PDB: 6BU6 — CK1 VRK1_HUMAN

Total number of chains: 4
Active chains: 0
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 4 100.0% 6BU6A
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
CK1 VRK1 VRK1_HUMAN 6BU6C Q99986 21 341 396.0 No_ligand No_ligand Inactive DFGin 7.9438 14.9691 BLAminus -117.18, 175.95 73.51, 91.5 -111.82, 15.91 297.66, 83.38 -64.79, -27.67 in-in in 8.1731 Saltbr-in 2.7234 HRD-in -87.76, -48.87 78.25, -0.92 in-in-out SNCiio in-out ActLoopNT-in 2.8525 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_iooi APE10-dihe-na -109.17, 2.29 APE9-dihe-na 87.9, -161.95 APE8-dihe-in -100.19, 119.95 APE8-rot-in 298.15 APE67-dihe-in -68.79, -25.2 -52.88, -41.93 APE12-dist-in 9.0912 APE11-dist-out 5.53 APE10-dist-out 10.9453 APE9-dist-in 3.8473 K34A,K35A,E36A,E212A,K214A,E215A,E292A,K293A,K295A,K359A,K360A None None XRAY 1.8 0.186 0.212 C 364.0 315.0 6 35 35 0 [[37, 326]] 1.0 6bu6 CK1_VRK1_HUMAN CK1 8.4e-105 355.8 1.0 261.0 261.0 196 197 198 200 202 71 83 87 174 176 175 177.0 243 231 226 225 224 223 222 221 220 132 Serine/threonine-protein kinase VRK1
CK1 VRK1 VRK1_HUMAN 6BU6B Q99986 23 341 396.0 E8V:401 Type1 Inactive DFGin 8.2684 14.6212 BLAminus -116.17, 174.71 71.73, 90.61 -112.18, 20.9 296.52, 84.84 -64.88, -27.0 in-in in 8.0883 Saltbr-in 2.7424 HRD-in -88.46, -49.62 77.08, 1.91 in-in-out SNCiio in-out ActLoopNT-in 2.8689 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_oooi APE10-dihe-na -61.72, 158.34 APE9-dihe-na 92.24, -163.66 APE8-dihe-in -96.91, 119.69 APE8-rot-in 300.47 APE67-dihe-in -70.15, -24.73 -54.45, -40.48 APE12-dist-out 15.5234 APE11-dist-out 14.1779 APE10-dist-out 8.4217 APE9-dist-in 3.9974 K34A,K35A,E36A,E212A,K214A,E215A,E292A,K293A,K295A,K359A,K360A None None XRAY 1.8 0.186 0.212 B 364.0 307.0 12 35 35 0 [[37, 326]] 1.0 6bu6 CK1_VRK1_HUMAN CK1 8.4e-105 355.8 1.0 261.0 261.0 196 197 198 200 202 71 83 87 174 176 175 177.0 243 231 226 225 224 223 222 221 220 132 Serine/threonine-protein kinase VRK1
CK1 VRK1 VRK1_HUMAN 6BU6D Q99986 22 341 396.0 E8V:401 Type1 Inactive DFGin 8.1897 14.4908 BLAminus -117.45, 173.99 70.17, 88.84 -106.05, 22.0 293.29, 84.87 -55.23, -29.8 in-in in 8.1262 Saltbr-in 2.7653 HRD-in -88.95, -48.69 76.34, 2.59 in-in-out SNCiio in-out ActLoopNT-in 2.8659 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_oiii APE10-dihe-na -61.65, 158.02 APE9-dihe-na 93.89, -164.33 APE8-dihe-in -97.16, 119.8 APE8-rot-in 299.52 APE67-dihe-in -70.9, -24.87 -53.15, -41.73 APE12-dist-out 15.0709 APE11-dist-in 13.6497 APE10-dist-in 7.8794 APE9-dist-in 4.0401 K34A,K35A,E36A,E212A,K214A,E215A,E292A,K293A,K295A,K359A,K360A None None XRAY 1.8 0.186 0.212 D 364.0 318.0 2 35 35 0 [[37, 326]] 1.0 6bu6 CK1_VRK1_HUMAN CK1 8.4e-105 355.8 1.0 261.0 261.0 196 197 198 200 202 71 83 87 174 176 175 177.0 243 231 226 225 224 223 222 221 220 132 Serine/threonine-protein kinase VRK1
CK1 VRK1 VRK1_HUMAN 6BU6A Q99986 20 341 396.0 E8V:401 Type1.5_Back Inactive DFGin 7.9875 14.8256 BLAminus -117.44, 175.64 74.32, 90.34 -110.78, 17.1 297.15, 83.38 -64.18, -29.59 in-in in 7.9681 Saltbr-in 2.7308 HRD-in -87.08, -49.4 78.88, -0.84 in-in-out SNCiio in-out ActLoopNT-in 2.8495 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_iooi APE10-dihe-na -106.87, 0.03 APE9-dihe-na 89.05, -161.62 APE8-dihe-in -100.82, 121.19 APE8-rot-in 297.64 APE67-dihe-in -68.23, -25.69 -52.81, -42.42 APE12-dist-in 9.1734 APE11-dist-out 5.5631 APE10-dist-out 10.9426 APE9-dist-in 3.8586 K34A,K35A,E36A,E212A,K214A,E215A,E292A,K293A,K295A,K359A,K360A None None XRAY 1.8 0.186 0.212 A 364.0 322.0 0 35 35 0 [[37, 326]] 1.0 6bu6 CK1_VRK1_HUMAN CK1 8.4e-105 355.8 1.0 261.0 261.0 196 197 198 200 202 71 83 87 174 176 175 177.0 243 231 226 225 224 223 222 221 220 132 Serine/threonine-protein kinase VRK1

PDB: 6BU6 — CK1 VRK1_HUMAN

Total number of chains: 4
Active chains: 0
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 4 100.0% 6BU6A
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
CK1 VRK1 VRK1_HUMAN 6BU6C Q99986 21 341 396.0 No_ligand No_ligand Inactive DFGin 7.9438 14.9691 BLAminus -117.18, 175.95 73.51, 91.5 -111.82, 15.91 297.66, 83.38 -64.79, -27.67 in-in in 8.1731 Saltbr-in 2.7234 HRD-in -87.76, -48.87 78.25, -0.92 in-in-out SNCiio in-out ActLoopNT-in 2.8525 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_iooi APE10-dihe-na -109.17, 2.29 APE9-dihe-na 87.9, -161.95 APE8-dihe-in -100.19, 119.95 APE8-rot-in 298.15 APE67-dihe-in -68.79, -25.2 -52.88, -41.93 APE12-dist-in 9.0912 APE11-dist-out 5.53 APE10-dist-out 10.9453 APE9-dist-in 3.8473 K34A,K35A,E36A,E212A,K214A,E215A,E292A,K293A,K295A,K359A,K360A None None XRAY 1.8 0.186 0.212 C 364.0 315.0 6 35 35 0 [[37, 326]] 1.0 6bu6 Homo sapiens CK1_VRK1_HUMAN CK1 8.4e-105 355.8 1.0 261.0 261.0 196 197 198 200 202 71 83 87 174 176 175 177.0 243 231 226 225 224 223 222 221 220 132 Serine/threonine-protein kinase VRK1
CK1 VRK1 VRK1_HUMAN 6BU6B Q99986 23 341 396.0 E8V:401 Type1 Inactive DFGin 8.2684 14.6212 BLAminus -116.17, 174.71 71.73, 90.61 -112.18, 20.9 296.52, 84.84 -64.88, -27.0 in-in in 8.0883 Saltbr-in 2.7424 HRD-in -88.46, -49.62 77.08, 1.91 in-in-out SNCiio in-out ActLoopNT-in 2.8689 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_oooi APE10-dihe-na -61.72, 158.34 APE9-dihe-na 92.24, -163.66 APE8-dihe-in -96.91, 119.69 APE8-rot-in 300.47 APE67-dihe-in -70.15, -24.73 -54.45, -40.48 APE12-dist-out 15.5234 APE11-dist-out 14.1779 APE10-dist-out 8.4217 APE9-dist-in 3.9974 K34A,K35A,E36A,E212A,K214A,E215A,E292A,K293A,K295A,K359A,K360A None None XRAY 1.8 0.186 0.212 B 364.0 307.0 12 35 35 0 [[37, 326]] 1.0 6bu6 Homo sapiens CK1_VRK1_HUMAN CK1 8.4e-105 355.8 1.0 261.0 261.0 196 197 198 200 202 71 83 87 174 176 175 177.0 243 231 226 225 224 223 222 221 220 132 Serine/threonine-protein kinase VRK1
CK1 VRK1 VRK1_HUMAN 6BU6D Q99986 22 341 396.0 E8V:401 Type1 Inactive DFGin 8.1897 14.4908 BLAminus -117.45, 173.99 70.17, 88.84 -106.05, 22.0 293.29, 84.87 -55.23, -29.8 in-in in 8.1262 Saltbr-in 2.7653 HRD-in -88.95, -48.69 76.34, 2.59 in-in-out SNCiio in-out ActLoopNT-in 2.8659 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_oiii APE10-dihe-na -61.65, 158.02 APE9-dihe-na 93.89, -164.33 APE8-dihe-in -97.16, 119.8 APE8-rot-in 299.52 APE67-dihe-in -70.9, -24.87 -53.15, -41.73 APE12-dist-out 15.0709 APE11-dist-in 13.6497 APE10-dist-in 7.8794 APE9-dist-in 4.0401 K34A,K35A,E36A,E212A,K214A,E215A,E292A,K293A,K295A,K359A,K360A None None XRAY 1.8 0.186 0.212 D 364.0 318.0 2 35 35 0 [[37, 326]] 1.0 6bu6 Homo sapiens CK1_VRK1_HUMAN CK1 8.4e-105 355.8 1.0 261.0 261.0 196 197 198 200 202 71 83 87 174 176 175 177.0 243 231 226 225 224 223 222 221 220 132 Serine/threonine-protein kinase VRK1
CK1 VRK1 VRK1_HUMAN 6BU6A Q99986 20 341 396.0 E8V:401 Type1.5_Back Inactive DFGin 7.9875 14.8256 BLAminus -117.44, 175.64 74.32, 90.34 -110.78, 17.1 297.15, 83.38 -64.18, -29.59 in-in in 7.9681 Saltbr-in 2.7308 HRD-in -87.08, -49.4 78.88, -0.84 in-in-out SNCiio in-out ActLoopNT-in 2.8495 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_iooi APE10-dihe-na -106.87, 0.03 APE9-dihe-na 89.05, -161.62 APE8-dihe-in -100.82, 121.19 APE8-rot-in 297.64 APE67-dihe-in -68.23, -25.69 -52.81, -42.42 APE12-dist-in 9.1734 APE11-dist-out 5.5631 APE10-dist-out 10.9426 APE9-dist-in 3.8586 K34A,K35A,E36A,E212A,K214A,E215A,E292A,K293A,K295A,K359A,K360A None None XRAY 1.8 0.186 0.212 A 364.0 322.0 0 35 35 0 [[37, 326]] 1.0 6bu6 Homo sapiens CK1_VRK1_HUMAN CK1 8.4e-105 355.8 1.0 261.0 261.0 196 197 198 200 202 71 83 87 174 176 175 177.0 243 231 226 225 224 223 222 221 220 132 Serine/threonine-protein kinase VRK1

PDB: 6BU6 — CK1 VRK1_HUMAN

Total number of chains: 0
Active chains: 0
Total number of genes: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name