PDB: 4PDS — CAMK RAD53_YEAST

Total number of chains: 0
Active chains: 0
Total number of genes: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name

PDB: 4PDS — CAMK RAD53_YEAST

Total number of chains: 2
Active chains: 0
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% 4PDSA
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
CAMK RAD53 RAD53_YEAST 4PDSA P22216 191 490 821.0 ANP:601 ATPlike None DFGin 6.8268 15.321 BLAminus -118.08, -171.61 59.64, 71.79 -99.48, 20.29 283.31, 64.09 -58.2, -44.36 in-none in 9.0663 Saltbr-none 999.0 HRD-in -71.09, -47.1 62.14, 17.47 none-in-none SNCnin in-none ActLoopNT-in 3.117 ActLoopCT-none nonTYR APEdihe_aannn APEdist_nnnn APE10-dihe-na 999.0, 999.0 APE9-dihe-na 999.0, 999.0 APE8-dihe-none 999.0, 999.0 APE8-rot-none 999.0 APE67-dihe-none 999.0, -34.5 999.0, 999.0 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-none 999.0 APE9-dist-none 999.0 A225S,D339A None None XRAY 2.9 0.229 0.263 A 347.0 249.0 48 27 13 14 [[198, 466]] 1.0 4pds Saccharomyces cerevisiae CAMK_RAD53_YEAST CAMK 1e-76 264.0 3.0 256.0 254.0 338 339 340 342 344 227 244 248 316 318 317 319.0 390 365 360 359 358 357 356 355 354 274 Serine/threonine-protein kinase RAD53
CAMK RAD53 RAD53_YEAST 4PDSB P22216 191 494 821.0 ANP:601 ATPlike Inactive DFGin 6.7183 15.148 BLAminus -117.97, -170.55 58.98, 70.83 -99.5, 20.74 286.63, 66.01 -58.38, -47.1 in-none in 9.1835 Saltbr-none 999.0 HRD-in -70.11, -46.34 63.04, 16.89 none-in-out SNCnio in-out ActLoopNT-in 2.9807 ActLoopCT-out nonTYR APEdihe_aanoi APEdist_nnnn APE10-dihe-na 999.0, 999.0 APE9-dihe-na 999.0, 999.0 APE8-dihe-none 999.0, 171.9 APE8-rot-out 171.12 APE67-dihe-in -69.32, -29.11 -73.88, 11.81 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-none 999.0 APE9-dist-none 999.0 A225S,D339A None None XRAY 2.9 0.229 0.263 B 347.0 248.0 52 27 15 12 [[198, 466]] 1.0 4pds Saccharomyces cerevisiae CAMK_RAD53_YEAST CAMK 1e-76 264.0 3.0 256.0 254.0 338 339 340 342 344 227 244 248 316 318 317 319.0 390 365 360 359 358 357 356 355 354 274 Serine/threonine-protein kinase RAD53

PDB: 4PDS — CAMK RAD53_YEAST

Total number of chains: 2
Active chains: 0
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% 4PDSA
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
CAMK RAD53 RAD53_YEAST 4PDSA P22216 191 490 821.0 ANP:601 ATPlike None DFGin 6.8268 15.321 BLAminus -118.08, -171.61 59.64, 71.79 -99.48, 20.29 283.31, 64.09 -58.2, -44.36 in-none in 9.0663 Saltbr-none 999.0 HRD-in -71.09, -47.1 62.14, 17.47 none-in-none SNCnin in-none ActLoopNT-in 3.117 ActLoopCT-none nonTYR APEdihe_aannn APEdist_nnnn APE10-dihe-na 999.0, 999.0 APE9-dihe-na 999.0, 999.0 APE8-dihe-none 999.0, 999.0 APE8-rot-none 999.0 APE67-dihe-none 999.0, -34.5 999.0, 999.0 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-none 999.0 APE9-dist-none 999.0 A225S,D339A None None XRAY 2.9 0.229 0.263 A 347.0 249.0 48 27 13 14 [[198, 466]] 1.0 4pds Saccharomyces cerevisiae CAMK_RAD53_YEAST CAMK 1e-76 264.0 3.0 256.0 254.0 338 339 340 342 344 227 244 248 316 318 317 319.0 390 365 360 359 358 357 356 355 354 274 Serine/threonine-protein kinase RAD53
CAMK RAD53 RAD53_YEAST 4PDSB P22216 191 494 821.0 ANP:601 ATPlike Inactive DFGin 6.7183 15.148 BLAminus -117.97, -170.55 58.98, 70.83 -99.5, 20.74 286.63, 66.01 -58.38, -47.1 in-none in 9.1835 Saltbr-none 999.0 HRD-in -70.11, -46.34 63.04, 16.89 none-in-out SNCnio in-out ActLoopNT-in 2.9807 ActLoopCT-out nonTYR APEdihe_aanoi APEdist_nnnn APE10-dihe-na 999.0, 999.0 APE9-dihe-na 999.0, 999.0 APE8-dihe-none 999.0, 171.9 APE8-rot-out 171.12 APE67-dihe-in -69.32, -29.11 -73.88, 11.81 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-none 999.0 APE9-dist-none 999.0 A225S,D339A None None XRAY 2.9 0.229 0.263 B 347.0 248.0 52 27 15 12 [[198, 466]] 1.0 4pds Saccharomyces cerevisiae CAMK_RAD53_YEAST CAMK 1e-76 264.0 3.0 256.0 254.0 338 339 340 342 344 227 244 248 316 318 317 319.0 390 365 360 359 358 357 356 355 354 274 Serine/threonine-protein kinase RAD53