PDB: AF-P54753 — TYR EPHB3_HUMAN

Total number of chains: 2
Active chains: 2
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% AF-P54753-K1A
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
TYR EPHB3 EPHB3_HUMAN AF-P54753-K1A P54753 625 902 998.0 No_ligand No_ligand Active DFGin 5.7493 14.1527 BLAminus -140.36, 179.42 61.35, 72.48 -85.75, 11.94 298.24, 98.38 -58.34, -35.37 in-in in 7.9026 Saltbr-in 2.642 HRD-in -78.07, -44.57 68.31, -14.24 in-in-in SNCiii in-in ActLoopNT-in 2.9276 ActLoopCT-in TYR APEdihe_iiiai APEdist_aaai APE10-dihe-in -59.19, 128.25 APE9-dihe-in -133.93, 131.98 APE8-dihe-in -78.19, 81.64 APE8-rot-na 36.59 APE67-dihe-in -68.62, -12.96 -41.31, -53.28 APE12-dist-na 13.4759 APE11-dist-na 9.6581 APE10-dist-na 8.3858 APE9-dist-in 5.9374 None None None AF2 -1.0 1.0 1.0 A 278.0 278.0 0 33 33 0 [[633, 894]] 1.0 AF-P54753-K1 TYR_EPHB3_HUMAN TYR 1.9e-105 357.8 2.0 261.0 260.0 775 776 777 779 781 665 682 686 755 757 756 758.0 820 808 803 802 801 800 799 798 797 712 Ephrin type-B receptor 3
TYR EPHB3 EPHB3_HUMAN AF-P54753-K3A P54753 625 902 998.0 No_ligand No_ligand Active DFGin 5.7954 13.8156 BLAminus -144.45, -175.24 63.81, 65.98 -85.57, 9.01 304.03, 103.13 -59.04, -32.59 in-in in 7.9266 Saltbr-in 2.6712 HRD-in -82.82, -48.98 67.74, -9.37 in-in-in SNCiii in-in ActLoopNT-in 2.9356 ActLoopCT-in TYR APEdihe_iiiai APEdist_aaai APE10-dihe-in -71.11, 140.47 APE9-dihe-in -137.08, 148.64 APE8-dihe-in -76.58, 77.54 APE8-rot-na 36.57 APE67-dihe-in -65.03, -24.4 -39.42, -48.94 APE12-dist-na 14.2568 APE11-dist-na 10.4432 APE10-dist-na 10.1077 APE9-dist-in 5.936 None None None AF2 -1.0 1.0 1.0 A 278.0 278.0 0 33 33 0 [[633, 894]] 1.0 AF-P54753-K3 TYR_EPHB3_HUMAN TYR 1.9e-105 357.8 2.0 261.0 260.0 775 776 777 779 781 665 682 686 755 757 756 758.0 820 808 803 802 801 800 799 798 797 712 Ephrin type-B receptor 3

PDB: AF-P54753 — TYR EPHB3_HUMAN

Total number of chains: 2
Active chains: 2
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% AF-P54753-K1A
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
TYR EPHB3 EPHB3_HUMAN AF-P54753-K1A P54753 625 902 998.0 No_ligand No_ligand Active DFGin 5.7493 14.1527 BLAminus -140.36, 179.42 61.35, 72.48 -85.75, 11.94 298.24, 98.38 -58.34, -35.37 in-in in 7.9026 Saltbr-in 2.642 HRD-in -78.07, -44.57 68.31, -14.24 in-in-in SNCiii in-in ActLoopNT-in 2.9276 ActLoopCT-in TYR APEdihe_iiiai APEdist_aaai APE10-dihe-in -59.19, 128.25 APE9-dihe-in -133.93, 131.98 APE8-dihe-in -78.19, 81.64 APE8-rot-na 36.59 APE67-dihe-in -68.62, -12.96 -41.31, -53.28 APE12-dist-na 13.4759 APE11-dist-na 9.6581 APE10-dist-na 8.3858 APE9-dist-in 5.9374 None None None AF2 -1.0 1.0 1.0 A 278.0 278.0 0 33 33 0 [[633, 894]] 1.0 AF-P54753-K1 Homo sapiens TYR_EPHB3_HUMAN TYR 1.9e-105 357.8 2.0 261.0 260.0 775 776 777 779 781 665 682 686 755 757 756 758.0 820 808 803 802 801 800 799 798 797 712 Ephrin type-B receptor 3
TYR EPHB3 EPHB3_HUMAN AF-P54753-K3A P54753 625 902 998.0 No_ligand No_ligand Active DFGin 5.7954 13.8156 BLAminus -144.45, -175.24 63.81, 65.98 -85.57, 9.01 304.03, 103.13 -59.04, -32.59 in-in in 7.9266 Saltbr-in 2.6712 HRD-in -82.82, -48.98 67.74, -9.37 in-in-in SNCiii in-in ActLoopNT-in 2.9356 ActLoopCT-in TYR APEdihe_iiiai APEdist_aaai APE10-dihe-in -71.11, 140.47 APE9-dihe-in -137.08, 148.64 APE8-dihe-in -76.58, 77.54 APE8-rot-na 36.57 APE67-dihe-in -65.03, -24.4 -39.42, -48.94 APE12-dist-na 14.2568 APE11-dist-na 10.4432 APE10-dist-na 10.1077 APE9-dist-in 5.936 None None None AF2 -1.0 1.0 1.0 A 278.0 278.0 0 33 33 0 [[633, 894]] 1.0 AF-P54753-K3 Homo sapiens TYR_EPHB3_HUMAN TYR 1.9e-105 357.8 2.0 261.0 260.0 775 776 777 779 781 665 682 686 755 757 756 758.0 820 808 803 802 801 800 799 798 797 712 Ephrin type-B receptor 3

PDB: AF-P54753 — TYR EPHB3_HUMAN

Total number of chains: 0
Active chains: 0
Total number of genes: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name