PDB: 8V42 — CK1 VRK1_HUMAN

Total number of chains: 4
Active chains: 0
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 4 100.0% 8V42C
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
CK1 VRK1 VRK1_HUMAN 8V42A Q99986 20 341 396.0 No_ligand No_ligand Inactive DFGin 7.8532 14.8098 BLAminus -121.51, 175.02 72.65, 94.71 -118.54, 19.89 299.65, 83.97 -59.01, -29.73 in-in in 8.212 Saltbr-in 2.8647 HRD-in -83.99, -58.09 83.43, 6.42 in-in-out SNCiio in-out ActLoopNT-in 2.8693 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_iooi APE10-dihe-na -99.72, 1.75 APE9-dihe-na 88.26, -152.18 APE8-dihe-in -102.45, 129.29 APE8-rot-in 302.03 APE67-dihe-in -66.72, -27.45 -54.7, -46.25 APE12-dist-in 9.6903 APE11-dist-out 5.0587 APE10-dist-out 10.7556 APE9-dist-in 3.7247 K34A,K35A,E36A,E212A,K214A,E215A,E292A,K293A,K295A,K359A,K360A None None XRAY 2.3 0.199 0.231 A 364.0 312.0 10 35 35 0 [[37, 326]] 1.0 8v42 CK1_VRK1_HUMAN CK1 8.4e-105 355.8 1.0 261.0 261.0 196 197 198 200 202 71 83 87 174 176 175 177.0 243 231 226 225 224 223 222 221 220 132 Serine/threonine-protein kinase VRK1
CK1 VRK1 VRK1_HUMAN 8V42C Q99986 21 341 396.0 No_ligand No_ligand Inactive DFGin 7.8936 14.7927 BLAminus -123.1, 173.79 74.88, 93.95 -117.93, 23.53 298.38, 87.45 -66.4, -24.74 in-in in 8.15 Saltbr-in 3.0996 HRD-in -85.5, -57.27 80.14, 9.55 in-in-out SNCiio in-out ActLoopNT-in 2.7919 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_iooi APE10-dihe-na -121.06, 1.32 APE9-dihe-na 82.38, -165.01 APE8-dihe-in -98.07, 122.8 APE8-rot-in 302.61 APE67-dihe-in -67.57, -28.21 -55.26, -41.9 APE12-dist-in 9.2754 APE11-dist-out 4.8415 APE10-dist-out 10.392 APE9-dist-in 3.903 K34A,K35A,E36A,E212A,K214A,E215A,E292A,K293A,K295A,K359A,K360A None None XRAY 2.3 0.199 0.231 C 364.0 315.0 6 35 35 0 [[37, 326]] 1.0 8v42 CK1_VRK1_HUMAN CK1 8.4e-105 355.8 1.0 261.0 261.0 196 197 198 200 202 71 83 87 174 176 175 177.0 243 231 226 225 224 223 222 221 220 132 Serine/threonine-protein kinase VRK1
CK1 VRK1 VRK1_HUMAN 8V42B Q99986 23 341 396.0 YD9:401 Type1 Inactive DFGin 8.1499 14.5086 BLAminus -115.25, 173.81 70.74, 81.98 -96.57, 31.4 293.02, 83.98 -65.46, -31.88 in-in in 7.6834 Saltbr-in 2.9805 HRD-in -84.96, -54.37 82.65, 6.55 in-in-out SNCiio in-out ActLoopNT-in 2.9748 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_oiii APE10-dihe-na -56.02, 147.0 APE9-dihe-na 92.25, -161.77 APE8-dihe-in -93.24, 123.77 APE8-rot-in 302.73 APE67-dihe-in -69.68, -29.13 -58.11, -42.06 APE12-dist-out 14.9504 APE11-dist-in 13.2157 APE10-dist-in 7.6217 APE9-dist-in 4.1512 K34A,K35A,E36A,E212A,K214A,E215A,E292A,K293A,K295A,K359A,K360A None None XRAY 2.3 0.199 0.231 B 364.0 298.0 21 35 35 0 [[37, 326]] 1.0 8v42 CK1_VRK1_HUMAN CK1 8.4e-105 355.8 1.0 261.0 261.0 196 197 198 200 202 71 83 87 174 176 175 177.0 243 231 226 225 224 223 222 221 220 132 Serine/threonine-protein kinase VRK1
CK1 VRK1 VRK1_HUMAN 8V42D Q99986 22 341 396.0 YD9:503 Type1 Inactive DFGin 8.4271 14.5718 BLAminus -115.01, 173.66 70.13, 85.46 -98.79, 31.68 291.4, 80.12 -74.01, -24.17 in-in in 8.0337 Saltbr-in 2.8094 HRD-in -87.0, -55.77 90.86, -4.84 in-in-out SNCiio in-out ActLoopNT-in 2.9665 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_oiii APE10-dihe-na -53.59, 145.4 APE9-dihe-na 95.31, -166.28 APE8-dihe-in -89.68, 124.18 APE8-rot-in 303.57 APE67-dihe-in -70.5, -24.91 -57.98, -40.51 APE12-dist-out 14.7056 APE11-dist-in 13.0177 APE10-dist-in 7.3549 APE9-dist-in 4.1534 K34A,K35A,E36A,E212A,K214A,E215A,E292A,K293A,K295A,K359A,K360A None None XRAY 2.3 0.199 0.231 D 364.0 304.0 16 35 35 0 [[37, 326]] 1.0 8v42 CK1_VRK1_HUMAN CK1 8.4e-105 355.8 1.0 261.0 261.0 196 197 198 200 202 71 83 87 174 176 175 177.0 243 231 226 225 224 223 222 221 220 132 Serine/threonine-protein kinase VRK1

PDB: 8V42 — CK1 VRK1_HUMAN

Total number of chains: 4
Active chains: 0
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 4 100.0% 8V42C
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
CK1 VRK1 VRK1_HUMAN 8V42A Q99986 20 341 396.0 No_ligand No_ligand Inactive DFGin 7.8532 14.8098 BLAminus -121.51, 175.02 72.65, 94.71 -118.54, 19.89 299.65, 83.97 -59.01, -29.73 in-in in 8.212 Saltbr-in 2.8647 HRD-in -83.99, -58.09 83.43, 6.42 in-in-out SNCiio in-out ActLoopNT-in 2.8693 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_iooi APE10-dihe-na -99.72, 1.75 APE9-dihe-na 88.26, -152.18 APE8-dihe-in -102.45, 129.29 APE8-rot-in 302.03 APE67-dihe-in -66.72, -27.45 -54.7, -46.25 APE12-dist-in 9.6903 APE11-dist-out 5.0587 APE10-dist-out 10.7556 APE9-dist-in 3.7247 K34A,K35A,E36A,E212A,K214A,E215A,E292A,K293A,K295A,K359A,K360A None None XRAY 2.3 0.199 0.231 A 364.0 312.0 10 35 35 0 [[37, 326]] 1.0 8v42 Homo sapiens CK1_VRK1_HUMAN CK1 8.4e-105 355.8 1.0 261.0 261.0 196 197 198 200 202 71 83 87 174 176 175 177.0 243 231 226 225 224 223 222 221 220 132 Serine/threonine-protein kinase VRK1
CK1 VRK1 VRK1_HUMAN 8V42C Q99986 21 341 396.0 No_ligand No_ligand Inactive DFGin 7.8936 14.7927 BLAminus -123.1, 173.79 74.88, 93.95 -117.93, 23.53 298.38, 87.45 -66.4, -24.74 in-in in 8.15 Saltbr-in 3.0996 HRD-in -85.5, -57.27 80.14, 9.55 in-in-out SNCiio in-out ActLoopNT-in 2.7919 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_iooi APE10-dihe-na -121.06, 1.32 APE9-dihe-na 82.38, -165.01 APE8-dihe-in -98.07, 122.8 APE8-rot-in 302.61 APE67-dihe-in -67.57, -28.21 -55.26, -41.9 APE12-dist-in 9.2754 APE11-dist-out 4.8415 APE10-dist-out 10.392 APE9-dist-in 3.903 K34A,K35A,E36A,E212A,K214A,E215A,E292A,K293A,K295A,K359A,K360A None None XRAY 2.3 0.199 0.231 C 364.0 315.0 6 35 35 0 [[37, 326]] 1.0 8v42 Homo sapiens CK1_VRK1_HUMAN CK1 8.4e-105 355.8 1.0 261.0 261.0 196 197 198 200 202 71 83 87 174 176 175 177.0 243 231 226 225 224 223 222 221 220 132 Serine/threonine-protein kinase VRK1
CK1 VRK1 VRK1_HUMAN 8V42B Q99986 23 341 396.0 YD9:401 Type1 Inactive DFGin 8.1499 14.5086 BLAminus -115.25, 173.81 70.74, 81.98 -96.57, 31.4 293.02, 83.98 -65.46, -31.88 in-in in 7.6834 Saltbr-in 2.9805 HRD-in -84.96, -54.37 82.65, 6.55 in-in-out SNCiio in-out ActLoopNT-in 2.9748 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_oiii APE10-dihe-na -56.02, 147.0 APE9-dihe-na 92.25, -161.77 APE8-dihe-in -93.24, 123.77 APE8-rot-in 302.73 APE67-dihe-in -69.68, -29.13 -58.11, -42.06 APE12-dist-out 14.9504 APE11-dist-in 13.2157 APE10-dist-in 7.6217 APE9-dist-in 4.1512 K34A,K35A,E36A,E212A,K214A,E215A,E292A,K293A,K295A,K359A,K360A None None XRAY 2.3 0.199 0.231 B 364.0 298.0 21 35 35 0 [[37, 326]] 1.0 8v42 Homo sapiens CK1_VRK1_HUMAN CK1 8.4e-105 355.8 1.0 261.0 261.0 196 197 198 200 202 71 83 87 174 176 175 177.0 243 231 226 225 224 223 222 221 220 132 Serine/threonine-protein kinase VRK1
CK1 VRK1 VRK1_HUMAN 8V42D Q99986 22 341 396.0 YD9:503 Type1 Inactive DFGin 8.4271 14.5718 BLAminus -115.01, 173.66 70.13, 85.46 -98.79, 31.68 291.4, 80.12 -74.01, -24.17 in-in in 8.0337 Saltbr-in 2.8094 HRD-in -87.0, -55.77 90.86, -4.84 in-in-out SNCiio in-out ActLoopNT-in 2.9665 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_oiii APE10-dihe-na -53.59, 145.4 APE9-dihe-na 95.31, -166.28 APE8-dihe-in -89.68, 124.18 APE8-rot-in 303.57 APE67-dihe-in -70.5, -24.91 -57.98, -40.51 APE12-dist-out 14.7056 APE11-dist-in 13.0177 APE10-dist-in 7.3549 APE9-dist-in 4.1534 K34A,K35A,E36A,E212A,K214A,E215A,E292A,K293A,K295A,K359A,K360A None None XRAY 2.3 0.199 0.231 D 364.0 304.0 16 35 35 0 [[37, 326]] 1.0 8v42 Homo sapiens CK1_VRK1_HUMAN CK1 8.4e-105 355.8 1.0 261.0 261.0 196 197 198 200 202 71 83 87 174 176 175 177.0 243 231 226 225 224 223 222 221 220 132 Serine/threonine-protein kinase VRK1

PDB: 8V42 — CK1 VRK1_HUMAN

Total number of chains: 0
Active chains: 0
Total number of genes: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name