PDB: AF-P54760 — TYR EPHB4_HUMAN

Total number of chains: 2
Active chains: 2
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% AF-P54760-K1A
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
TYR EPHB4 EPHB4_HUMAN AF-P54760-K1A P54760 607 884 987.0 No_ligand No_ligand Active DFGin 5.9745 13.8686 BLAminus -139.74, -179.4 64.18, 66.44 -86.68, 11.54 302.15, 96.73 -58.75, -33.49 in-in in 7.9845 Saltbr-in 2.704 HRD-in -80.56, -43.43 66.67, -18.44 in-in-in SNCiii in-in ActLoopNT-in 2.9144 ActLoopCT-in TYR APEdihe_iiiai APEdist_aaai APE10-dihe-in -63.66, 132.17 APE9-dihe-in -122.16, 137.66 APE8-dihe-in -75.12, 84.65 APE8-rot-na 34.37 APE67-dihe-in -67.33, -22.06 -45.78, -45.95 APE12-dist-na 13.4807 APE11-dist-na 9.8128 APE10-dist-na 10.4217 APE9-dist-in 6.3593 None None None AF2 -1.0 1.0 1.0 A 278.0 278.0 0 33 33 0 [[615, 876]] 1.0 AF-P54760-K1 TYR_EPHB4_HUMAN TYR 2e-104 354.4 2.0 261.0 260.0 757 758 759 761 763 647 664 668 737 739 738 740.0 802 790 785 784 783 782 781 780 779 694 Ephrin type-B receptor 4
TYR EPHB4 EPHB4_HUMAN AF-P54760-K3A P54760 607 884 987.0 No_ligand No_ligand Active DFGin 5.8062 14.1507 BLAminus -143.99, -175.54 62.87, 66.13 -83.54, 8.28 297.5, 100.05 -58.46, -33.53 in-in in 8.059 Saltbr-in 2.6824 HRD-in -82.2, -47.78 67.39, -9.2 in-in-in SNCiii in-in ActLoopNT-in 2.9207 ActLoopCT-in TYR APEdihe_iiiai APEdist_aaai APE10-dihe-in -68.19, 139.12 APE9-dihe-in -138.81, 146.93 APE8-dihe-in -78.16, 77.82 APE8-rot-na 36.7 APE67-dihe-in -64.24, -26.99 -41.53, -46.33 APE12-dist-na 14.2442 APE11-dist-na 10.4648 APE10-dist-na 10.1929 APE9-dist-in 5.9846 None None None AF2 -1.0 1.0 1.0 A 278.0 278.0 0 33 33 0 [[615, 876]] 1.0 AF-P54760-K3 TYR_EPHB4_HUMAN TYR 2e-104 354.4 2.0 261.0 260.0 757 758 759 761 763 647 664 668 737 739 738 740.0 802 790 785 784 783 782 781 780 779 694 Ephrin type-B receptor 4

PDB: AF-P54760 — TYR EPHB4_HUMAN

Total number of chains: 2
Active chains: 2
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% AF-P54760-K1A
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
TYR EPHB4 EPHB4_HUMAN AF-P54760-K1A P54760 607 884 987.0 No_ligand No_ligand Active DFGin 5.9745 13.8686 BLAminus -139.74, -179.4 64.18, 66.44 -86.68, 11.54 302.15, 96.73 -58.75, -33.49 in-in in 7.9845 Saltbr-in 2.704 HRD-in -80.56, -43.43 66.67, -18.44 in-in-in SNCiii in-in ActLoopNT-in 2.9144 ActLoopCT-in TYR APEdihe_iiiai APEdist_aaai APE10-dihe-in -63.66, 132.17 APE9-dihe-in -122.16, 137.66 APE8-dihe-in -75.12, 84.65 APE8-rot-na 34.37 APE67-dihe-in -67.33, -22.06 -45.78, -45.95 APE12-dist-na 13.4807 APE11-dist-na 9.8128 APE10-dist-na 10.4217 APE9-dist-in 6.3593 None None None AF2 -1.0 1.0 1.0 A 278.0 278.0 0 33 33 0 [[615, 876]] 1.0 AF-P54760-K1 Homo sapiens TYR_EPHB4_HUMAN TYR 2e-104 354.4 2.0 261.0 260.0 757 758 759 761 763 647 664 668 737 739 738 740.0 802 790 785 784 783 782 781 780 779 694 Ephrin type-B receptor 4
TYR EPHB4 EPHB4_HUMAN AF-P54760-K3A P54760 607 884 987.0 No_ligand No_ligand Active DFGin 5.8062 14.1507 BLAminus -143.99, -175.54 62.87, 66.13 -83.54, 8.28 297.5, 100.05 -58.46, -33.53 in-in in 8.059 Saltbr-in 2.6824 HRD-in -82.2, -47.78 67.39, -9.2 in-in-in SNCiii in-in ActLoopNT-in 2.9207 ActLoopCT-in TYR APEdihe_iiiai APEdist_aaai APE10-dihe-in -68.19, 139.12 APE9-dihe-in -138.81, 146.93 APE8-dihe-in -78.16, 77.82 APE8-rot-na 36.7 APE67-dihe-in -64.24, -26.99 -41.53, -46.33 APE12-dist-na 14.2442 APE11-dist-na 10.4648 APE10-dist-na 10.1929 APE9-dist-in 5.9846 None None None AF2 -1.0 1.0 1.0 A 278.0 278.0 0 33 33 0 [[615, 876]] 1.0 AF-P54760-K3 Homo sapiens TYR_EPHB4_HUMAN TYR 2e-104 354.4 2.0 261.0 260.0 757 758 759 761 763 647 664 668 737 739 738 740.0 802 790 785 784 783 782 781 780 779 694 Ephrin type-B receptor 4

PDB: AF-P54760 — TYR EPHB4_HUMAN

Total number of chains: 0
Active chains: 0
Total number of genes: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name