PDB: 9I9I — 2 kinases

Total number of chains: 2
Active chains: 0
Total number of genes: 2
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% 9I9IJ
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
CMGC CDK11B CD11B_HUMAN 9I9IK P21127 440 740 795.0 ADP:60801 ATPlike Inactive DFGin 4.7633 14.1457 BLAminus -158.41, -152.11 58.37, 65.02 -86.96, 23.61 281.98, 74.01 -65.45, -34.44 in-in in 9.3484 Saltbr-in 3.0248 HRD-in -87.02, -49.1 60.47, 15.99 in-in-out SNCiio in-out ActLoopNT-in 2.8427 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_iiii APE10-dihe-na -140.14, 178.62 APE9-dihe-na 67.65, 142.84 APE8-dihe-in -66.76, 156.24 APE8-rot-out 57.56 APE67-dihe-in -70.3, -10.82 -63.46, -38.5 APE12-dist-in 13.2936 APE11-dist-in 11.3984 APE10-dist-in 6.5133 APE9-dist-in 3.2891 None TPO595 TPO595 EM 3.5 999.0 999.0 K 442.0 268.0 35 28 22 6 [[438, 723]] 1.0 9i9i CMGC_CDK11B_HUMAN CMGC 5.1e-79 271.6 1.0 301.0 301.0 579 580 581 583 585 467 485 489 559 561 560 562.0 620 607 602 601 600 599 598 597 596 517 Cyclin-dependent kinase 11B
CMGC CDK7 CDK7_HUMAN 9I9IJ P50613 12 310 346.0 ADP:60401 ATPlike Inactive DFGin 6.598 15.1475 BLAminus -154.26, -174.63 55.49, 63.23 -84.52, 21.08 280.13, 83.68 -62.16, -39.37 in-out in 8.6205 Saltbr-out 4.7244 HRD-in -68.87, -48.72 60.83, 9.92 out-in-out SNCoio in-out ActLoopNT-in 2.7723 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_iiii APE10-dihe-na -114.8, -59.65 APE9-dihe-na -71.54, 157.02 APE8-dihe-in -67.36, 161.57 APE8-rot-out 77.35 APE67-dihe-in -72.1, -35.43 -63.15, -31.03 APE12-dist-in 12.4211 APE11-dist-in 11.2397 APE10-dist-in 6.1345 APE9-dist-in 3.7163 None None None EM 3.5 999.0 999.0 J 391.0 294.0 5 28 28 0 [[12, 295]] 1.0 9i9i CMGC_CDK7_HUMAN CMGC 2.4e-78 271.1 1.0 301.0 301.0 154 155 156 158 160 41 62 66 134 136 135 137.0 195 182 177 176 175 174 173 172 171 92 Cyclin-dependent kinase 7

PDB: 9I9I — 2 kinases

Total number of chains: 2
Active chains: 0
Total number of genes: 2
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% 9I9IJ
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
CMGC CDK11B CD11B_HUMAN 9I9IK P21127 440 740 795.0 ADP:60801 ATPlike Inactive DFGin 4.7633 14.1457 BLAminus -158.41, -152.11 58.37, 65.02 -86.96, 23.61 281.98, 74.01 -65.45, -34.44 in-in in 9.3484 Saltbr-in 3.0248 HRD-in -87.02, -49.1 60.47, 15.99 in-in-out SNCiio in-out ActLoopNT-in 2.8427 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_iiii APE10-dihe-na -140.14, 178.62 APE9-dihe-na 67.65, 142.84 APE8-dihe-in -66.76, 156.24 APE8-rot-out 57.56 APE67-dihe-in -70.3, -10.82 -63.46, -38.5 APE12-dist-in 13.2936 APE11-dist-in 11.3984 APE10-dist-in 6.5133 APE9-dist-in 3.2891 None TPO595 TPO595 EM 3.5 999.0 999.0 K 442.0 268.0 35 28 22 6 [[438, 723]] 1.0 9i9i Homo sapiens CMGC_CDK11B_HUMAN CMGC 5.1e-79 271.6 1.0 301.0 301.0 579 580 581 583 585 467 485 489 559 561 560 562.0 620 607 602 601 600 599 598 597 596 517 Cyclin-dependent kinase 11B
CMGC CDK7 CDK7_HUMAN 9I9IJ P50613 12 310 346.0 ADP:60401 ATPlike Inactive DFGin 6.598 15.1475 BLAminus -154.26, -174.63 55.49, 63.23 -84.52, 21.08 280.13, 83.68 -62.16, -39.37 in-out in 8.6205 Saltbr-out 4.7244 HRD-in -68.87, -48.72 60.83, 9.92 out-in-out SNCoio in-out ActLoopNT-in 2.7723 ActLoopCT-out nonTYR APEdihe_aaioi APEdist_iiii APE10-dihe-na -114.8, -59.65 APE9-dihe-na -71.54, 157.02 APE8-dihe-in -67.36, 161.57 APE8-rot-out 77.35 APE67-dihe-in -72.1, -35.43 -63.15, -31.03 APE12-dist-in 12.4211 APE11-dist-in 11.2397 APE10-dist-in 6.1345 APE9-dist-in 3.7163 None None None EM 3.5 999.0 999.0 J 391.0 294.0 5 28 28 0 [[12, 295]] 1.0 9i9i Homo sapiens CMGC_CDK7_HUMAN CMGC 2.4e-78 271.1 1.0 301.0 301.0 154 155 156 158 160 41 62 66 134 136 135 137.0 195 182 177 176 175 174 173 172 171 92 Cyclin-dependent kinase 7

PDB: 9I9I — 2 kinases

Total number of chains: 0
Active chains: 0
Total number of genes: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name