PDB: 4PDP — CAMK RAD53_YEAST

Total number of chains: 0
Active chains: 0
Total number of genes: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name

PDB: 4PDP — CAMK RAD53_YEAST

Total number of chains: 2
Active chains: 0
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% 4PDPB
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
CAMK RAD53 RAD53_YEAST 4PDPA P22216 191 494 821.0 No_ligand No_ligand Inactive DFGin 6.959 15.2453 BLAminus -137.2, -171.48 55.95, 81.93 -106.42, 20.22 284.74, 75.23 -61.56, -27.09 in-in in 9.6388 Saltbr-in 3.2663 HRD-in -80.67, -42.76 65.61, 12.58 in-in-out SNCiio in-out ActLoopNT-in 2.9913 ActLoopCT-out nonTYR APEdihe_aanoi APEdist_nnnn APE10-dihe-na 999.0, 999.0 APE9-dihe-na 999.0, 999.0 APE8-dihe-none 999.0, -178.44 APE8-rot-out 178.03 APE67-dihe-in -65.18, -32.22 -80.54, -7.05 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-none 999.0 APE9-dist-none 999.0 A225S,D339A None None XRAY 2.591 0.23 0.261 A 347.0 261.0 39 27 16 11 [[198, 466]] 1.0 4pdp Saccharomyces cerevisiae CAMK_RAD53_YEAST CAMK 1e-76 264.0 3.0 256.0 254.0 338 339 340 342 344 227 244 248 316 318 317 319.0 390 365 360 359 358 357 356 355 354 274 Serine/threonine-protein kinase RAD53
CAMK RAD53 RAD53_YEAST 4PDPB P22216 191 496 821.0 No_ligand No_ligand Inactive DFGin 7.1126 15.3677 BLAminus -139.84, -172.69 58.87, 75.86 -102.64, 23.96 286.29, 74.84 -62.92, -28.37 in-in in 9.5519 Saltbr-in 3.0692 HRD-in -86.14, -45.28 62.54, 22.57 in-in-out SNCiio in-out ActLoopNT-in 3.2053 ActLoopCT-out nonTYR APEdihe_aanoi APEdist_nnnn APE10-dihe-na 999.0, 999.0 APE9-dihe-na 999.0, 999.0 APE8-dihe-none 999.0, -176.92 APE8-rot-out 179.61 APE67-dihe-in -60.17, -32.19 -79.37, -19.94 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-none 999.0 APE9-dist-none 999.0 A225S,D339A None None XRAY 2.591 0.23 0.261 B 347.0 265.0 38 27 16 11 [[198, 466]] 1.0 4pdp Saccharomyces cerevisiae CAMK_RAD53_YEAST CAMK 1e-76 264.0 3.0 256.0 254.0 338 339 340 342 344 227 244 248 316 318 317 319.0 390 365 360 359 358 357 356 355 354 274 Serine/threonine-protein kinase RAD53

PDB: 4PDP — CAMK RAD53_YEAST

Total number of chains: 2
Active chains: 0
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% 4PDPB
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
CAMK RAD53 RAD53_YEAST 4PDPA P22216 191 494 821.0 No_ligand No_ligand Inactive DFGin 6.959 15.2453 BLAminus -137.2, -171.48 55.95, 81.93 -106.42, 20.22 284.74, 75.23 -61.56, -27.09 in-in in 9.6388 Saltbr-in 3.2663 HRD-in -80.67, -42.76 65.61, 12.58 in-in-out SNCiio in-out ActLoopNT-in 2.9913 ActLoopCT-out nonTYR APEdihe_aanoi APEdist_nnnn APE10-dihe-na 999.0, 999.0 APE9-dihe-na 999.0, 999.0 APE8-dihe-none 999.0, -178.44 APE8-rot-out 178.03 APE67-dihe-in -65.18, -32.22 -80.54, -7.05 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-none 999.0 APE9-dist-none 999.0 A225S,D339A None None XRAY 2.591 0.23 0.261 A 347.0 261.0 39 27 16 11 [[198, 466]] 1.0 4pdp Saccharomyces cerevisiae CAMK_RAD53_YEAST CAMK 1e-76 264.0 3.0 256.0 254.0 338 339 340 342 344 227 244 248 316 318 317 319.0 390 365 360 359 358 357 356 355 354 274 Serine/threonine-protein kinase RAD53
CAMK RAD53 RAD53_YEAST 4PDPB P22216 191 496 821.0 No_ligand No_ligand Inactive DFGin 7.1126 15.3677 BLAminus -139.84, -172.69 58.87, 75.86 -102.64, 23.96 286.29, 74.84 -62.92, -28.37 in-in in 9.5519 Saltbr-in 3.0692 HRD-in -86.14, -45.28 62.54, 22.57 in-in-out SNCiio in-out ActLoopNT-in 3.2053 ActLoopCT-out nonTYR APEdihe_aanoi APEdist_nnnn APE10-dihe-na 999.0, 999.0 APE9-dihe-na 999.0, 999.0 APE8-dihe-none 999.0, -176.92 APE8-rot-out 179.61 APE67-dihe-in -60.17, -32.19 -79.37, -19.94 APE12-dist-none 999.0 APE11-dist-none 999.0 APE10-dist-none 999.0 APE9-dist-none 999.0 A225S,D339A None None XRAY 2.591 0.23 0.261 B 347.0 265.0 38 27 16 11 [[198, 466]] 1.0 4pdp Saccharomyces cerevisiae CAMK_RAD53_YEAST CAMK 1e-76 264.0 3.0 256.0 254.0 338 339 340 342 344 227 244 248 316 318 317 319.0 390 365 360 359 358 357 356 355 354 274 Serine/threonine-protein kinase RAD53