PDB: 8PYR — CMGC CDK7_HUMAN

Total number of chains: 2
Active chains: 0
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
None None 2 100.0% 8PYRA
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
CMGC CDK7 CDK7_HUMAN 8PYRA P50613 46 311 346.0 No_ligand No_ligand Inactive None 6.5429 999.0 None -122.94, -68.2 -80.73, 102.32 -98.18, 22.66 281.33, 69.82 -69.91, -16.7 none-none none 999.0 Saltbr-none 999.0 HRD-in -77.35, -47.6 64.82, 19.19 none-in-in SNCnii in-in ActLoopNT-in 2.8299 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -123.11, 167.33 APE9-dihe-na 68.76, 128.67 APE8-dihe-in -52.64, 137.07 APE8-rot-in 303.34 APE67-dihe-in -60.29, -22.26 -49.6, -45.66 APE12-dist-in 12.8695 APE11-dist-in 10.8601 APE10-dist-in 6.3576 APE9-dist-in 3.203 None SEP164,TPO170 SEP164,TPO170 XRAY 2.15 0.223 0.241 A 346.0 266.0 34 28 28 0 [[12, 295]] 1.0 8pyr CMGC_CDK7_HUMAN CMGC 1.6e-78 271.8 1.0 301.0 301.0 154 155 156 158 160 41 62 66 134 136 135 137.0 195 182 177 176 175 174 173 172 171 92 Cyclin-dependent kinase 7
CMGC CDK7 CDK7_HUMAN 8PYRE P50613 51 310 346.0 No_ligand No_ligand Inactive None 6.5118 999.0 None -129.77, -168.82 32.02, 94.76 -100.83, 24.77 279.75, 68.97 -67.87, -15.59 none-none none 999.0 Saltbr-none 999.0 HRD-in -77.49, -47.54 64.99, 19.99 none-in-in SNCnii in-in ActLoopNT-in 2.8158 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -122.08, 166.13 APE9-dihe-na 67.89, 131.66 APE8-dihe-in -53.3, 135.79 APE8-rot-in 302.92 APE67-dihe-in -59.26, -22.23 -50.11, -44.65 APE12-dist-in 12.8711 APE11-dist-in 10.7517 APE10-dist-in 6.3624 APE9-dist-in 3.1483 None SEP164,TPO170 SEP164,TPO170 XRAY 2.15 0.223 0.241 E 346.0 260.0 39 28 28 0 [[12, 295]] 1.0 8pyr CMGC_CDK7_HUMAN CMGC 1.6e-78 271.8 1.0 301.0 301.0 154 155 156 158 160 41 62 66 134 136 135 137.0 195 182 177 176 175 174 173 172 171 92 Cyclin-dependent kinase 7

PDB: 8PYR — CMGC CDK7_HUMAN

Total number of chains: 2
Active chains: 0
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
None None 2 100.0% 8PYRA
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
CMGC CDK7 CDK7_HUMAN 8PYRA P50613 46 311 346.0 No_ligand No_ligand Inactive None 6.5429 999.0 None -122.94, -68.2 -80.73, 102.32 -98.18, 22.66 281.33, 69.82 -69.91, -16.7 none-none none 999.0 Saltbr-none 999.0 HRD-in -77.35, -47.6 64.82, 19.19 none-in-in SNCnii in-in ActLoopNT-in 2.8299 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -123.11, 167.33 APE9-dihe-na 68.76, 128.67 APE8-dihe-in -52.64, 137.07 APE8-rot-in 303.34 APE67-dihe-in -60.29, -22.26 -49.6, -45.66 APE12-dist-in 12.8695 APE11-dist-in 10.8601 APE10-dist-in 6.3576 APE9-dist-in 3.203 None SEP164,TPO170 SEP164,TPO170 XRAY 2.15 0.223 0.241 A 346.0 266.0 34 28 28 0 [[12, 295]] 1.0 8pyr Homo sapiens CMGC_CDK7_HUMAN CMGC 1.6e-78 271.8 1.0 301.0 301.0 154 155 156 158 160 41 62 66 134 136 135 137.0 195 182 177 176 175 174 173 172 171 92 Cyclin-dependent kinase 7
CMGC CDK7 CDK7_HUMAN 8PYRE P50613 51 310 346.0 No_ligand No_ligand Inactive None 6.5118 999.0 None -129.77, -168.82 32.02, 94.76 -100.83, 24.77 279.75, 68.97 -67.87, -15.59 none-none none 999.0 Saltbr-none 999.0 HRD-in -77.49, -47.54 64.99, 19.99 none-in-in SNCnii in-in ActLoopNT-in 2.8158 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -122.08, 166.13 APE9-dihe-na 67.89, 131.66 APE8-dihe-in -53.3, 135.79 APE8-rot-in 302.92 APE67-dihe-in -59.26, -22.23 -50.11, -44.65 APE12-dist-in 12.8711 APE11-dist-in 10.7517 APE10-dist-in 6.3624 APE9-dist-in 3.1483 None SEP164,TPO170 SEP164,TPO170 XRAY 2.15 0.223 0.241 E 346.0 260.0 39 28 28 0 [[12, 295]] 1.0 8pyr Homo sapiens CMGC_CDK7_HUMAN CMGC 1.6e-78 271.8 1.0 301.0 301.0 154 155 156 158 160 41 62 66 134 136 135 137.0 195 182 177 176 175 174 173 172 171 92 Cyclin-dependent kinase 7

PDB: 8PYR — CMGC CDK7_HUMAN

Total number of chains: 0
Active chains: 0
Total number of genes: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name