PDB: 1PKG — TYR KIT_HUMAN

Total number of chains: 2
Active chains: 0
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% 1PKGA
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
TYR KIT KIT_HUMAN 1PKGA P10721 567 927 976.0 ADP:1480 ATPlike Inactive DFGin 6.4807 14.1365 BLAminus -130.56, -161.98 47.26, 79.76 -98.59, 34.29 290.92, 88.36 -71.71, -28.0 in-out in 8.1383 Saltbr-out 3.8827 HRD-in -70.61, -44.29 71.47, -6.33 out-in-out SNCoio in-out ActLoopNT-in 2.9813 ActLoopCT-out TYR APEdihe_oiiai APEdist_aaai APE10-dihe-out 81.05, 87.98 APE9-dihe-in -123.34, 167.37 APE8-dihe-in -84.87, 64.98 APE8-rot-na 27.08 APE67-dihe-in -64.22, -13.25 -46.84, -45.75 APE12-dist-na 14.8174 APE11-dist-na 9.099 APE10-dist-na 11.173 APE9-dist-in 6.8945 None PTR568,PTR570 PTR568,PTR570 XRAY 2.9 0.229 0.311 A 329.0 292.0 11 30 30 0 [[589, 926]] 1.0 1pkg TYR_KIT_HUMAN TYR 4.5e-102 346.9 1.0 260.0 260.0 809 810 811 813 815 623 640 644 789 791 790 792.0 851 839 834 833 832 831 830 829 828 671 Mast/stem cell growth factor receptor Kit
TYR KIT KIT_HUMAN 1PKGB P10721 566 929 976.0 ADP:1486 ATPlike None DFGin 6.5368 13.8185 BLAminus -133.94, -165.75 57.9, 93.59 -119.64, 36.22 290.23, 87.19 -80.39, -20.36 in-in in 6.9344 Saltbr-in 2.9154 HRD-in -72.14, -51.55 69.69, 17.19 in-in-none SNCiin in-none ActLoopNT-in 2.8877 ActLoopCT-none TYR APEdihe_niiai APEdist_aaai APE10-dihe-none 999.0, 110.55 APE9-dihe-in -141.29, 162.93 APE8-dihe-in -80.26, 78.25 APE8-rot-na 29.66 APE67-dihe-in -62.74, -24.13 -40.98, -43.63 APE12-dist-na 999.0 APE11-dist-na 999.0 APE10-dist-na 10.7652 APE9-dist-in 6.4939 None PTR568,PTR570 PTR568,PTR570 XRAY 2.9 0.229 0.311 B 329.0 279.0 27 30 17 13 [[589, 926]] 1.0 1pkg TYR_KIT_HUMAN TYR 4.5e-102 346.9 1.0 260.0 260.0 809 810 811 813 815 623 640 644 789 791 790 792.0 851 839 834 833 832 831 830 829 828 671 Mast/stem cell growth factor receptor Kit

PDB: 1PKG — TYR KIT_HUMAN

Total number of chains: 2
Active chains: 0
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% 1PKGA
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
TYR KIT KIT_HUMAN 1PKGA P10721 567 927 976.0 ADP:1480 ATPlike Inactive DFGin 6.4807 14.1365 BLAminus -130.56, -161.98 47.26, 79.76 -98.59, 34.29 290.92, 88.36 -71.71, -28.0 in-out in 8.1383 Saltbr-out 3.8827 HRD-in -70.61, -44.29 71.47, -6.33 out-in-out SNCoio in-out ActLoopNT-in 2.9813 ActLoopCT-out TYR APEdihe_oiiai APEdist_aaai APE10-dihe-out 81.05, 87.98 APE9-dihe-in -123.34, 167.37 APE8-dihe-in -84.87, 64.98 APE8-rot-na 27.08 APE67-dihe-in -64.22, -13.25 -46.84, -45.75 APE12-dist-na 14.8174 APE11-dist-na 9.099 APE10-dist-na 11.173 APE9-dist-in 6.8945 None PTR568,PTR570 PTR568,PTR570 XRAY 2.9 0.229 0.311 A 329.0 292.0 11 30 30 0 [[589, 926]] 1.0 1pkg Homo sapiens TYR_KIT_HUMAN TYR 4.5e-102 346.9 1.0 260.0 260.0 809 810 811 813 815 623 640 644 789 791 790 792.0 851 839 834 833 832 831 830 829 828 671 Mast/stem cell growth factor receptor Kit
TYR KIT KIT_HUMAN 1PKGB P10721 566 929 976.0 ADP:1486 ATPlike None DFGin 6.5368 13.8185 BLAminus -133.94, -165.75 57.9, 93.59 -119.64, 36.22 290.23, 87.19 -80.39, -20.36 in-in in 6.9344 Saltbr-in 2.9154 HRD-in -72.14, -51.55 69.69, 17.19 in-in-none SNCiin in-none ActLoopNT-in 2.8877 ActLoopCT-none TYR APEdihe_niiai APEdist_aaai APE10-dihe-none 999.0, 110.55 APE9-dihe-in -141.29, 162.93 APE8-dihe-in -80.26, 78.25 APE8-rot-na 29.66 APE67-dihe-in -62.74, -24.13 -40.98, -43.63 APE12-dist-na 999.0 APE11-dist-na 999.0 APE10-dist-na 10.7652 APE9-dist-in 6.4939 None PTR568,PTR570 PTR568,PTR570 XRAY 2.9 0.229 0.311 B 329.0 279.0 27 30 17 13 [[589, 926]] 1.0 1pkg Homo sapiens TYR_KIT_HUMAN TYR 4.5e-102 346.9 1.0 260.0 260.0 809 810 811 813 815 623 640 644 789 791 790 792.0 851 839 834 833 832 831 830 829 828 671 Mast/stem cell growth factor receptor Kit

PDB: 1PKG — TYR KIT_HUMAN

Total number of chains: 0
Active chains: 0
Total number of genes: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name