PDB: 9QCX — 2 kinases

Total number of chains: 2
Active chains: 0
Total number of genes: 2
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% 9QCXK
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
CMGC CDK2 CDK2_HUMAN 9QCXK P24941 1 292 298.0 No_ligand No_ligand Inactive DFGin 6.7189 16.0414 BLAminus -144.83, 178.78 57.4, 64.51 -84.56, 50.23 281.94, 71.88 -85.61, -30.32 in-in in 9.2703 Saltbr-in 3.2363 HRD-in -67.06, -51.02 68.85, 2.16 in-in-out SNCiio in-out ActLoopNT-in 2.5952 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_iooi APE10-dihe-na -167.43, 154.34 APE9-dihe-na -64.57, 162.43 APE8-dihe-in -64.83, 167.28 APE8-rot-out 196.35 APE67-dihe-in -64.39, -23.47 -61.67, -44.4 APE12-dist-in 10.9366 APE11-dist-out 5.9634 APE10-dist-out 8.9488 APE9-dist-in 3.98 None None None EM 2.6 999.0 999.0 K 301.0 292.0 0 28 28 0 [[4, 286]] 1.0 9qcx CMGC_CDK2_HUMAN CMGC 6.6e-90 307.8 1.0 301.0 301.0 144 145 146 148 150 33 51 55 124 126 125 127.0 185 172 167 166 165 164 163 162 161 81 Cyclin-dependent kinase 2
CMGC CDK7 CDK7_HUMAN 9QCXJ P50613 9 346 346.0 No_ligand No_ligand Inactive DFGin 6.6963 16.0265 BLAminus -131.02, -177.03 59.81, 66.92 -86.78, 26.87 276.81, 73.59 -75.67, -10.97 in-out in 8.7931 Saltbr-out 3.9707 HRD-in -71.21, -46.31 66.3, 0.75 out-in-out SNCoio in-out ActLoopNT-in 2.7535 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_iooi APE10-dihe-na -103.75, 161.28 APE9-dihe-na -68.95, 168.1 APE8-dihe-in -56.3, 142.34 APE8-rot-out 173.25 APE67-dihe-in -65.83, -25.32 -64.61, -15.36 APE12-dist-in 10.4856 APE11-dist-out 5.5683 APE10-dist-out 9.089 APE9-dist-in 3.8595 None None None EM 2.6 999.0 999.0 J 391.0 309.0 0 28 28 0 [[12, 295]] 1.0 9qcx CMGC_CDK7_HUMAN CMGC 2.4e-78 271.1 1.0 301.0 301.0 154 155 156 158 160 41 62 66 134 136 135 137.0 195 182 177 176 175 174 173 172 171 92 Cyclin-dependent kinase 7

PDB: 9QCX — 2 kinases

Total number of chains: 2
Active chains: 0
Total number of genes: 2
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% 9QCXK
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
CMGC CDK2 CDK2_HUMAN 9QCXK P24941 1 292 298.0 No_ligand No_ligand Inactive DFGin 6.7189 16.0414 BLAminus -144.83, 178.78 57.4, 64.51 -84.56, 50.23 281.94, 71.88 -85.61, -30.32 in-in in 9.2703 Saltbr-in 3.2363 HRD-in -67.06, -51.02 68.85, 2.16 in-in-out SNCiio in-out ActLoopNT-in 2.5952 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_iooi APE10-dihe-na -167.43, 154.34 APE9-dihe-na -64.57, 162.43 APE8-dihe-in -64.83, 167.28 APE8-rot-out 196.35 APE67-dihe-in -64.39, -23.47 -61.67, -44.4 APE12-dist-in 10.9366 APE11-dist-out 5.9634 APE10-dist-out 8.9488 APE9-dist-in 3.98 None None None EM 2.6 999.0 999.0 K 301.0 292.0 0 28 28 0 [[4, 286]] 1.0 9qcx Homo sapiens CMGC_CDK2_HUMAN CMGC 6.6e-90 307.8 1.0 301.0 301.0 144 145 146 148 150 33 51 55 124 126 125 127.0 185 172 167 166 165 164 163 162 161 81 Cyclin-dependent kinase 2
CMGC CDK7 CDK7_HUMAN 9QCXJ P50613 9 346 346.0 No_ligand No_ligand Inactive DFGin 6.6963 16.0265 BLAminus -131.02, -177.03 59.81, 66.92 -86.78, 26.87 276.81, 73.59 -75.67, -10.97 in-out in 8.7931 Saltbr-out 3.9707 HRD-in -71.21, -46.31 66.3, 0.75 out-in-out SNCoio in-out ActLoopNT-in 2.7535 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_iooi APE10-dihe-na -103.75, 161.28 APE9-dihe-na -68.95, 168.1 APE8-dihe-in -56.3, 142.34 APE8-rot-out 173.25 APE67-dihe-in -65.83, -25.32 -64.61, -15.36 APE12-dist-in 10.4856 APE11-dist-out 5.5683 APE10-dist-out 9.089 APE9-dist-in 3.8595 None None None EM 2.6 999.0 999.0 J 391.0 309.0 0 28 28 0 [[12, 295]] 1.0 9qcx Homo sapiens CMGC_CDK7_HUMAN CMGC 2.4e-78 271.1 1.0 301.0 301.0 154 155 156 158 160 41 62 66 134 136 135 137.0 195 182 177 176 175 174 173 172 171 92 Cyclin-dependent kinase 7

PDB: 9QCX — 2 kinases

Total number of chains: 0
Active chains: 0
Total number of genes: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name