PDB: 9I9K — 2 kinases

Total number of chains: 2
Active chains: 0
Total number of genes: 2
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% 9I9KJ
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
CMGC CDK2 CDK2_HUMAN 9I9KK P24941 2 292 298.0 ADP:60301 ATPlike Inactive DFGin 7.3023 15.9065 BLAminus -142.34, -176.15 60.61, 65.17 -90.86, 48.23 288.67, 80.56 -88.9, -30.85 out-out out 10.4864 Saltbr-out 5.6503 HRD-in -65.4, -52.43 72.61, -10.3 out-in-out SNCoio in-out ActLoopNT-in 2.5583 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_iioo APE10-dihe-na -73.37, 146.13 APE9-dihe-na -115.04, 137.49 APE8-dihe-in -60.96, 144.59 APE8-rot-out 184.92 APE67-dihe-in -75.1, -11.28 -107.26, -12.43 APE12-dist-in 12.0105 APE11-dist-in 8.1866 APE10-dist-out 12.0491 APE9-dist-out 7.5485 None None None EM 2.4 999.0 999.0 K 301.0 276.0 15 28 28 0 [[4, 286]] 1.0 9i9k CMGC_CDK2_HUMAN CMGC 6.6e-90 307.8 1.0 301.0 301.0 144 145 146 148 150 33 51 55 124 126 125 127.0 185 172 167 166 165 164 163 162 161 81 Cyclin-dependent kinase 2
CMGC CDK7 CDK7_HUMAN 9I9KJ P50613 10 310 346.0 ADP:60401 ATPlike Inactive DFGin 6.8665 15.1598 BLAminus -144.56, -175.34 58.29, 64.88 -85.43, 20.68 280.65, 74.04 -68.51, -15.78 in-in in 8.4034 Saltbr-in 3.4231 HRD-in -66.35, -48.78 67.04, 4.57 in-in-out SNCiio in-out ActLoopNT-in 2.7011 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_iooi APE10-dihe-na -135.97, 162.75 APE9-dihe-na -69.89, 166.52 APE8-dihe-in -58.19, 147.77 APE8-rot-out 190.67 APE67-dihe-in -62.09, -25.1 -66.28, -24.83 APE12-dist-in 11.5433 APE11-dist-out 5.9477 APE10-dist-out 9.1593 APE9-dist-in 3.8908 None None None EM 2.4 999.0 999.0 J 391.0 301.0 0 28 28 0 [[12, 295]] 1.0 9i9k CMGC_CDK7_HUMAN CMGC 2.4e-78 271.1 1.0 301.0 301.0 154 155 156 158 160 41 62 66 134 136 135 137.0 195 182 177 176 175 174 173 172 171 92 Cyclin-dependent kinase 7

PDB: 9I9K — 2 kinases

Total number of chains: 2
Active chains: 0
Total number of genes: 2
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% 9I9KJ
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
CMGC CDK2 CDK2_HUMAN 9I9KK P24941 2 292 298.0 ADP:60301 ATPlike Inactive DFGin 7.3023 15.9065 BLAminus -142.34, -176.15 60.61, 65.17 -90.86, 48.23 288.67, 80.56 -88.9, -30.85 out-out out 10.4864 Saltbr-out 5.6503 HRD-in -65.4, -52.43 72.61, -10.3 out-in-out SNCoio in-out ActLoopNT-in 2.5583 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_iioo APE10-dihe-na -73.37, 146.13 APE9-dihe-na -115.04, 137.49 APE8-dihe-in -60.96, 144.59 APE8-rot-out 184.92 APE67-dihe-in -75.1, -11.28 -107.26, -12.43 APE12-dist-in 12.0105 APE11-dist-in 8.1866 APE10-dist-out 12.0491 APE9-dist-out 7.5485 None None None EM 2.4 999.0 999.0 K 301.0 276.0 15 28 28 0 [[4, 286]] 1.0 9i9k Homo sapiens CMGC_CDK2_HUMAN CMGC 6.6e-90 307.8 1.0 301.0 301.0 144 145 146 148 150 33 51 55 124 126 125 127.0 185 172 167 166 165 164 163 162 161 81 Cyclin-dependent kinase 2
CMGC CDK7 CDK7_HUMAN 9I9KJ P50613 10 310 346.0 ADP:60401 ATPlike Inactive DFGin 6.8665 15.1598 BLAminus -144.56, -175.34 58.29, 64.88 -85.43, 20.68 280.65, 74.04 -68.51, -15.78 in-in in 8.4034 Saltbr-in 3.4231 HRD-in -66.35, -48.78 67.04, 4.57 in-in-out SNCiio in-out ActLoopNT-in 2.7011 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_iooi APE10-dihe-na -135.97, 162.75 APE9-dihe-na -69.89, 166.52 APE8-dihe-in -58.19, 147.77 APE8-rot-out 190.67 APE67-dihe-in -62.09, -25.1 -66.28, -24.83 APE12-dist-in 11.5433 APE11-dist-out 5.9477 APE10-dist-out 9.1593 APE9-dist-in 3.8908 None None None EM 2.4 999.0 999.0 J 391.0 301.0 0 28 28 0 [[12, 295]] 1.0 9i9k Homo sapiens CMGC_CDK7_HUMAN CMGC 2.4e-78 271.1 1.0 301.0 301.0 154 155 156 158 160 41 62 66 134 136 135 137.0 195 182 177 176 175 174 173 172 171 92 Cyclin-dependent kinase 7

PDB: 9I9K — 2 kinases

Total number of chains: 0
Active chains: 0
Total number of genes: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name