PDB: AF-P50613 — CMGC CDK7_HUMAN

Total number of chains: 2
Active chains: 2
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% AF-P50613-K1A
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
CMGC CDK7 CDK7_HUMAN AF-P50613-K1A P50613 4 303 346.0 No_ligand No_ligand Active DFGin 6.9468 14.6507 BLAminus -139.37, 174.94 56.44, 65.77 -76.49, 16.79 285.4, 76.38 -56.51, -40.53 in-in in 9.0692 Saltbr-in 2.7811 HRD-in -73.36, -47.54 60.11, 19.26 in-in-in SNCiii in-in ActLoopNT-in 2.9256 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -131.44, 167.69 APE9-dihe-na 62.53, 130.0 APE8-dihe-in -57.01, 134.36 APE8-rot-in 299.11 APE67-dihe-in -63.68, -24.26 -47.72, -44.22 APE12-dist-in 12.8777 APE11-dist-in 10.698 APE10-dist-in 6.323 APE9-dist-in 3.3855 None None None AF2 -1.0 1.0 1.0 A 301.0 301.0 0 28 28 0 [[12, 295]] 1.0 AF-P50613-K1 CMGC_CDK7_HUMAN CMGC 9.5e-79 272.6 1.0 301.0 301.0 154 155 156 158 160 41 62 66 134 136 135 137.0 195 182 177 176 175 174 173 172 171 92 Cyclin-dependent kinase 7
CMGC CDK7 CDK7_HUMAN AF-P50613-K3A P50613 4 303 346.0 No_ligand No_ligand Active DFGin 6.865 14.6355 BLAminus -137.06, 174.38 58.01, 69.42 -79.21, 16.29 289.72, 83.63 -59.38, -30.4 in-in in 9.1988 Saltbr-in 2.9 HRD-in -77.13, -48.76 60.55, 22.8 in-in-in SNCiii in-in ActLoopNT-in 2.8472 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -132.28, 162.28 APE9-dihe-na 61.56, 143.42 APE8-dihe-in -57.15, 134.76 APE8-rot-in 295.02 APE67-dihe-in -64.26, -20.94 -45.41, -43.91 APE12-dist-in 12.5596 APE11-dist-in 10.5143 APE10-dist-in 6.3243 APE9-dist-in 3.6743 None None None AF2 -1.0 1.0 1.0 A 301.0 301.0 0 28 28 0 [[12, 295]] 1.0 AF-P50613-K3 CMGC_CDK7_HUMAN CMGC 9.5e-79 272.6 1.0 301.0 301.0 154 155 156 158 160 41 62 66 134 136 135 137.0 195 182 177 176 175 174 173 172 171 92 Cyclin-dependent kinase 7

PDB: AF-P50613 — CMGC CDK7_HUMAN

Total number of chains: 2
Active chains: 2
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% AF-P50613-K1A
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
CMGC CDK7 CDK7_HUMAN AF-P50613-K1A P50613 4 303 346.0 No_ligand No_ligand Active DFGin 6.9468 14.6507 BLAminus -139.37, 174.94 56.44, 65.77 -76.49, 16.79 285.4, 76.38 -56.51, -40.53 in-in in 9.0692 Saltbr-in 2.7811 HRD-in -73.36, -47.54 60.11, 19.26 in-in-in SNCiii in-in ActLoopNT-in 2.9256 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -131.44, 167.69 APE9-dihe-na 62.53, 130.0 APE8-dihe-in -57.01, 134.36 APE8-rot-in 299.11 APE67-dihe-in -63.68, -24.26 -47.72, -44.22 APE12-dist-in 12.8777 APE11-dist-in 10.698 APE10-dist-in 6.323 APE9-dist-in 3.3855 None None None AF2 -1.0 1.0 1.0 A 301.0 301.0 0 28 28 0 [[12, 295]] 1.0 AF-P50613-K1 Homo sapiens CMGC_CDK7_HUMAN CMGC 9.5e-79 272.6 1.0 301.0 301.0 154 155 156 158 160 41 62 66 134 136 135 137.0 195 182 177 176 175 174 173 172 171 92 Cyclin-dependent kinase 7
CMGC CDK7 CDK7_HUMAN AF-P50613-K3A P50613 4 303 346.0 No_ligand No_ligand Active DFGin 6.865 14.6355 BLAminus -137.06, 174.38 58.01, 69.42 -79.21, 16.29 289.72, 83.63 -59.38, -30.4 in-in in 9.1988 Saltbr-in 2.9 HRD-in -77.13, -48.76 60.55, 22.8 in-in-in SNCiii in-in ActLoopNT-in 2.8472 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -132.28, 162.28 APE9-dihe-na 61.56, 143.42 APE8-dihe-in -57.15, 134.76 APE8-rot-in 295.02 APE67-dihe-in -64.26, -20.94 -45.41, -43.91 APE12-dist-in 12.5596 APE11-dist-in 10.5143 APE10-dist-in 6.3243 APE9-dist-in 3.6743 None None None AF2 -1.0 1.0 1.0 A 301.0 301.0 0 28 28 0 [[12, 295]] 1.0 AF-P50613-K3 Homo sapiens CMGC_CDK7_HUMAN CMGC 9.5e-79 272.6 1.0 301.0 301.0 154 155 156 158 160 41 62 66 134 136 135 137.0 195 182 177 176 175 174 173 172 171 92 Cyclin-dependent kinase 7

PDB: AF-P50613 — CMGC CDK7_HUMAN

Total number of chains: 0
Active chains: 0
Total number of genes: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name