PDB: AF-P17948 — TYR VGFR1_HUMAN

Total number of chains: 2
Active chains: 2
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% AF-P17948-K1A
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
TYR FLT1 VGFR1_HUMAN AF-P17948-K1A P17948 819 1164 1338.0 No_ligand No_ligand Active DFGin 6.6388 13.7604 BLAminus -136.19, -179.71 66.86, 59.25 -80.37, 14.54 291.11, 84.89 -60.01, -28.12 in-in in 7.24 Saltbr-in 2.6378 HRD-in -81.32, -43.95 66.24, -14.75 in-in-in SNCiii in-in ActLoopNT-in 2.9663 ActLoopCT-in TYR APEdihe_iiiai APEdist_aaai APE10-dihe-in -64.36, 109.29 APE9-dihe-in -125.67, 155.45 APE8-dihe-in -79.64, 84.22 APE8-rot-na 35.95 APE67-dihe-in -59.74, -27.17 -45.11, -41.32 APE12-dist-na 14.514 APE11-dist-na 8.2636 APE10-dist-na 10.6284 APE9-dist-in 6.4274 None None None AF2 -1.0 1.0 1.0 A 346.0 346.0 0 30 30 0 [[827, 1156]] 1.0 AF-P17948-K1 TYR_FLT1_HUMAN TYR 2.9e-102 347.4 1.0 260.0 260.0 1039 1040 1041 1043 1045 861 878 882 1019 1021 1020 1022.0 1081 1069 1064 1063 1062 1061 1060 1059 1058 910 Vascular endothelial growth factor receptor 1
TYR FLT1 VGFR1_HUMAN AF-P17948-K3A P17948 819 1164 1338.0 No_ligand No_ligand Active DFGin 6.7513 13.5414 BLAminus -129.08, 179.07 59.25, 64.67 -75.13, 12.9 288.8, 85.82 -60.89, -33.75 in-in in 7.6366 Saltbr-in 2.76 HRD-in -84.1, -45.3 66.25, -2.48 in-in-in SNCiii in-in ActLoopNT-in 2.8814 ActLoopCT-in TYR APEdihe_iiiai APEdist_aaai APE10-dihe-in -56.35, 140.24 APE9-dihe-in -120.74, 145.64 APE8-dihe-in -80.1, 61.84 APE8-rot-na 36.69 APE67-dihe-in -60.78, -25.42 -47.63, -39.79 APE12-dist-na 14.6356 APE11-dist-na 8.8778 APE10-dist-na 11.9939 APE9-dist-in 7.4877 None None None AF2 -1.0 1.0 1.0 A 346.0 346.0 0 30 30 0 [[827, 1156]] 1.0 AF-P17948-K3 TYR_FLT1_HUMAN TYR 2.9e-102 347.4 1.0 260.0 260.0 1039 1040 1041 1043 1045 861 878 882 1019 1021 1020 1022.0 1081 1069 1064 1063 1062 1061 1060 1059 1058 910 Vascular endothelial growth factor receptor 1

PDB: AF-P17948 — TYR VGFR1_HUMAN

Total number of chains: 2
Active chains: 2
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% AF-P17948-K1A
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
TYR FLT1 VGFR1_HUMAN AF-P17948-K1A P17948 819 1164 1338.0 No_ligand No_ligand Active DFGin 6.6388 13.7604 BLAminus -136.19, -179.71 66.86, 59.25 -80.37, 14.54 291.11, 84.89 -60.01, -28.12 in-in in 7.24 Saltbr-in 2.6378 HRD-in -81.32, -43.95 66.24, -14.75 in-in-in SNCiii in-in ActLoopNT-in 2.9663 ActLoopCT-in TYR APEdihe_iiiai APEdist_aaai APE10-dihe-in -64.36, 109.29 APE9-dihe-in -125.67, 155.45 APE8-dihe-in -79.64, 84.22 APE8-rot-na 35.95 APE67-dihe-in -59.74, -27.17 -45.11, -41.32 APE12-dist-na 14.514 APE11-dist-na 8.2636 APE10-dist-na 10.6284 APE9-dist-in 6.4274 None None None AF2 -1.0 1.0 1.0 A 346.0 346.0 0 30 30 0 [[827, 1156]] 1.0 AF-P17948-K1 Homo sapiens TYR_FLT1_HUMAN TYR 2.9e-102 347.4 1.0 260.0 260.0 1039 1040 1041 1043 1045 861 878 882 1019 1021 1020 1022.0 1081 1069 1064 1063 1062 1061 1060 1059 1058 910 Vascular endothelial growth factor receptor 1
TYR FLT1 VGFR1_HUMAN AF-P17948-K3A P17948 819 1164 1338.0 No_ligand No_ligand Active DFGin 6.7513 13.5414 BLAminus -129.08, 179.07 59.25, 64.67 -75.13, 12.9 288.8, 85.82 -60.89, -33.75 in-in in 7.6366 Saltbr-in 2.76 HRD-in -84.1, -45.3 66.25, -2.48 in-in-in SNCiii in-in ActLoopNT-in 2.8814 ActLoopCT-in TYR APEdihe_iiiai APEdist_aaai APE10-dihe-in -56.35, 140.24 APE9-dihe-in -120.74, 145.64 APE8-dihe-in -80.1, 61.84 APE8-rot-na 36.69 APE67-dihe-in -60.78, -25.42 -47.63, -39.79 APE12-dist-na 14.6356 APE11-dist-na 8.8778 APE10-dist-na 11.9939 APE9-dist-in 7.4877 None None None AF2 -1.0 1.0 1.0 A 346.0 346.0 0 30 30 0 [[827, 1156]] 1.0 AF-P17948-K3 Homo sapiens TYR_FLT1_HUMAN TYR 2.9e-102 347.4 1.0 260.0 260.0 1039 1040 1041 1043 1045 861 878 882 1019 1021 1020 1022.0 1081 1069 1064 1063 1062 1061 1060 1059 1058 910 Vascular endothelial growth factor receptor 1

PDB: AF-P17948 — TYR VGFR1_HUMAN

Total number of chains: 0
Active chains: 0
Total number of genes: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name