PDB: 5MJA — TYR EPHB1_HUMAN

Total number of chains: 2
Active chains: 1
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% 5MJAB
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
TYR EPHB1 EPHB1_HUMAN 5MJAB P54762 609 890 984.0 7O3:901 Type1 Active DFGin 6.083 14.0535 BLAminus -141.24, -171.2 58.22, 72.67 -91.84, 11.93 298.24, 99.38 -53.11, -46.2 in-in in 7.8716 Saltbr-in 2.8065 HRD-in -76.6, -50.2 73.12, -6.86 in-in-in SNCiii in-in ActLoopNT-in 2.856 ActLoopCT-in TYR APEdihe_iiiai APEdist_aaai APE10-dihe-in -71.9, 136.79 APE9-dihe-in -131.04, 157.79 APE8-dihe-in -83.23, 87.47 APE8-rot-na 26.22 APE67-dihe-in -75.23, -7.99 -41.53, -51.14 APE12-dist-na 15.035 APE11-dist-na 11.2696 APE10-dist-na 11.1128 APE9-dist-in 6.3542 None PTR647,PTR778 PTR647,PTR778 XRAY 2.14 0.202 0.236 B 305.0 276.0 6 33 27 6 [[619, 880]] 1.0 5mja TYR_EPHB1_HUMAN TYR 5.3e-109 369.5 2.0 261.0 260.0 761 762 763 765 767 651 668 672 741 743 742 744.0 806 794 789 788 787 786 785 784 783 698 Ephrin type-B receptor 1
TYR EPHB1 EPHB1_HUMAN 5MJAA P54762 609 892 984.0 7O3:901 Type1.5_Back None DFGin 5.8801 13.9025 BLAminus -139.99, -175.99 56.55, 73.99 -90.49, 10.93 298.25, 99.95 -50.92, -47.24 in-in in 7.8806 Saltbr-in 2.7929 HRD-in -76.83, -50.44 72.7, -6.85 in-in-none SNCiin in-none ActLoopNT-in 2.8638 ActLoopCT-none TYR APEdihe_nnnai APEdist_aaan APE10-dihe-none 999.0, 999.0 APE9-dihe-none 999.0, 999.0 APE8-dihe-none 999.0, 37.53 APE8-rot-na 25.39 APE67-dihe-in -70.7, -7.58 -41.98, -56.11 APE12-dist-na 999.0 APE11-dist-na 999.0 APE10-dist-na 999.0 APE9-dist-none 999.0 None PTR647,PTR778 PTR647,PTR778 XRAY 2.14 0.202 0.236 A 305.0 273.0 11 33 22 11 [[619, 880]] 1.0 5mja TYR_EPHB1_HUMAN TYR 5.3e-109 369.5 2.0 261.0 260.0 761 762 763 765 767 651 668 672 741 743 742 744.0 806 794 789 788 787 786 785 784 783 698 Ephrin type-B receptor 1

PDB: 5MJA — TYR EPHB1_HUMAN

Total number of chains: 2
Active chains: 1
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% 5MJAB
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
TYR EPHB1 EPHB1_HUMAN 5MJAB P54762 609 890 984.0 7O3:901 Type1 Active DFGin 6.083 14.0535 BLAminus -141.24, -171.2 58.22, 72.67 -91.84, 11.93 298.24, 99.38 -53.11, -46.2 in-in in 7.8716 Saltbr-in 2.8065 HRD-in -76.6, -50.2 73.12, -6.86 in-in-in SNCiii in-in ActLoopNT-in 2.856 ActLoopCT-in TYR APEdihe_iiiai APEdist_aaai APE10-dihe-in -71.9, 136.79 APE9-dihe-in -131.04, 157.79 APE8-dihe-in -83.23, 87.47 APE8-rot-na 26.22 APE67-dihe-in -75.23, -7.99 -41.53, -51.14 APE12-dist-na 15.035 APE11-dist-na 11.2696 APE10-dist-na 11.1128 APE9-dist-in 6.3542 None PTR647,PTR778 PTR647,PTR778 XRAY 2.14 0.202 0.236 B 305.0 276.0 6 33 27 6 [[619, 880]] 1.0 5mja Homo sapiens TYR_EPHB1_HUMAN TYR 5.3e-109 369.5 2.0 261.0 260.0 761 762 763 765 767 651 668 672 741 743 742 744.0 806 794 789 788 787 786 785 784 783 698 Ephrin type-B receptor 1
TYR EPHB1 EPHB1_HUMAN 5MJAA P54762 609 892 984.0 7O3:901 Type1.5_Back None DFGin 5.8801 13.9025 BLAminus -139.99, -175.99 56.55, 73.99 -90.49, 10.93 298.25, 99.95 -50.92, -47.24 in-in in 7.8806 Saltbr-in 2.7929 HRD-in -76.83, -50.44 72.7, -6.85 in-in-none SNCiin in-none ActLoopNT-in 2.8638 ActLoopCT-none TYR APEdihe_nnnai APEdist_aaan APE10-dihe-none 999.0, 999.0 APE9-dihe-none 999.0, 999.0 APE8-dihe-none 999.0, 37.53 APE8-rot-na 25.39 APE67-dihe-in -70.7, -7.58 -41.98, -56.11 APE12-dist-na 999.0 APE11-dist-na 999.0 APE10-dist-na 999.0 APE9-dist-none 999.0 None PTR647,PTR778 PTR647,PTR778 XRAY 2.14 0.202 0.236 A 305.0 273.0 11 33 22 11 [[619, 880]] 1.0 5mja Homo sapiens TYR_EPHB1_HUMAN TYR 5.3e-109 369.5 2.0 261.0 260.0 761 762 763 765 767 651 668 672 741 743 742 744.0 806 794 789 788 787 786 785 784 783 698 Ephrin type-B receptor 1

PDB: 5MJA — TYR EPHB1_HUMAN

Total number of chains: 0
Active chains: 0
Total number of genes: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name