PDB: 1PKD — CMGC CDK2_HUMAN

Total number of chains: 2
Active chains: 1
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% 1PKDA
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
CMGC CDK2 CDK2_HUMAN 1PKDA P24941 1 296 298.0 UCN:60410 Type1 Inactive DFGin 6.5754 15.3869 BLAminus -133.85, 171.83 54.3, 84.1 -93.29, 24.7 280.02, 73.48 -58.68, -37.61 in-out in 8.8019 Saltbr-out 3.6599 HRD-in -78.55, -55.12 71.6, 20.95 out-in-in SNCoii in-in ActLoopNT-in 3.0331 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -141.48, 136.15 APE9-dihe-na 78.94, 132.36 APE8-dihe-in -52.7, 137.01 APE8-rot-in 296.12 APE67-dihe-in -63.8, -19.34 -42.25, -50.85 APE12-dist-in 13.145 APE11-dist-in 10.2175 APE10-dist-in 7.6467 APE9-dist-in 3.3799 None TPO160 TPO160 XRAY 2.3 0.218 0.268 A 297.0 296.0 0 28 28 0 [[4, 286]] 1.0 1pkd CMGC_CDK2_HUMAN CMGC 6.3e-90 307.9 1.0 301.0 301.0 144 145 146 148 150 33 51 55 124 126 125 127.0 185 172 167 166 165 164 163 162 161 81 Cyclin-dependent kinase 2
CMGC CDK2 CDK2_HUMAN 1PKDC P24941 1 296 298.0 UCN:60411 Type1 Active DFGin 6.4625 15.3197 BLAminus -135.87, 172.38 57.28, 84.68 -94.13, 24.13 279.18, 73.79 -65.7, -30.17 in-in in 8.6325 Saltbr-in 3.4814 HRD-in -72.06, -56.98 67.33, 21.98 in-in-in SNCiii in-in ActLoopNT-in 2.8349 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -142.36, 142.06 APE9-dihe-na 67.64, 128.7 APE8-dihe-in -51.48, 131.97 APE8-rot-in 292.97 APE67-dihe-in -55.98, -21.1 -45.12, -49.62 APE12-dist-in 12.786 APE11-dist-in 9.6944 APE10-dist-in 7.5104 APE9-dist-in 3.479 None TPO160 TPO160 XRAY 2.3 0.218 0.268 C 297.0 296.0 0 28 28 0 [[4, 286]] 1.0 1pkd CMGC_CDK2_HUMAN CMGC 6.3e-90 307.9 1.0 301.0 301.0 144 145 146 148 150 33 51 55 124 126 125 127.0 185 172 167 166 165 164 163 162 161 81 Cyclin-dependent kinase 2

PDB: 1PKD — CMGC CDK2_HUMAN

Total number of chains: 2
Active chains: 1
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% 1PKDA
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
CMGC CDK2 CDK2_HUMAN 1PKDA P24941 1 296 298.0 UCN:60410 Type1 Inactive DFGin 6.5754 15.3869 BLAminus -133.85, 171.83 54.3, 84.1 -93.29, 24.7 280.02, 73.48 -58.68, -37.61 in-out in 8.8019 Saltbr-out 3.6599 HRD-in -78.55, -55.12 71.6, 20.95 out-in-in SNCoii in-in ActLoopNT-in 3.0331 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -141.48, 136.15 APE9-dihe-na 78.94, 132.36 APE8-dihe-in -52.7, 137.01 APE8-rot-in 296.12 APE67-dihe-in -63.8, -19.34 -42.25, -50.85 APE12-dist-in 13.145 APE11-dist-in 10.2175 APE10-dist-in 7.6467 APE9-dist-in 3.3799 None TPO160 TPO160 XRAY 2.3 0.218 0.268 A 297.0 296.0 0 28 28 0 [[4, 286]] 1.0 1pkd Homo sapiens CMGC_CDK2_HUMAN CMGC 6.3e-90 307.9 1.0 301.0 301.0 144 145 146 148 150 33 51 55 124 126 125 127.0 185 172 167 166 165 164 163 162 161 81 Cyclin-dependent kinase 2
CMGC CDK2 CDK2_HUMAN 1PKDC P24941 1 296 298.0 UCN:60411 Type1 Active DFGin 6.4625 15.3197 BLAminus -135.87, 172.38 57.28, 84.68 -94.13, 24.13 279.18, 73.79 -65.7, -30.17 in-in in 8.6325 Saltbr-in 3.4814 HRD-in -72.06, -56.98 67.33, 21.98 in-in-in SNCiii in-in ActLoopNT-in 2.8349 ActLoopCT-in nonTYR APEdihe_aaiii APEdist_iiii APE10-dihe-na -142.36, 142.06 APE9-dihe-na 67.64, 128.7 APE8-dihe-in -51.48, 131.97 APE8-rot-in 292.97 APE67-dihe-in -55.98, -21.1 -45.12, -49.62 APE12-dist-in 12.786 APE11-dist-in 9.6944 APE10-dist-in 7.5104 APE9-dist-in 3.479 None TPO160 TPO160 XRAY 2.3 0.218 0.268 C 297.0 296.0 0 28 28 0 [[4, 286]] 1.0 1pkd Homo sapiens CMGC_CDK2_HUMAN CMGC 6.3e-90 307.9 1.0 301.0 301.0 144 145 146 148 150 33 51 55 124 126 125 127.0 185 172 167 166 165 164 163 162 161 81 Cyclin-dependent kinase 2

PDB: 1PKD — CMGC CDK2_HUMAN

Total number of chains: 0
Active chains: 0
Total number of genes: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name