286]] 1.0 AF-Q00535-K3 CMGC_CDK5_HUMAN CMGC 4e-84 288.8 1.0 301.0 301.0 143 144 145 147 149 33 51 55 123 125 124 126.0 184 171 166 165 164 163 162 161 160 81 Cyclin-dependent kinase 5

PDB: AF-Q00535 — CMGC CDK5_HUMAN

Total number of chains: 2
Active chains: 2
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% AF-Q00535-K1A
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
CMGC CDK5 CDK5_HUMAN AF-Q00535-K1A Q00535 1 292 292.0 No_ligand No_ligand Active DFGin 6.8121 15.0795 BLAminus -137.71, 176.76 52.72, 65.61 -76.52, 17.03 281.04, 72.01 -63.52, -30.68 in-in in 8.8174 Saltbr-in 2.7367 HRD-in -77.47, -45.4 62.19, 14.23 in-in-in SNCiii in-in ActLoopNT-in 2.8666 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -132.25, 162.61 APE9-dihe-na 62.11, 128.26 APE8-dihe-in -54.35, 135.75 APE8-rot-in 298.8 APE67-dihe-in -65.0, -24.32 -44.79, -46.3 APE12-dist-in 13.2835 APE11-dist-in 10.4527 APE10-dist-in 6.8641 APE9-dist-in 3.2781 None None None AF2 -1.0 1.0 1.0 A 292.0 292.0 0 28 28 0 [[4, 286]] 1.0 AF-Q00535-K1 Homo sapiens CMGC_CDK5_HUMAN CMGC 4e-84 288.8 1.0 301.0 301.0 143 144 145 147 149 33 51 55 123 125 124 126.0 184 171 166 165 164 163 162 161 160 81 Cyclin-dependent kinase 5
CMGC CDK5 CDK5_HUMAN AF-Q00535-K3A Q00535 1 292 292.0 No_ligand No_ligand Active DFGin 6.7214 14.9428 BLAminus -139.19, 173.54 59.01, 63.04 -76.77, 15.26 281.96, 72.04 -59.74, -32.22 in-in in 8.9267 Saltbr-in 2.821 HRD-in -77.38, -51.01 62.6, 14.42 in-in-in SNCiii in-in ActLoopNT-in 2.8423 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -129.79, 159.19 APE9-dihe-na 60.88, 136.97 APE8-dihe-in -57.12, 135.78 APE8-rot-in 296.35 APE67-dihe-in -65.12, -22.17 -41.34, -44.93 APE12-dist-in 13.0008 APE11-dist-in 10.5199 APE10-dist-in 6.701 APE9-dist-in 3.61 None None None AF2 -1.0 1.0 1.0 A 292.0 292.0 0 28 28 0 [[4, 286]] 1.0 AF-Q00535-K3 Homo sapiens CMGC_CDK5_HUMAN CMGC 4e-84 288.8 1.0 301.0 301.0 143 144 145 147 149 33 51 55 123 125 124 126.0 184 171 166 165 164 163 162 161 160 81 Cyclin-dependent kinase 5

PDB: AF-Q00535 — CMGC CDK5_HUMAN

Total number of chains: 0
Active chains: 0
Total number of genes: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name