PDB: 3O0G — CMGC CDK5_HUMAN

Total number of chains: 2
Active chains: 2
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% 3O0GA
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
CMGC CDK5 CDK5_HUMAN 3O0GA Q00535 1 289 292.0 No_ligand No_ligand Active DFGin 6.8294 15.2178 BLAminus -136.42, 175.77 61.32, 76.52 -94.77, 26.39 279.12, 71.78 -74.78, -15.11 in-in in 8.7244 Saltbr-in 2.5526 HRD-in -79.72, -52.16 68.31, 13.14 in-in-in SNCiii in-in ActLoopNT-in 2.9154 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -130.07, 157.29 APE9-dihe-na 70.83, 127.92 APE8-dihe-in -52.36, 134.76 APE8-rot-in 293.6 APE67-dihe-in -63.53, -19.46 -44.63, -48.78 APE12-dist-in 13.4692 APE11-dist-in 10.7286 APE10-dist-in 6.966 APE9-dist-in 3.2718 D144N None None XRAY 1.95 0.228 0.256 A 292.0 289.0 0 28 28 0 [[4, 286]] 1.0 3o0g CMGC_CDK5_HUMAN CMGC 8e-83 284.6 1.0 301.0 301.0 143 144 145 147 149 33 51 55 123 125 124 126.0 184 171 166 165 164 163 162 161 160 81 Cyclin-dependent kinase 5
CMGC CDK5 CDK5_HUMAN 3O0GB Q00535 6 288 292.0 3O0:293 Type1 Active DFGin 6.923 14.7947 BLAminus -129.48, 175.97 62.66, 84.26 -100.98, 30.43 284.37, 72.05 -63.02, -27.78 in-in in 8.8214 Saltbr-in 2.7631 HRD-in -83.72, -54.01 67.99, 17.3 in-in-in SNCiii in-in ActLoopNT-in 2.8557 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -132.49, 157.23 APE9-dihe-na 72.19, 128.42 APE8-dihe-in -53.83, 140.52 APE8-rot-in 308.29 APE67-dihe-in -61.77, -21.68 -45.86, -49.86 APE12-dist-in 12.7273 APE11-dist-in 9.9091 APE10-dist-in 6.3251 APE9-dist-in 3.248 D144N None None XRAY 1.95 0.228 0.256 B 292.0 264.0 21 28 28 0 [[4, 286]] 1.0 3o0g CMGC_CDK5_HUMAN CMGC 8e-83 284.6 1.0 301.0 301.0 143 144 145 147 149 33 51 55 123 125 124 126.0 184 171 166 165 164 163 162 161 160 81 Cyclin-dependent kinase 5

PDB: 3O0G — CMGC CDK5_HUMAN

Total number of chains: 2
Active chains: 2
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% 3O0GA
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
CMGC CDK5 CDK5_HUMAN 3O0GA Q00535 1 289 292.0 No_ligand No_ligand Active DFGin 6.8294 15.2178 BLAminus -136.42, 175.77 61.32, 76.52 -94.77, 26.39 279.12, 71.78 -74.78, -15.11 in-in in 8.7244 Saltbr-in 2.5526 HRD-in -79.72, -52.16 68.31, 13.14 in-in-in SNCiii in-in ActLoopNT-in 2.9154 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -130.07, 157.29 APE9-dihe-na 70.83, 127.92 APE8-dihe-in -52.36, 134.76 APE8-rot-in 293.6 APE67-dihe-in -63.53, -19.46 -44.63, -48.78 APE12-dist-in 13.4692 APE11-dist-in 10.7286 APE10-dist-in 6.966 APE9-dist-in 3.2718 D144N None None XRAY 1.95 0.228 0.256 A 292.0 289.0 0 28 28 0 [[4, 286]] 1.0 3o0g Homo sapiens CMGC_CDK5_HUMAN CMGC 8e-83 284.6 1.0 301.0 301.0 143 144 145 147 149 33 51 55 123 125 124 126.0 184 171 166 165 164 163 162 161 160 81 Cyclin-dependent kinase 5
CMGC CDK5 CDK5_HUMAN 3O0GB Q00535 6 288 292.0 3O0:293 Type1 Active DFGin 6.923 14.7947 BLAminus -129.48, 175.97 62.66, 84.26 -100.98, 30.43 284.37, 72.05 -63.02, -27.78 in-in in 8.8214 Saltbr-in 2.7631 HRD-in -83.72, -54.01 67.99, 17.3 in-in-in SNCiii in-in ActLoopNT-in 2.8557 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -132.49, 157.23 APE9-dihe-na 72.19, 128.42 APE8-dihe-in -53.83, 140.52 APE8-rot-in 308.29 APE67-dihe-in -61.77, -21.68 -45.86, -49.86 APE12-dist-in 12.7273 APE11-dist-in 9.9091 APE10-dist-in 6.3251 APE9-dist-in 3.248 D144N None None XRAY 1.95 0.228 0.256 B 292.0 264.0 21 28 28 0 [[4, 286]] 1.0 3o0g Homo sapiens CMGC_CDK5_HUMAN CMGC 8e-83 284.6 1.0 301.0 301.0 143 144 145 147 149 33 51 55 123 125 124 126.0 184 171 166 165 164 163 162 161 160 81 Cyclin-dependent kinase 5

PDB: 3O0G — CMGC CDK5_HUMAN

Total number of chains: 0
Active chains: 0
Total number of genes: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name